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  Contributed Papers: Oral Presentations
Genomics and Post-genomics


MOLECULAR AND PHYLOGENETIC FEATURES OF TWO DISTINCT dsRNA VIRUS FAMILIES INFECTING Eimeria SPP. OF DOMESTIC FOWL


J.S. Fraga1, P.M.A. Zanotto2, S. Fernandez2, A.M. Katsuyama1 & A. Gruber1,*
1Faculty of Veterinary Medicine and Zootechny, 2Institute of Biomedical Sciences, University of São Paulo, Brazil.
*argruber@usp.br

Virus-like particles (VLPs) classified in the Totiviridae family have been described in distinct protozoan hosts. Here we report the complete genome sequencing of five distinct viruses of E. brunetti, E. maxima, E. mitis and E. praecox. A comparative analysis permitted to classify them into two groups: Group 1, composed by Eb-RV1, Ep-RV1 and Emt-RV1, presenting a genome size of 5.3-6.2 kb; and group 2, composed by Ep-RV2 and Em-RV1, with a genome size of 4.2-4.3 kb. Cesium chloride gradients of parasite lysates were performed and fractions containing dsRNA bands were analyzed by electron microscopy (EM). Group 1 revealed icosaedric particles similar to the morphology of Totiviridae. Despite experimental evidences that Group 2 dsRNA genomes are encapsidated, we were not able to evidentiate viral particles by EM. Finally, 0.7 kb dsRNA bands were also observed in co-infection with two distinct Group 1 Eimeria viruses. These small elements are encapsidated and may correspond to satellite viruses. Similarity searches of Group 1 sequences showed significant hits to Totiviridade, whereas Group 2 sequences presented only a small similarity block to an unclassified virus of Zygosaccharomyces bailii. No similarity was observed between viruses of groups 1 and 2. Thus, Group 2 viruses may represent a novel family of protozoan viruses. Phylogenetic inference of Group 1 viruses confirmed that these viruses constitute a monophyletic group and are more closely related to fungal viruses than to other protozoan viruses. These results may suggest that a progenitor of these viruses might have been a non-infectious virus of a cell type that predated the differentiation of protozoa and fungi. However, the finding of two distinct and non-related virus groups, infecting the same protozoan host cells, may provide evidence that more than one single progenitor may have originated the viruses currently found in Eimeria.

Financial support: FAPESP and CNPq

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