bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_0010_orf5
Length=147
Score E
Sequences producing significant alignments: (Bits) Value
Hs22052008 28.9 3.8
Hs18550690 28.5 4.5
> Hs22052008
Length=480
Score = 28.9 bits (63), Expect = 3.8, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 0/37 (0%)
Query 86 YTSVPPDPKHPSMRSLAPEAAAAAVSTHLLSCCCCGV 122
Y P+P PS++ + PE+ + A+ HL+ C V
Sbjct 336 YLQTLPEPILPSLQKIYPESFSPAIQLHLVHQAPCNV 372
> Hs18550690
Length=630
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 10/52 (19%)
Query 34 VCPPPQLLQLGCLYTSSAAAPEVPVHLKSCCSWGVYTPQHLLRLLLLQLGCL 85
VCPPP +Q G PEVPVH SW R L CL
Sbjct 400 VCPPPTQIQ-GWRGAPGRVRPEVPVHPSDNQSW---------RFTLRGFSCL 441
Lambda K H
0.325 0.137 0.474
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1785281974
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40