bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_6613_orf2
Length=91
Score E
Sequences producing significant alignments: (Bits) Value
CE06755 30.4 0.79
CE10402 28.5 3.0
7301305 28.1 4.3
HsM10835179 27.7 4.9
Hs21361195 27.7 5.1
CE07165 27.3 7.9
> CE06755
Length=980
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query 32 KEQPHYYQQRALNTSCTTQQVPMQHFLESKHQLQLFISTRVHESHFTL 79
KEQP + A+N + + Q +P++H L S++ L + R+ E TL
Sbjct 363 KEQP---MKMAINIAASLQYIPIEHILSSRYLLTKYEPERIKELLSTL 407
> CE10402
Length=1067
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query 32 KEQPHYYQQRALNTSCTTQQVPMQHFLESKHQLQLFISTRVHE 74
KEQP A+N + + Q +P +H L S++ L + R+ E
Sbjct 449 KEQP---MTMAINVAASLQYIPFEHILSSRYLLTKYEPERIKE 488
> 7301305
Length=759
Score = 28.1 bits (61), Expect = 4.3, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query 12 LCDCPCDIPETLLQKQMSSRKEQPHYYQQRALNTSCTTQ----QVPMQHFLESKHQLQLF 67
LCD DI +L K+ SR+ +Y+ AL C Q ++ M + L SK ++
Sbjct 428 LCDSLEDITHSLCTKEFQSRRSS-YYWLCNALGIYCPVQWEYGRLNMNYALVSKRKIAKL 486
Query 68 ISTRV 72
I+ ++
Sbjct 487 ITEQI 491
> HsM10835179
Length=406
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query 21 ETLLQKQMSSRKEQPHYYQQRALNTSCTTQQVPMQ 55
ET+++ M SR++Q HY R N SC VP Q
Sbjct 228 ETVVRVPMMSREDQYHYLLDR--NLSCRVVGVPYQ 260
> Hs21361195
Length=406
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query 21 ETLLQKQMSSRKEQPHYYQQRALNTSCTTQQVPMQ 55
ET+++ M SR++Q HY R N SC VP Q
Sbjct 228 ETVVRVPMMSREDQYHYLLDR--NLSCRVVGVPYQ 260
> CE07165
Length=290
Score = 27.3 bits (59), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query 19 IPETLLQKQMSSRKEQPHYYQQRALNTS-CTTQQVPMQHFLESKHQLQLFISTRVHESHF 77
+PET L+KQ+ + P Y Q + + CTT +V +E+ L T + +S
Sbjct 101 VPETALEKQIFEMERNPKLYTQLIITSKRCTTIEV-----VENLRNLPEI--TEIIDSTS 153
Query 78 TLQRAETNTPFE 89
L++ E + PF+
Sbjct 154 PLEKLELDWPFD 165
Lambda K H
0.321 0.132 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1174483934
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40