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GenSeed - A seed-driven progressive assembly program

Supplementary Material - T. gondii rhoptry proteome data analysis

Bradley et al. (2005) described a set of 100 peptide tags of rhoptry proteins of T. gondii, varying from 7 to 35 amino acid residues (average of 13 aa). We decided to use these tags as seeds against a T. gondii database composed by 129,421 unclustered EST sequences from the NCBI site.


 © 2007 - Arthur Gruber & Tiago J.P. Sobreira