TRAP (Tandem Repeats Analysis Program) TRF Version 4.00 Sequence: CHROMOSOME_IV Parameters: 2 5 7 80 10 25 1000 Pmatch=0.80,Pindel=0.10 tuple sizes 0,4,5,7 tuple distances 0, 29, 159, 1000 Length: 17493785 ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33 Found at i: i:2923416 original size:11 final size:11 Alignment explanation
Indices: 2923394--2923416 Score: 32 Period size: 11 Copynumber: 2.1 Consensus size: 11 2923384 AAAATCAATC * 2923394 ATTTTAGCGCA 1 ATTTTAGAGCA * 2923405 ATTTTGGAGCA 1 ATTTTAGAGCA 2923416 A 1 A 2923417 AAATCGAAAA Statistics Matches: 10, Mismatches: 2, Indels: 0 0.83 0.17 0.00 Matches are distributed among these distances: 11 10 1.00 ACGTcount: A:0.30, C:0.13, G:0.22, T:0.35 Consensus pattern (11 bp): ATTTTAGAGCA Left flanking sequence: Indices 2922894 -- 2923393 CAATTTATTGGAAGTTCGTAAGGGGGCGGGAAAAGGCGGGACAAAGAGCAGGCTGAGAGAATTTC GAATTTTTTTTTGTTTGATGTGATTTTTTGTAGTTGTTCTAGAGGCGAGCTTCGGAGACGATCAG GCTTCTGAAAAAAAATTATTAATTTATTTTTTAAATTGTTAAAAAAAATTTATTAAAATGCATAT TTATTGTTGGGTCCCACAGCGAAAACTAGGAAAATCTACTGTTTTCAGAGCCGAAATCGAAAATT CGAAGGGTCGATTTACGCAGCCCGTGTACTCCTCGAGGAGAAGTGGGAATGATTTTTATACAGTT TTTTAACATTAAAACTACCAAAAAAATGGCTCATAAATTCAATTTCCAGCTGAAAACTGCTTTTA AGACACTAAATACTTCGATTTTCACTGAAAAACTGGAATTTAGCGCTAAAGTTGTTATAGTTATG TAAAATTTGTGGAAAAGTCGATGCGAAAACGGTCCAAAATCAATC Right flanking sequence: Indices 2923417 -- 2923916 AAATCGAAAAATCGAACTAGAAACCTCCGAAATTGGCACATGTCGATTTACGCAGCTCGTGTACT CCCCGCGGAGAAGAGGGGTGAAGCACATGGATTTTGAGGCGAAAATTGTTGATGTTGGCCTATTT TTTCCTGATTTGAATCTTTAAATCACCAATTTAGGTCTAAATTATAGTGTTTCTGATAAATTTTT ATTTTCGATTTTTTAAAGGTTGAAAAACTAAAAAAAATTCGAAAATAAAAATTTATCAAAAAAGC TATAATTCCGAGCAAAAATTGATGATTTAAACGTTCAAATTAGAAAAAATAGGCCAAAATCAATA ATTTTCACCTTAAAACCCGTTTTTTTCACCCCCACTTCTCCTCGGGGAGTACACGAGTTGACGTA AATCGACATGCGCCAATTTCAGGGATTTTTAGTTCGATTTTTCGATTTTGGCTCCATAATTGCGC TAAAAGTATTGTTTTTCGCCGTTTTCGTCGACTTTTCCTGAAATT Found at i:2923918 original size:11 final size:11 Alignment explanation
Indices: 2923904--2923926 Score: 32 Period size: 11 Copynumber: 2.1 Consensus size: 11 2923894 TTTCGTCGAC * 2923904 TTTTCCTGAAA 1 TTTTACTGAAA * 2923915 TTTTACTTAAA 1 TTTTACTGAAA 2923926 T 1 T 2923927 ATAGCAAATT Statistics Matches: 10, Mismatches: 2, Indels: 0 0.83 0.17 0.00 Matches are distributed among these distances: 11 10 1.00 ACGTcount: A:0.30, C:0.13, G:0.04, T:0.52 Consensus pattern (11 bp): TTTTACTGAAA Left flanking sequence: Indices 2923404 -- 2923903 AATTTTGGAGCAAAAATCGAAAAATCGAACTAGAAACCTCCGAAATTGGCACATGTCGATTTACG CAGCTCGTGTACTCCCCGCGGAGAAGAGGGGTGAAGCACATGGATTTTGAGGCGAAAATTGTTGA TGTTGGCCTATTTTTTCCTGATTTGAATCTTTAAATCACCAATTTAGGTCTAAATTATAGTGTTT CTGATAAATTTTTATTTTCGATTTTTTAAAGGTTGAAAAACTAAAAAAAATTCGAAAATAAAAAT TTATCAAAAAAGCTATAATTCCGAGCAAAAATTGATGATTTAAACGTTCAAATTAGAAAAAATAG GCCAAAATCAATAATTTTCACCTTAAAACCCGTTTTTTTCACCCCCACTTCTCCTCGGGGAGTAC ACGAGTTGACGTAAATCGACATGCGCCAATTTCAGGGATTTTTAGTTCGATTTTTCGATTTTGGC TCCATAATTGCGCTAAAAGTATTGTTTTTCGCCGTTTTCGTCGAC Right flanking sequence: Indices 2923927 -- 2924426 ATAGCAAATTTAGCCGTAAATTACAGTGTTTTCCGTGAAAATCGATATTTTTAGTGGCGTAAAAG CAGTTTTCGGCTGGAAATCGGATTTACGAGCCATTTTTTGATAGTTTTAATGTTAAAAAGGTCAA AAACTGTATAAAAATCATTCCAACTTCTCCTCGGGGAGTACACGATCGGCGTAAATCGACATGAG GTCGAATTTTCGATTTTGGCTTCAAAAGAATTGCAAATTTTCATCGATTTCGTGGCGAGACCCTA GATATATTACTGACGAGCATAGTTCATCGTCCATTGTTTTGCAGTCTTAATCGCCTCGGCCTCAT TCGTTTTCCATTGCTCGGCGACATCAGTTGCCAGTGGATCTTCCGGATTTGGAGCCGAAAGAAGA GCCTGAATCGACAGAAGAACCGTGCGAATTTGAAGAGCCGGCGACCATTTATCTGAAAAATTGGG CATTTTTTTTCGAGAAATTCATGTGAAAAAGCTCAAAATGAGCAG Found at i:2925371 original size:12 final size:12 Alignment explanation
Indices: 2925354--2925389 Score: 44 Period size: 12 Copynumber: 3.0 Consensus size: 12 2925344 CTAAAAACCG 2925354 TTTTTTAAAAAA 1 TTTTTTAAAAAA * ** 2925366 TTTTTTCACTAA 1 TTTTTTAAAAAA * 2925378 TTTTTCAAAAAA 1 TTTTTTAAAAAA 2925390 AGGGGAAAAT Statistics Matches: 17, Mismatches: 7, Indels: 0 0.71 0.29 0.00 Matches are distributed among these distances: 12 17 1.00 ACGTcount: A:0.42, C:0.08, G:0.00, T:0.50 Consensus pattern (12 bp): TTTTTTAAAAAA Left flanking sequence: Indices 2924854 -- 2925353 CATTTTCGCAGTTTCTTTGAAAAAAATTTCACAAAAAGAGGGTTTTTTAAAATTAAATTTCGAGA AATTCGCATTCGAATGCACCTAAATATATTTATTAGAACAAAAAAAAACACGATTTTTCTCGAAA TTTCGTCTATTTTGTCAAAAAACGCTCAAAATAAGCTGTTTTTGATCCATTTTTCCCATTAAAAT GCGTAAAAATTCATATTTTTTGGATTATTTTCTCATTATGCGAAAAATGAGCATGAAATTCGGAT TTATACGCTCAAAAAGAGCTAAATTTGATTTAAATATTAAAAAATACAAAAAATTCATCTAAACT CGTGAATATTGTTGAAAATGGGCTGTTTTTCGAAAAATTTCAAGTAAAAATATCCAAAAAAGCTA GATTTCTGAATTTTATCAATAAATTTGTGTTAAAACAGTGTAAAAATAGCAAATTTCGATGAAAA TTCAGAAAATTCTCTAAAAATAATTGATTAAAACGCTAAAAACCG Right flanking sequence: Indices 2925390 -- 2925889 AGGGGAAAATCTATTCACCCTTGAGAATATCGAGACAAATTCTGCCGAGTTTATCAATATTCGGA TGATAGATCTTTGTCATGAATCGAACTTTCGGTGCAGCCATCGGATACTCTTCCGGAAGGAAAAG CTCCAACTTGAAGACACCACCAGCAAATGGAGAATCGTCTGGCCCGGCTATCATGACATGGAAGT ATCTGGCGTTGCTCTCGTCTGGATTTGCCGATATTCCGGGAACCGGATCCGCGAGAAGTCGTTGT GTCTCTTTGATGATTCGACGCGGAAGTTGCCCGGCCATTCTGCAAGAAATTTTATTGTGTGTTTT GGGGCTTTTAAGCTGATTTTTCTATTAGAAAAACGGATTTTTGAGTGCAAAATGGTGAAAACTGA ATAAAAAAATATATATAAATGTATAAATTTTGGCTGAAATAAAAGAAAAAAGACTAATAATTCAA GGTTTTTTAATTAAAAATCAAAGTTTTTTCTCGAAATATCGGAAA Found at i:2928695 original size:12 final size:12 Alignment explanation
Indices: 2928674--2928699 Score: 38 Period size: 12 Copynumber: 2.2 Consensus size: 12 2928664 TAACGTTGAC 2928674 TTTTGGAATTAA 1 TTTTGGAATTAA * * 2928686 TTTTGTAATTTA 1 TTTTGGAATTAA 2928698 TT 1 TT 2928700 CGGGCTGATT Statistics Matches: 12, Mismatches: 2, Indels: 0 0.86 0.14 0.00 Matches are distributed among these distances: 12 12 1.00 ACGTcount: A:0.27, C:0.00, G:0.12, T:0.62 Consensus pattern (12 bp): TTTTGGAATTAA Left flanking sequence: Indices 2928174 -- 2928673 GTTGCGAGTGGTCTCACAATGCTCTCTGATCACTTTTCCGATGGCATCTGGCTTGGATTTGTCGC CGGCCGGCACTTTTGCCATCACATCGTCCAGAACCTTTTTGCAGACTGAAAATTTCGCGATTTTT TATTAGATAATTAAGTAATTAAGCTTTCTCAAATTTACAAACCTTCACATTGTGGAGCAGCAGCC GAGGCGACGACAATCACCAGGGAGATGAGAAGGACGAGTCGGCTCATCTGCTGGAAAAAACAGGG ATTATTACGGGGTTTTCAGGGCTCTGAGAGTGTAAATAGCGGGAAAACTGAAAAAAAAAACCAAC AAATTATGCAGAAAAATAGAATAAAAAGACAAAAGAAAGCGGAAAAAACGGAGAGAAAATAGAGA AAAAGCGAACGCAATTCGAGAAAATAAGCTGACGTGTTTGCGCGCACCGCGGGCGCGTCAGCACT CTCCTTGGCGCGTTTCTCGATGTGGACGTCAGCGTTAACGTTGAC Right flanking sequence: Indices 2928700 -- 2929199 CGGGCTGATTCGCAGTGAAAAACGATATTTTCCATTGAGAAAACCTCAAAAATAGTTAGAAAATC GTATTTTCCAACTAAAATTAGCATTAAAGATCGCGGGAAACATGAAAATTTGCATAAAACTTCAC TTTTTACAGGTTCGCAAAATTTAAAATAAAAATGTTTGAAAATCAGATTTTTTAAAAAATCTTTT CTTGGTCCAGAACGAAATTCAGGTCTCGCGTGGAAGGGATTTTAAAGTCGATTTGGCGGTTCCCG TGGAGATCGGGTCATGGTGCATCGATCAAAATACTTTCTTCTTGTATTATAGGTTTTGTACCATT TTCAGGGGGTTTTCCAGAATTTCCAGAACCAAAAAATCCAAGAATTACAAGAAAATTCGATTTGA AAACACTAAAAAGAAGAAAAAGCGATTTCGAATTCAAAACTACTACTGTAGAGGGGTACTGTAGT CTGAAAATTTGCACAGTTCGCGTTGGGAACACAATATATTCTATT Found at i:2931706 original size:13 final size:13 Alignment explanation
Indices: 2931681--2931708 Score: 42 Period size: 13 Copynumber: 2.2 Consensus size: 13 2931671 AAACAGGTGA * * 2931681 TTGTTCGATTTTT 1 TTGTTAGAATTTT 2931694 TTGTTAGAATTTT 1 TTGTTAGAATTTT 2931707 TT 1 TT 2931709 CAATTTTTAG Statistics Matches: 13, Mismatches: 2, Indels: 0 0.87 0.13 0.00 Matches are distributed among these distances: 13 13 1.00 ACGTcount: A:0.14, C:0.04, G:0.14, T:0.68 Consensus pattern (13 bp): TTGTTAGAATTTT Left flanking sequence: Indices 2931181 -- 2931680 TCCAGTGAAAAGTGCACAAACAAATGGTTCAAAATACCAAAAAGAGTATAATAATTCCCTTTCCT CCTATCTATATTTGCGTCTGTCTCTTCCACCCCATAGAAACAGTGCCCCCCCTACCACCGCCCGC TGTGTTGCTGCTTCGTGGCTTTTCGTCTCTGCTTCTTTCAATTCTCTCACTCTTTTCTTCTCTCC CATGCCACGCCCCCACCCGTTCCTATCTCTGATTCGGAATCTTTTGAAGGCGACGACGTGGTTCT TCGAAGCCGCCAGCAGCACTACTCATCAAGGAATCCATGTTCGTCGGCGTGTTTTACGGTCTTGC AGCCGTATGTGGCCTGCTCTATTTTTACACACGATCCGCCACCGAGTCAAACGATGATCCAAAGT TTAAGAGCTTCCAGAGAACCTATCTTATTGTGTATATGATGGCTGTTGGTAGGTTATTATTTTTT TAGTTTGGGGTTGCGGGGGATTTGGATTAGCGGGAAAACAGGTGA Right flanking sequence: Indices 2931709 -- 2932208 CAATTTTTAGACCTTTTTTAGACCTTTTTTAAACCAACAAAAAAGGTTAAAGTCGTTAAAAACCA CTCTTATAATGCTACAACGTCTAGAAATATCATTATAAAATTTTTCATAAAAATGTTGAAATTGT TTTATTTACAGTCAAAATGTGGTCAGTTTTAACTTATCATAATTAAGGGAGTCGACCAAAAAAAA TTTTCCTTTGACGATTTTATATATTGAATGCATTGAAAGCATTTGTATTCAAACATTCTAGGAGT TCTAGGAACTTGAAATTTCTCAAAAATTACATTTATTGGGAAATTTAGCAATTTACCAAAACTTT GACTGAAATATATTTAAAAAAAGCTAACTAAATTTTTTAAAAAGTTTAAAAAAATCCTAAAATTG GCTCCTCCCATAGCTTGGTTTTTGTGCTCAATTTTAATTATATTTTCCCTGAAGTTAAAAAAAAA AATCAAAGACCGAATCATTGTGTTAACATGAATAAAAAAAAAAGG Found at i:2931728 original size:11 final size:11 Alignment explanation
Indices: 2931712--2931743 Score: 57 Period size: 11 Copynumber: 2.9 Consensus size: 11 2931702 ATTTTTTCAA 2931712 TTTTTAGACCT 1 TTTTTAGACCT 2931723 TTTTTAGACCT 1 TTTTTAGACCT * 2931734 TTTTTAAACC 1 TTTTTAGACC 2931744 AACAAAAAAG Statistics Matches: 20, Mismatches: 1, Indels: 0 0.95 0.05 0.00 Matches are distributed among these distances: 11 20 1.00 ACGTcount: A:0.22, C:0.19, G:0.06, T:0.53 Consensus pattern (11 bp): TTTTTAGACCT Left flanking sequence: Indices 2931212 -- 2931711 AAATACCAAAAAGAGTATAATAATTCCCTTTCCTCCTATCTATATTTGCGTCTGTCTCTTCCACC CCATAGAAACAGTGCCCCCCCTACCACCGCCCGCTGTGTTGCTGCTTCGTGGCTTTTCGTCTCTG CTTCTTTCAATTCTCTCACTCTTTTCTTCTCTCCCATGCCACGCCCCCACCCGTTCCTATCTCTG ATTCGGAATCTTTTGAAGGCGACGACGTGGTTCTTCGAAGCCGCCAGCAGCACTACTCATCAAGG AATCCATGTTCGTCGGCGTGTTTTACGGTCTTGCAGCCGTATGTGGCCTGCTCTATTTTTACACA CGATCCGCCACCGAGTCAAACGATGATCCAAAGTTTAAGAGCTTCCAGAGAACCTATCTTATTGT GTATATGATGGCTGTTGGTAGGTTATTATTTTTTTAGTTTGGGGTTGCGGGGGATTTGGATTAGC GGGAAAACAGGTGATTGTTCGATTTTTTTGTTAGAATTTTTTCAA Right flanking sequence: Indices 2931744 -- 2932243 AACAAAAAAGGTTAAAGTCGTTAAAAACCACTCTTATAATGCTACAACGTCTAGAAATATCATTA TAAAATTTTTCATAAAAATGTTGAAATTGTTTTATTTACAGTCAAAATGTGGTCAGTTTTAACTT ATCATAATTAAGGGAGTCGACCAAAAAAAATTTTCCTTTGACGATTTTATATATTGAATGCATTG AAAGCATTTGTATTCAAACATTCTAGGAGTTCTAGGAACTTGAAATTTCTCAAAAATTACATTTA TTGGGAAATTTAGCAATTTACCAAAACTTTGACTGAAATATATTTAAAAAAAGCTAACTAAATTT TTTAAAAAGTTTAAAAAAATCCTAAAATTGGCTCCTCCCATAGCTTGGTTTTTGTGCTCAATTTT AATTATATTTTCCCTGAAGTTAAAAAAAAAAATCAAAGACCGAATCATTGTGTTAACATGAATAA AAAAAAAAGGATTTATTGTTAAAAACCACCAAACTTTTTTTTTCG Found at i:2935204 original size:11 final size:11 Alignment explanation
Indices: 2935188--2935224 Score: 37 Period size: 9 Copynumber: 3.5 Consensus size: 11 2935178 AAATTTAAAA 2935188 TTTTTCGATAT 1 TTTTTCGATAT * 2935199 TTTTTC-A-AC 1 TTTTTCGATAT * 2935208 TTTTTCTGATTT 1 TTTTTC-GATAT 2935220 TTTTT 1 TTTTT 2935225 TAATCTAAAG Statistics Matches: 20, Mismatches: 3, Indels: 5 0.71 0.11 0.18 Matches are distributed among these distances: 9 7 0.35 10 1 0.05 11 7 0.35 12 5 0.25 ACGTcount: A:0.14, C:0.11, G:0.05, T:0.70 Consensus pattern (11 bp): TTTTTCGATAT Left flanking sequence: Indices 2934688 -- 2935187 CCCATTAGGTCCCGGATGTCTGTCACTCTCTAACTATCAACACTCTCTGTACCGGTAATAGAGAC CACGTGGTGCCAGAGTGTCTCATTTTAGATTGATCTACTTTGATCTACAAAAAATGAGGGAGAAG AGACGCAGAGTTCTCTGTTAATTTCGCATGATTAAGAACGTGCTGACGTCACATTTTTTAGGCAC AAAATTCTCGAATTTTTTGTAGATCAAACCGTAATGGGACCGCCTGGCAATACGTGAGAGCCAGA TTTAGATTTTTTTTTTCATAAATAATAAAATTCTACTATTTTTCGGAAAAATCATACATTTTCTA CCATTAAAGGTGGAGTAGCGCCTGAGGAAAGTGTTCAAAACTTTGACCGGAAATTTTGAAAAATC TAAAATTTTTTGGAGTGTTTTATTATGATATTTGGTCGTTTTAGATTATTATAAATTTATTTAAA CAAAATTCCCACTGGCGCCCACCTTTAAAAAATTTAAATTTAAAA Right flanking sequence: Indices 2935225 -- 2935724 TAATCTAAAGTTCGTCAACTATTTTATAGCGAGATCAATCTAGACCGAAATACGTACGAGCACCG CCTCAGAGCACCGCCTTTCAGAAAAATTTCCGATTTTCTAATTTTTCTGAAAAACCAAAATTCCA TCGCTGTTTGATTTTTATATGTGACGTCACAATTTACACTCGTGACGTCACTCCTGATCGGCTCA ACAAATCAAAGTATTAGCCGAACAATTTGTGCAAACATTGTTTGAACAACTGCAAGCTTGAAGCC TAGACTATATTTGAAAAAAATGTAAAAAATACCCCAACTTCCAGATCCCAACGTATTCTGCCTTG GCCTTGTCCAATCGCTCTTCGAAGGATCCATGTACACATTCGTCTTGGAATGGACTCCAGCCCTG TCCCGAGCCGCTGGCGATGTCGGAATCCCGCATGGCTACATCTTCGCCGCATTCATGGTTGCTAC GATGATCGGATCCTCGGTCTTCAAGCTTCTTCAGCAACACGAACG Found at i:2937177 original size:11 final size:11 Alignment explanation
Indices: 2937144--2937182 Score: 43 Period size: 11 Copynumber: 3.6 Consensus size: 11 2937134 GATTTGGATC * * 2937144 GCGGCGTGAGG 1 GCGGCGTTAGA 2937155 GCGGCG-TAGA 1 GCGGCGTTAGA * 2937165 GCGGCGTTTGA 1 GCGGCGTTAGA * 2937176 GCGACGT 1 GCGGCGT 2937183 CGCATGGGAG Statistics Matches: 23, Mismatches: 4, Indels: 2 0.79 0.14 0.07 Matches are distributed among these distances: 10 8 0.35 11 15 0.65 ACGTcount: A:0.13, C:0.21, G:0.51, T:0.15 Consensus pattern (11 bp): GCGGCGTTAGA Left flanking sequence: Indices 2936644 -- 2937143 CAGTGTCGAGGAGGCCGAGAACTTGTGATTTGTGATATGTATCTGTACATTTTTAGACGATTTTT TTAAAATGAGTATTATGGGTTTCTCTTGTTCTATACGTATTCCATTCCATGTTTGTTTTTGCTGG TGATGCTACTATTTTTGTGATTTTAGAATTGGATAATGAAAAGTTATAAATTATTGTTATTTTTT AAGCGATTTTTCTGGTTCTTATTGTCAAAAAACGGCTCCTAGTTTTTGCATACGGATTTTTTTTT GAAATGAAACATGGATCTTTGAACGCAGAGAAGGAACTAGGGCTCCCATGCGGCGTCGCTCAAAC GCCGCTCCACGCCGCGATCCAAATCTTTAAAGCGATGCGCGGAACCCAAAAAGTGTCGGACGGGA GCCAAGTTTGCACCAAATAGTGCTGCTATAGGGTATGTCACTATTTGGTGCAAACTTGGATCCCG TCCGACACTTTTTGGGTTCCGCGCATCGCTTTAAAGATTTGGATC Right flanking sequence: Indices 2937183 -- 2937682 CGCATGGGAGCCCTAGATGGAACAATGTTAGGAGATTTCAAGTTGGTTTCCGCAACAGTGTAATC CAAAATCTACAGAAATCTTACTGTACCTTAGCGTACGCAACAGGGGTGTTCGGCAAATTTGCCGA GCACGGCAAATTTCAAAAAAGTAGATTTGCCGAATTTGCCGAGCTCGGCAAATTTCGAAATTTGC CGCACACGTAAAAAATTTGACAGTACAATTTTGACTAAAACTGTTGATTTTTTCGCCAAAAATTT AGTAAAGGGACGACAAATTGAGTTATTTTGATGTTTAAGCAGACACACTACACCTAACGTGTTCA GATACCAGAGGTGTGCTAACAATTCAGTAGTTTTGGTGCTCCATAAAACATCAAAAAATATGTAA TTTTTCCGAGTTTGTTAAGCACGGCAAATTTGTCAAATTTTTGATGTGTGCGGCAAATTTCAAAA TTTGCCGCACACCCCTGAATCGTGCAATATCAGCCTCAGACTTCA Found at i:2937801 original size:13 final size:13 Alignment explanation
Indices: 2937785--2937817 Score: 45 Period size: 11 Copynumber: 2.7 Consensus size: 13 2937775 AGTATATTAT 2937785 GTATGTATGTATA 1 GTATGTATGTATA 2937798 GTATGTA--TATA 1 GTATGTATGTATA * 2937809 GTATATATG 1 GTATGTATG 2937818 AAGTATACAA Statistics Matches: 17, Mismatches: 1, Indels: 4 0.77 0.05 0.18 Matches are distributed among these distances: 11 10 0.59 13 7 0.41 ACGTcount: A:0.33, C:0.00, G:0.21, T:0.45 Consensus pattern (13 bp): GTATGTATGTATA Left flanking sequence: Indices 2937285 -- 2937784 CAACAGGGGTGTTCGGCAAATTTGCCGAGCACGGCAAATTTCAAAAAAGTAGATTTGCCGAATTT GCCGAGCTCGGCAAATTTCGAAATTTGCCGCACACGTAAAAAATTTGACAGTACAATTTTGACTA AAACTGTTGATTTTTTCGCCAAAAATTTAGTAAAGGGACGACAAATTGAGTTATTTTGATGTTTA AGCAGACACACTACACCTAACGTGTTCAGATACCAGAGGTGTGCTAACAATTCAGTAGTTTTGGT GCTCCATAAAACATCAAAAAATATGTAATTTTTCCGAGTTTGTTAAGCACGGCAAATTTGTCAAA TTTTTGATGTGTGCGGCAAATTTCAAAATTTGCCGCACACCCCTGAATCGTGCAATATCAGCCTC AGACTTCACAATCAGACAATTTGGTTATGTTATTTCTGTTAAAAGTGGCAAAAATGTGACAAACA CTTCGAAGAGCGCTAACTTGAAGTATGAAGTATGAAGTATATTAT Right flanking sequence: Indices 2937818 -- 2938317 AAGTATACAACACTAACACACCTCCACTGAGACTAGGCTCATGTAGGGGCAAATTTACAAAATTC TTTATTCTAAGATCATCAGGGACCACATACTTGGTGAAAGTATGGGTGAATGAATACAAAATTCT TTATTCGAAGTAAGTTCTAATGGGCTCTTTTTTCCGAGTTTACGCCTTGACAAATTGTTTGATCG ATTCCTTGTCAGCTTTTGCACCATCCGCGTTCGGATTGTTTGCGATAGCAGGAGCAGTTTTAGCC TTAGCAGTTGCTGGAAGTGGAGGTGGAAGCATTTGTTGGAAGGATATCTGAAAATTCAAGTTTTA TACGTAGGCCCATAGGCACTCTAAGCAGACATTCTTACCTCCAAGTTAGCATTCAGGCAAACAAC GGCGGCCGCGTTGGTAAATTGAGCACAGTAGTTGGGCACCGAGAAAACTGTGATCAAACGGCGTC CGGTCATCATTTCATATCCGTCTTGTACAACTTGATGAGCACGAA Found at i:2937810 original size:11 final size:11 Alignment explanation
Indices: 2937790--2937824 Score: 42 Period size: 11 Copynumber: 3.2 Consensus size: 11 2937780 ATTATGTATG * 2937790 TATGTATAGTA 1 TATATATAGTA * 2937801 TGTATATAGTA 1 TATATATAGTA ** 2937812 TATATGAAGTA 1 TATATATAGTA 2937823 TA 1 TA 2937825 CAACACTAAC Statistics Matches: 19, Mismatches: 5, Indels: 0 0.79 0.21 0.00 Matches are distributed among these distances: 11 19 1.00 ACGTcount: A:0.40, C:0.00, G:0.17, T:0.43 Consensus pattern (11 bp): TATATATAGTA Left flanking sequence: Indices 2937290 -- 2937789 GGGGTGTTCGGCAAATTTGCCGAGCACGGCAAATTTCAAAAAAGTAGATTTGCCGAATTTGCCGA GCTCGGCAAATTTCGAAATTTGCCGCACACGTAAAAAATTTGACAGTACAATTTTGACTAAAACT GTTGATTTTTTCGCCAAAAATTTAGTAAAGGGACGACAAATTGAGTTATTTTGATGTTTAAGCAG ACACACTACACCTAACGTGTTCAGATACCAGAGGTGTGCTAACAATTCAGTAGTTTTGGTGCTCC ATAAAACATCAAAAAATATGTAATTTTTCCGAGTTTGTTAAGCACGGCAAATTTGTCAAATTTTT GATGTGTGCGGCAAATTTCAAAATTTGCCGCACACCCCTGAATCGTGCAATATCAGCCTCAGACT TCACAATCAGACAATTTGGTTATGTTATTTCTGTTAAAAGTGGCAAAAATGTGACAAACACTTCG AAGAGCGCTAACTTGAAGTATGAAGTATGAAGTATATTATGTATG Right flanking sequence: Indices 2937825 -- 2938324 CAACACTAACACACCTCCACTGAGACTAGGCTCATGTAGGGGCAAATTTACAAAATTCTTTATTC TAAGATCATCAGGGACCACATACTTGGTGAAAGTATGGGTGAATGAATACAAAATTCTTTATTCG AAGTAAGTTCTAATGGGCTCTTTTTTCCGAGTTTACGCCTTGACAAATTGTTTGATCGATTCCTT GTCAGCTTTTGCACCATCCGCGTTCGGATTGTTTGCGATAGCAGGAGCAGTTTTAGCCTTAGCAG TTGCTGGAAGTGGAGGTGGAAGCATTTGTTGGAAGGATATCTGAAAATTCAAGTTTTATACGTAG GCCCATAGGCACTCTAAGCAGACATTCTTACCTCCAAGTTAGCATTCAGGCAAACAACGGCGGCC GCGTTGGTAAATTGAGCACAGTAGTTGGGCACCGAGAAAACTGTGATCAAACGGCGTCCGGTCAT CATTTCATATCCGTCTTGTACAACTTGATGAGCACGAATGATGAG Found at i:2939520 original size:11 final size:11 Alignment explanation
Indices: 2939487--2939524 Score: 39 Period size: 11 Copynumber: 3.4 Consensus size: 11 2939477 AGCTCACAGC * * 2939487 GCCTAACGCGC 1 GCCTAACTCGT * 2939498 GCCTACCTTCGT 1 GCCTAAC-TCGT * 2939510 GCCTAGCTCGT 1 GCCTAACTCGT 2939521 GCCT 1 GCCT 2939525 GCCTTCAGGC Statistics Matches: 22, Mismatches: 4, Indels: 2 0.79 0.14 0.07 Matches are distributed among these distances: 11 14 0.64 12 8 0.36 ACGTcount: A:0.11, C:0.42, G:0.24, T:0.24 Consensus pattern (11 bp): GCCTAACTCGT Left flanking sequence: Indices 2938987 -- 2939486 CCGAATAATCGAAATAATCTCGTGGCCAGTCATCACGTTACAAATATTGATATTTGAGTTGTTGT ACAGAGAATTCATCCGTTTGATACAATCATCCATCCATTCTGCACACTTTGGGTCTGCTTTAGCC AAATCCAATCTTGCTGATTCTCTACTTGGACCCTCTGAAATTGGTACAACTTTAACTTTAGAATA AAATCCTGTCTTGTGCCTACTTTATGCCTACCTACCAGCTTGCCTACCTAATATCAACCTCGTGC CTACTGCACGCCTGCCTTACATCTGCCTACCATACTGCTTATATTATTCCTATAACATGCCTGCG GCGTGCCTGCCCGCCCGCATATACCTATTTTCGTGCTTACTTTCCTGATTGCCAGTCCAAGCACT TGCCTGTCACATACCTATCTCGCTATCTCGCCGCCTAAATTAATGTGTATTCAATTCCTGCCTAC GCACCTGCTTTCGCCTAATATGTGCCTGTGTTGGTAGCTCACAGC Right flanking sequence: Indices 2939525 -- 2940024 GCCTTCAGGCATGTCTTATGATGGCAAAACTCCTCTCAACAAGCCAACCTCATACCTGTCTACGC ACCTGCCGCATGCCTATTTTCTAACTATATGCCTACGCACAATCATTGTGCCTACCTTGCATCTG CTTAATTCGCCTGACTTCGCGATAGGCTGACGTCTGCCAACACGCCTGCTTTATGCCCCTTGCGT GCCTTCCGGCGAACCCTGCGCATGCCTGGCAATCTGGCCTACCTGCTTGCCTACCTCAAAACTGG TAGCATGCAGGTTGGCCGGTAGACTTTTCACTCACCTCTTGATCCTGATACGTTGCTACTGTCAT CTGCACTCATCTTTGAAAGTGTTGCTCTATTGGCAAATTGTCGATTCTTTTTTATCGATTATTTT ATTGAGAACTGATTTGAATACGGAGATTTTTCCACAAAACGACAACAAAAGAAAAGGTCAATAGG GTATAAAAATGCTATCACGTGAATTTATTCAAAACTTTTTTAAAA Found at i:2940056 original size:12 final size:12 Alignment explanation
Indices: 2940041--2940066 Score: 38 Period size: 12 Copynumber: 2.2 Consensus size: 12 2940031 ACAAAAATGA 2940041 AAATACATTTTT 1 AAATACATTTTT ** 2940053 AAATATTTTTTT 1 AAATACATTTTT 2940065 AA 1 AA 2940067 TTATTTCCGC Statistics Matches: 12, Mismatches: 2, Indels: 0 0.86 0.14 0.00 Matches are distributed among these distances: 12 12 1.00 ACGTcount: A:0.42, C:0.04, G:0.00, T:0.54 Consensus pattern (12 bp): AAATACATTTTT Left flanking sequence: Indices 2939541 -- 2940040 TATGATGGCAAAACTCCTCTCAACAAGCCAACCTCATACCTGTCTACGCACCTGCCGCATGCCTA TTTTCTAACTATATGCCTACGCACAATCATTGTGCCTACCTTGCATCTGCTTAATTCGCCTGACT TCGCGATAGGCTGACGTCTGCCAACACGCCTGCTTTATGCCCCTTGCGTGCCTTCCGGCGAACCC TGCGCATGCCTGGCAATCTGGCCTACCTGCTTGCCTACCTCAAAACTGGTAGCATGCAGGTTGGC CGGTAGACTTTTCACTCACCTCTTGATCCTGATACGTTGCTACTGTCATCTGCACTCATCTTTGA AAGTGTTGCTCTATTGGCAAATTGTCGATTCTTTTTTATCGATTATTTTATTGAGAACTGATTTG AATACGGAGATTTTTCCACAAAACGACAACAAAAGAAAAGGTCAATAGGGTATAAAAATGCTATC ACGTGAATTTATTCAAAACTTTTTTAAAAATTAAAACAAAAATGA Right flanking sequence: Indices 2940067 -- 2940566 TTATTTCCGCATAGTATAATTGCCTACCTACCTATCTACCTACCTACCGACCTACCTACATACCT ACCTACCTACCTACCTACCTACCTACCTACCTACCTACCTACCTACCTACCTACCTACCTACCTA CCCACCTACCTACCTACCTACCTAACTAATGGCTTTTAAACAAAAGGAATTTTGTGCATTTTGTG TCGTCAGAATCTCTAATGCCAACTTGCTCAATTAATCCCAGCTTTTTTTTTCTTCCTCTGCAATT ACAGAATTTTTTTCCGAGGAAGTCATGTTGACTTATTCCTATTTTTAAGCGGGTCCTAATCTTCA GCCACATAAGAGTTCCGTTCAAAATAGGCGGTCTGAAGCAGCAAAAATCTCATTCTCATGTGCGT GCGCCCAAGTTGTTGAACCAAAAAAGCTGGAAAACACACCAACACACACACAGTTCCTCTGGATG ACTTCCGGGAGCCCGTATGGAGCATATATCCGAATAAGACCCCCC Found at i:2940071 original size:12 final size:12 Alignment explanation
Indices: 2940048--2940072 Score: 43 Period size: 12 Copynumber: 2.1 Consensus size: 12 2940038 TGAAAATACA 2940048 TTTTTAAATATT 1 TTTTTAAATATT * 2940060 TTTTTAATTATT 1 TTTTTAAATATT 2940072 T 1 T 2940073 CCGCATAGTA Statistics Matches: 12, Mismatches: 1, Indels: 0 0.92 0.08 0.00 Matches are distributed among these distances: 12 12 1.00 ACGTcount: A:0.28, C:0.00, G:0.00, T:0.72 Consensus pattern (12 bp): TTTTTAAATATT Left flanking sequence: Indices 2939548 -- 2940047 GCAAAACTCCTCTCAACAAGCCAACCTCATACCTGTCTACGCACCTGCCGCATGCCTATTTTCTA ACTATATGCCTACGCACAATCATTGTGCCTACCTTGCATCTGCTTAATTCGCCTGACTTCGCGAT AGGCTGACGTCTGCCAACACGCCTGCTTTATGCCCCTTGCGTGCCTTCCGGCGAACCCTGCGCAT GCCTGGCAATCTGGCCTACCTGCTTGCCTACCTCAAAACTGGTAGCATGCAGGTTGGCCGGTAGA CTTTTCACTCACCTCTTGATCCTGATACGTTGCTACTGTCATCTGCACTCATCTTTGAAAGTGTT GCTCTATTGGCAAATTGTCGATTCTTTTTTATCGATTATTTTATTGAGAACTGATTTGAATACGG AGATTTTTCCACAAAACGACAACAAAAGAAAAGGTCAATAGGGTATAAAAATGCTATCACGTGAA TTTATTCAAAACTTTTTTAAAAATTAAAACAAAAATGAAAATACA Right flanking sequence: Indices 2940073 -- 2940572 CCGCATAGTATAATTGCCTACCTACCTATCTACCTACCTACCGACCTACCTACATACCTACCTAC CTACCTACCTACCTACCTACCTACCTACCTACCTACCTACCTACCTACCTACCTACCTACCCACC TACCTACCTACCTACCTAACTAATGGCTTTTAAACAAAAGGAATTTTGTGCATTTTGTGTCGTCA GAATCTCTAATGCCAACTTGCTCAATTAATCCCAGCTTTTTTTTTCTTCCTCTGCAATTACAGAA TTTTTTTCCGAGGAAGTCATGTTGACTTATTCCTATTTTTAAGCGGGTCCTAATCTTCAGCCACA TAAGAGTTCCGTTCAAAATAGGCGGTCTGAAGCAGCAAAAATCTCATTCTCATGTGCGTGCGCCC AAGTTGTTGAACCAAAAAAGCTGGAAAACACACCAACACACACACAGTTCCTCTGGATGACTTCC GGGAGCCCGTATGGAGCATATATCCGAATAAGACCCCCCCCCCCC Found at i:2942189 original size:18 final size:17 Alignment explanation
Indices: 2942155--2942203 Score: 54 Period size: 18 Copynumber: 2.8 Consensus size: 17 2942145 TTTTTAAGCT * 2942155 TGTACCTTTTCTACCTA 1 TGTACCTTGTCTACCTA * 2942172 TGTACCTATGTGTACCTA 1 TGTACCT-TGTCTACCTA * * * 2942190 TGTGCCCTTTCTAC 1 TGTACCTTGTCTAC 2942204 TTTGTCGTAC Statistics Matches: 25, Mismatches: 6, Indels: 2 0.76 0.18 0.06 Matches are distributed among these distances: 17 12 0.48 18 13 0.52 ACGTcount: A:0.16, C:0.29, G:0.12, T:0.43 Consensus pattern (17 bp): TGTACCTTGTCTACCTA Left flanking sequence: Indices 2941655 -- 2942154 TTGCTCCAGGCTTCCACTTAGGCGATGCATGCCTAGAAGCCTAGAGGTCCTCCTACAACAAATTC CGACCTCTGGCTTCTCATTAAATTGTTAATGGTGTTGTCAAAATGTGTTTCAGATTGGCGACAGT TGGTTTTTACTATCAATTGCGTAATTGTTCTGTGTAAAAATCTATGTAGTTGTTGATTTTCCCTC TGGACTTTAAACTTTTTATTGGGGTGGCTCATCCCTCTCATTTCTCGAGTTACAAGCTCATTTCA ACAAAGCTTTTCTTAATTTTTTAATTTTTTAAAAAAGCTCACTGAAATGTGTATAGTCCGCTACT GATTTCTGTGCATTGCACAAATCAATGAACAATCATGAGTGCAAGTACATTCCAAAGTGACAAAA ACTATTATTTGCTGTAAGGTAGGTGTTTAATACAAGCGTGAGAGATATGAGAAGCTTGAAAGCTT CAGGCATTTCCAAAGGTCAAGATGCCTGCCTGCTATTTTTAAGCT Right flanking sequence: Indices 2942204 -- 2942703 TTTGTCGTACGTCGGATGATAATAGGTATGAGATGGGTGCATGCAGGCGTGTAGGCAAATGATAG GCGCTGCACATTTTGTCGGTAGGAAAATAGGTAGGTTTTGGTTTTGTCTGGTTTAGCCACATAAA ATTTTAAATTGGAAAAAAGTTCATTAACTTAAAATTTCATTTTTTTTTGAAAATTTAATTTTTTT TGAATTTAAGCGCTAATCAAATAACTTAAATTGAACAAAAAAATCAAAGGTAAATTGAAATTAAT TTTTGGCTCAAAATTGAAATTCTATTTTGTAAAAATGCACTAAAGTCCAATTTTTATTTCTCTAA TTTTTAGAATTTTAGCGCTTTTTTTAAAATAACCTTGACAATTTTTGGCACAAAAATATTATTTT GGCTCGAAATTTGAAATTTTCAAACTTTTTAAAGCAAATTCAACAGTTTAATTTATTTGAATTAA AATCGACGCAAAGTTCAAATTAAAAGAATTGTGTGAGAGTTCAAA Found at i:2942397 original size:18 final size:19 Alignment explanation
Indices: 2942364--2942402 Score: 64 Period size: 18 Copynumber: 2.1 Consensus size: 19 2942354 TCATTAACTT * 2942364 AAAATTTCATTTTTTTTTG 1 AAAATTTCAATTTTTTTTG 2942383 AAAATTT-AATTTTTTTTG 1 AAAATTTCAATTTTTTTTG 2942401 AA 1 AA 2942403 TTTAAGCGCT Statistics Matches: 19, Mismatches: 1, Indels: 1 0.90 0.05 0.05 Matches are distributed among these distances: 18 12 0.63 19 7 0.37 ACGTcount: A:0.33, C:0.03, G:0.05, T:0.59 Consensus pattern (19 bp): AAAATTTCAATTTTTTTTG Left flanking sequence: Indices 2941864 -- 2942363 TTTATTGGGGTGGCTCATCCCTCTCATTTCTCGAGTTACAAGCTCATTTCAACAAAGCTTTTCTT AATTTTTTAATTTTTTAAAAAAGCTCACTGAAATGTGTATAGTCCGCTACTGATTTCTGTGCATT GCACAAATCAATGAACAATCATGAGTGCAAGTACATTCCAAAGTGACAAAAACTATTATTTGCTG TAAGGTAGGTGTTTAATACAAGCGTGAGAGATATGAGAAGCTTGAAAGCTTCAGGCATTTCCAAA GGTCAAGATGCCTGCCTGCTATTTTTAAGCTTGTACCTTTTCTACCTATGTACCTATGTGTACCT ATGTGCCCTTTCTACTTTGTCGTACGTCGGATGATAATAGGTATGAGATGGGTGCATGCAGGCGT GTAGGCAAATGATAGGCGCTGCACATTTTGTCGGTAGGAAAATAGGTAGGTTTTGGTTTTGTCTG GTTTAGCCACATAAAATTTTAAATTGGAAAAAAGTTCATTAACTT Right flanking sequence: Indices 2942403 -- 2942902 TTTAAGCGCTAATCAAATAACTTAAATTGAACAAAAAAATCAAAGGTAAATTGAAATTAATTTTT GGCTCAAAATTGAAATTCTATTTTGTAAAAATGCACTAAAGTCCAATTTTTATTTCTCTAATTTT TAGAATTTTAGCGCTTTTTTTAAAATAACCTTGACAATTTTTGGCACAAAAATATTATTTTGGCT CGAAATTTGAAATTTTCAAACTTTTTAAAGCAAATTCAACAGTTTAATTTATTTGAATTAAAATC GACGCAAAGTTCAAATTAAAAGAATTGTGTGAGAGTTCAAAACTTTTCAGAAAATTTGAAAAATA TTTTCCGAAATGTTTTAATTTTAATTTCGAATTTCTCAACTATTATTACCTGAAATTCGCATCGA AAATTAAAATTTTTGTTTTACAAAATTCCGCATTACGAATTTTAAACCGAAATTTCAGCCCCAAA TAAATTTTAAAATTAAACAATTAATTTTTAGTAAAAAATTTCAAG Found at i:2942404 original size:16 final size:17 Alignment explanation
Indices: 2942365--2942407 Score: 54 Period size: 18 Copynumber: 2.5 Consensus size: 17 2942355 CATTAACTTA * 2942365 AAATTTCATTTTTTTTTG 1 AAATTT-AATTTTTTTTG 2942383 AAAATTTAATTTTTTTTG 1 -AAATTTAATTTTTTTTG 2942401 -AATTTAA 1 AAATTTAA 2942408 GCGCTAATCA Statistics Matches: 23, Mismatches: 1, Indels: 3 0.85 0.04 0.11 Matches are distributed among these distances: 16 7 0.30 18 10 0.43 19 6 0.26 ACGTcount: A:0.33, C:0.02, G:0.05, T:0.60 Consensus pattern (17 bp): AAATTTAATTTTTTTTG Left flanking sequence: Indices 2941865 -- 2942364 TTATTGGGGTGGCTCATCCCTCTCATTTCTCGAGTTACAAGCTCATTTCAACAAAGCTTTTCTTA ATTTTTTAATTTTTTAAAAAAGCTCACTGAAATGTGTATAGTCCGCTACTGATTTCTGTGCATTG CACAAATCAATGAACAATCATGAGTGCAAGTACATTCCAAAGTGACAAAAACTATTATTTGCTGT AAGGTAGGTGTTTAATACAAGCGTGAGAGATATGAGAAGCTTGAAAGCTTCAGGCATTTCCAAAG GTCAAGATGCCTGCCTGCTATTTTTAAGCTTGTACCTTTTCTACCTATGTACCTATGTGTACCTA TGTGCCCTTTCTACTTTGTCGTACGTCGGATGATAATAGGTATGAGATGGGTGCATGCAGGCGTG TAGGCAAATGATAGGCGCTGCACATTTTGTCGGTAGGAAAATAGGTAGGTTTTGGTTTTGTCTGG TTTAGCCACATAAAATTTTAAATTGGAAAAAAGTTCATTAACTTA Right flanking sequence: Indices 2942408 -- 2942907 GCGCTAATCAAATAACTTAAATTGAACAAAAAAATCAAAGGTAAATTGAAATTAATTTTTGGCTC AAAATTGAAATTCTATTTTGTAAAAATGCACTAAAGTCCAATTTTTATTTCTCTAATTTTTAGAA TTTTAGCGCTTTTTTTAAAATAACCTTGACAATTTTTGGCACAAAAATATTATTTTGGCTCGAAA TTTGAAATTTTCAAACTTTTTAAAGCAAATTCAACAGTTTAATTTATTTGAATTAAAATCGACGC AAAGTTCAAATTAAAAGAATTGTGTGAGAGTTCAAAACTTTTCAGAAAATTTGAAAAATATTTTC CGAAATGTTTTAATTTTAATTTCGAATTTCTCAACTATTATTACCTGAAATTCGCATCGAAAATT AAAATTTTTGTTTTACAAAATTCCGCATTACGAATTTTAAACCGAAATTTCAGCCCCAAATAAAT TTTAAAATTAAACAATTAATTTTTAGTAAAAAATTTCAAGCCAAA Found at i:2944038 original size:13 final size:12 Alignment explanation
Indices: 2944011--2944038 Score: 33 Period size: 11 Copynumber: 2.3 Consensus size: 12 2944001 AATTTTGCGT * 2944011 AAAATTTTTT-G 1 AAATTTTTTTCG 2944022 AAATTTTTTTCG 1 AAATTTTTTTCG 2944034 CAAAT 1 -AAAT 2944039 GTAGGAGCTG Statistics Matches: 14, Mismatches: 1, Indels: 2 0.82 0.06 0.12 Matches are distributed among these distances: 11 9 0.64 12 1 0.07 13 4 0.29 ACGTcount: A:0.36, C:0.07, G:0.07, T:0.50 Consensus pattern (12 bp): AAATTTTTTTCG Left flanking sequence: Indices 2943511 -- 2944010 TCTGTAGAATATCCAATGAACCCCCCCCCGTTTTTTTTTTGCTGAATGACCCATTTTTTATCAAA TTTTCTCCTCAAGCATTCAGAGATCTTCACGTCGAAAAAAAAAAAAAAAAGATTCTGAGTCAATT TTCAAGATGAAAAGAGGCGCCCAAAGTGGCGATAACGAGATTTTGTGCTTCTTGAAGTGAGAAAT GAGAACGTTTTTTCGTTCGTTTCAGCCAAAGATTTCCCGTTTTTCAGAACTCTTGTTCGGCGGCG GTAAATATTTTTTTTCGTGTTTTTCATATTTGGGAGTCCCAGAGGGTTTCGGATTTTTCTTCCTT CAAGTAATTTCTGATCTCTTCTGTATTCAACTTTTTTGATTTTTAGGGGTTCCTGGTAGAAGTTG CCGCGAAATTTGAATTTTAAAATTTTTAAAATTTCACTAAATTCAACATTTTCGGAAAAAAGAGT TGCAGAAGCTTTTAAAAACTATTTGAAAATTCAAGAATTTTGCGT Right flanking sequence: Indices 2944039 -- 2944538 GTAGGAGCTGTAGAAAAATTGGGCAAACACTAAAATATTTAAATCTTTCAGAAAAATATTTTGTG CAAATTTTAAATTTTGGATTTTTTAATAAATAAATTGGAAAATTATACAAAAATTTCAAAAAATA AAAACTTGTTCAATTTTGGGATTTGTAGGAAAATCGTACTAAAAGATGTAAAAATCAAACGAATT TTTCCGGCAAATCGTCAAAGTGGCAAATTTTCGGAATTGTAAACTTCCGGCCTACCGACAAACCA GCAAATTGCCGATTTGCCGAATTTGCCGGAATTTTTGGCAAATTGTGGGTTTGCACTTATTTTTT GGAAATTTCAGAATTTTAAATTTCAATTGGCAAAATTGTACGCATCTTATGACTGTTCCTACATC TAACTTAATAAGTAAGCAAATTCTATGCAAATATCTGAAGAAAAAGAAAAAAAAAAGAAATTTTT AAAAACGTTTTGAAAATTCGTGAATTTTTAAAAAAATTTTAGGAG Found at i:2944657 original size:11 final size:11 Alignment explanation
Indices: 2944641--2944673 Score: 45 Period size: 11 Copynumber: 3.2 Consensus size: 11 2944631 AATAAATTGG 2944641 AAAATTATACA 1 AAAATTATACA 2944652 AAAATT-T-CA 1 AAAATTATACA * 2944661 AAAATTAAACA 1 AAAATTATACA 2944672 AA 1 AA 2944674 TCGTTAGAAA Statistics Matches: 19, Mismatches: 1, Indels: 4 0.79 0.04 0.17 Matches are distributed among these distances: 9 8 0.42 10 1 0.05 11 10 0.53 ACGTcount: A:0.67, C:0.09, G:0.00, T:0.24 Consensus pattern (11 bp): AAAATTATACA Left flanking sequence: Indices 2944141 -- 2944640 GAAAATTATACAAAAATTTCAAAAAATAAAAACTTGTTCAATTTTGGGATTTGTAGGAAAATCGT ACTAAAAGATGTAAAAATCAAACGAATTTTTCCGGCAAATCGTCAAAGTGGCAAATTTTCGGAAT TGTAAACTTCCGGCCTACCGACAAACCAGCAAATTGCCGATTTGCCGAATTTGCCGGAATTTTTG GCAAATTGTGGGTTTGCACTTATTTTTTGGAAATTTCAGAATTTTAAATTTCAATTGGCAAAATT GTACGCATCTTATGACTGTTCCTACATCTAACTTAATAAGTAAGCAAATTCTATGCAAATATCTG AAGAAAAAGAAAAAAAAAAGAAATTTTTAAAAACGTTTTGAAAATTCGTGAATTTTTAAAAAAAT TTTAGGAGCTGTAGAAAATTTGGGCAAACACTAAAATTTTCAAATCTCTCAAAAAAAATGTTTTT TTTTTAATTTTAAGTTTTGGATTTTTTTTTAAATAAATAAATTGG Right flanking sequence: Indices 2944674 -- 2945173 TCGTTAGAAAATCTCAAGAAGATGTACATATAAATTATTTTTATAGCTTCTAATCGAATTTTAGC CAAAAATTTTCACTTTTCATAACCAAATTATTGATGTTTCAACAATTATAAACCTATTGCTAGAG GAAAGTTAAAGCGGCCGACATCTCGCGGTTCTGGTTTTGCTAGTTAACCGTTTTTATTCACTGTT AAGTTCAGACCCACAAAATGTCGGCCGCTGTAACTATGTTCAAAGTAGAGTTGATAAAATTTTGT AAACTAAAAAAATGTAGAAAAAAAGCTGGGCAATATTTTGTTAGTTGAAATATTTTCTCTAACTG TTTTAGTTTTTGAGTTATAAATTCCAAAATTCCAATATACCCATTGGAATTGGAACAACAAAAAA CCCAGAGGCAAATAAAATTTAGTTGAACCTGTAATTTAATTTTTTCAGCCAGTTTCAAATTATTT TAAGAATAAATCATGGCCAACGGAACGTGCTTGAAATTTATGACG Found at i:2947126 original size:20 final size:21 Alignment explanation
Indices: 2947087--2947128 Score: 63 Period size: 20 Copynumber: 2.0 Consensus size: 21 2947077 GTTCTACATC 2947087 TTTTTGGAAAGGTTTAGAAAT 1 TTTTTGGAAAGGTTTAGAAAT * * 2947108 TTTTTGG-AAGTTTTGGAAAT 1 TTTTTGGAAAGGTTTAGAAAT 2947128 T 1 T 2947129 CCTAGATTGC Statistics Matches: 19, Mismatches: 2, Indels: 1 0.86 0.09 0.05 Matches are distributed among these distances: 20 12 0.63 21 7 0.37 ACGTcount: A:0.29, C:0.00, G:0.24, T:0.48 Consensus pattern (21 bp): TTTTTGGAAAGGTTTAGAAAT Left flanking sequence: Indices 2946587 -- 2947086 CGGAAAATCTGGTCCCTTGGAGAGAAAAATGGTTGGAATACGCTCATACACCTCCGGAGTTTATG ACACCTTGAGTTTTGAGTAGAAGGTTTTTCGGTAATACGATGCCTCCTGAATTTTTGTTTTTGCT TGAAATTTTTTGGCAAAAGTTGATAGTTTTGTTTATGATACGCCAAGTTGTACCAATAATTTTAT CTAAACATTTCCGAGTGGGTGCCTGCCTCGTGCCTACATAGGCAGGTCCGTAGGCACGCAGACCT TTTTCCCGCCACTGTTTTTTTTGTTAAATTGTTTGGAAATTTAAAATTAATTTTTTTTGCAAATT ACGCACCATAGAAAATATTTGAATATTTTAAGGGCATTAATTTTTTTTTAAGCTTCTGAAAACAT TTTCAGAAGCTTAAAAGGTTTGGAAATTTTGTGGGCATTTCTAAAAATTTCGGAAAATTTTTAAA AGAAATTTTCTAAGAGATCTAAAATTCTCTAAAATGTTCTACATC Right flanking sequence: Indices 2947129 -- 2947628 CCTAGATTGCTCTGAGTATTCCTGGCAAGTTTAGAACATTTTTTAAATAATATTCTGAAATGTTG TGGTAATTTTTTGGCAATTTAAAAAAGTTCTGGAATGCTCTGAAATCTTTTTTTTTTTGAAATAT TAGAAATTTCTCGAATTTTCTGGAAAACTCTGGAGATTCCTGAAAAAATCGGATTTTTTCTGAAA TTTTTTAAATGTTCAGAGTTGTTTTGGAAAGTTTTGGAAAGTCCTAGAAATGTTTGGATAGTTCT AGAATTTTTCTGTAAGTTCTAAAATTCCTTAATTAATCTTAAGATGTACTGAATATTTTTGGAAT CTTCTGGAAAGTTATGAAAAATTCTAGAAAAGTTTTTGAAAGTTTTGGAAATTTCTAGAATGCTC TGGACTTTTCTGGCAAGTTCAAGAATTATTTCGGAATATTCTGAAATGTTCTGGAAAATTTTGAA AATGTTTGAAAGTTTCTGGAAAGCTCTGGACATTTCTGAAATTTT Found at i:2947494 original size:11 final size:11 Alignment explanation
Indices: 2947468--2947504 Score: 39 Period size: 11 Copynumber: 3.5 Consensus size: 11 2947458 TGGAAAGTTA * * 2947468 TGAAAAATTCT 1 TGAAAAGTTTT * 2947479 AGAAAAGTTTT 1 TGAAAAGTTTT 2947490 TG-AAAGTTTT 1 TGAAAAGTTTT * 2947500 GGAAA 1 TGAAA 2947505 TTTCTAGAAT Statistics Matches: 20, Mismatches: 5, Indels: 2 0.74 0.19 0.07 Matches are distributed among these distances: 10 9 0.45 11 11 0.55 ACGTcount: A:0.43, C:0.03, G:0.19, T:0.35 Consensus pattern (11 bp): TGAAAAGTTTT Left flanking sequence: Indices 2946968 -- 2947467 TGAAAACATTTTCAGAAGCTTAAAAGGTTTGGAAATTTTGTGGGCATTTCTAAAAATTTCGGAAA ATTTTTAAAAGAAATTTTCTAAGAGATCTAAAATTCTCTAAAATGTTCTACATCTTTTTGGAAAG GTTTAGAAATTTTTTGGAAGTTTTGGAAATTCCTAGATTGCTCTGAGTATTCCTGGCAAGTTTAG AACATTTTTTAAATAATATTCTGAAATGTTGTGGTAATTTTTTGGCAATTTAAAAAAGTTCTGGA ATGCTCTGAAATCTTTTTTTTTTTGAAATATTAGAAATTTCTCGAATTTTCTGGAAAACTCTGGA GATTCCTGAAAAAATCGGATTTTTTCTGAAATTTTTTAAATGTTCAGAGTTGTTTTGGAAAGTTT TGGAAAGTCCTAGAAATGTTTGGATAGTTCTAGAATTTTTCTGTAAGTTCTAAAATTCCTTAATT AATCTTAAGATGTACTGAATATTTTTGGAATCTTCTGGAAAGTTA Right flanking sequence: Indices 2947505 -- 2948004 TTTCTAGAATGCTCTGGACTTTTCTGGCAAGTTCAAGAATTATTTCGGAATATTCTGAAATGTTC TGGAAAATTTTGAAAATGTTTGAAAGTTTCTGGAAAGCTCTGGACATTTCTGAAATTTTCTTAAT GCTCGGAACTTTTTTGGAAAGTTTTGGAAAGCTCTGGAAATGTTTGGACAGTTGTAGAAATTTTC TGAAAGTTCTATAATTCTCAAAGATGTACTGGATGCTTTTGGAATCTTCTGGAAAGTTATGAAAA ATTCTAGAAACGTTTTTGGAAGTTTTGGAAATTTCTAGAATGCTCTGGACTTTTCTGGCAAGTTC AAGAATTATTTTGGAATATGCTGAAATGTTCTGGAAACTTTAAAAAATGTTTGAGAGTTTCTGGA AAGCTCTGGACATTTCTGAAATTTTTTTAATGCTCGGAACTTTTTTGAAAAGTTTTGGAAAGCTC TGGAAATGTTTGGACAGTTGTAGAAATTTTCTGAAAGTTCTATAA Found at i:2947624 original size:30 final size:30 Alignment explanation
Indices: 2947557--2947670 Score: 100 Period size: 30 Copynumber: 3.8 Consensus size: 30 2947547 TTTCGGAATA ** ** * * 2947557 TTCTGAAATGTTCTGGAAAATTTTGAAAAT 1 TTCTGAAAGTTTCTGGAAAGCTCTGAACAT * * * 2947587 GTTTGAAAGTTTCTGGAAAGCTCTGGACAT 1 TTCTGAAAGTTTCTGGAAAGCTCTGAACAT * * * * * 2947617 TTCTGAAATTTTCT-TAATGCTCGGAACTT 1 TTCTGAAAGTTTCTGGAAAGCTCTGAACAT * 2947646 TTTTGGAAAGTTT-TGGAAAGCTCTG 1 TTCT-GAAAGTTTCTGGAAAGCTCTG 2947671 GAAATGTTTG Statistics Matches: 60, Mismatches: 22, Indels: 4 0.70 0.26 0.05 Matches are distributed among these distances: 29 14 0.23 30 46 0.77 ACGTcount: A:0.28, C:0.11, G:0.21, T:0.39 Consensus pattern (30 bp): TTCTGAAAGTTTCTGGAAAGCTCTGAACAT Left flanking sequence: Indices 2947057 -- 2947556 GATCTAAAATTCTCTAAAATGTTCTACATCTTTTTGGAAAGGTTTAGAAATTTTTTGGAAGTTTT GGAAATTCCTAGATTGCTCTGAGTATTCCTGGCAAGTTTAGAACATTTTTTAAATAATATTCTGA AATGTTGTGGTAATTTTTTGGCAATTTAAAAAAGTTCTGGAATGCTCTGAAATCTTTTTTTTTTT GAAATATTAGAAATTTCTCGAATTTTCTGGAAAACTCTGGAGATTCCTGAAAAAATCGGATTTTT TCTGAAATTTTTTAAATGTTCAGAGTTGTTTTGGAAAGTTTTGGAAAGTCCTAGAAATGTTTGGA TAGTTCTAGAATTTTTCTGTAAGTTCTAAAATTCCTTAATTAATCTTAAGATGTACTGAATATTT TTGGAATCTTCTGGAAAGTTATGAAAAATTCTAGAAAAGTTTTTGAAAGTTTTGGAAATTTCTAG AATGCTCTGGACTTTTCTGGCAAGTTCAAGAATTATTTCGGAATA Right flanking sequence: Indices 2947671 -- 2948170 GAAATGTTTGGACAGTTGTAGAAATTTTCTGAAAGTTCTATAATTCTCAAAGATGTACTGGATGC TTTTGGAATCTTCTGGAAAGTTATGAAAAATTCTAGAAACGTTTTTGGAAGTTTTGGAAATTTCT AGAATGCTCTGGACTTTTCTGGCAAGTTCAAGAATTATTTTGGAATATGCTGAAATGTTCTGGAA ACTTTAAAAAATGTTTGAGAGTTTCTGGAAAGCTCTGGACATTTCTGAAATTTTTTTAATGCTCG GAACTTTTTTGAAAAGTTTTGGAAAGCTCTGGAAATGTTTGGACAGTTGTAGAAATTTTCTGAAA GTTCTATAATTCTCAAAGATGTACTGGATGCTTTTGGAATCTTCTGGAAATTTATTAAAAATTTT CGAAAGTTTTGGAAATTCCTGGAATGCTCTGGAGTTTTCTGAAAACTATTTTCTGAAAAAATCGA AATTTTCTGAATTTTTTTTTGGAGTGTTTTAAAAGTCCTAGAAAT Found at i:2948205 original size:11 final size:11 Alignment explanation
Indices: 2948189--2948217 Score: 37 Period size: 10 Copynumber: 2.7 Consensus size: 11 2948179 AGCTCTAGAG 2948189 TTTTTGAAAAA 1 TTTTTGAAAAA * 2948200 TTTTTG-GAAA 1 TTTTTGAAAAA * 2948210 TTTTAGAA 1 TTTTTGAA 2948218 GTTTTCCAGA Statistics Matches: 14, Mismatches: 3, Indels: 2 0.74 0.16 0.11 Matches are distributed among these distances: 10 8 0.57 11 6 0.43 ACGTcount: A:0.38, C:0.00, G:0.14, T:0.48 Consensus pattern (11 bp): TTTTTGAAAAA Left flanking sequence: Indices 2947689 -- 2948188 TAGAAATTTTCTGAAAGTTCTATAATTCTCAAAGATGTACTGGATGCTTTTGGAATCTTCTGGAA AGTTATGAAAAATTCTAGAAACGTTTTTGGAAGTTTTGGAAATTTCTAGAATGCTCTGGACTTTT CTGGCAAGTTCAAGAATTATTTTGGAATATGCTGAAATGTTCTGGAAACTTTAAAAAATGTTTGA GAGTTTCTGGAAAGCTCTGGACATTTCTGAAATTTTTTTAATGCTCGGAACTTTTTTGAAAAGTT TTGGAAAGCTCTGGAAATGTTTGGACAGTTGTAGAAATTTTCTGAAAGTTCTATAATTCTCAAAG ATGTACTGGATGCTTTTGGAATCTTCTGGAAATTTATTAAAAATTTTCGAAAGTTTTGGAAATTC CTGGAATGCTCTGGAGTTTTCTGAAAACTATTTTCTGAAAAAATCGAAATTTTCTGAATTTTTTT TTGGAGTGTTTTAAAAGTCCTAGAAATTTTTGGCCAGCTCTAGAG Right flanking sequence: Indices 2948218 -- 2948717 GTTTTCCAGACCTTCCACCTTCCTTTTTTTCTGGAGCAATTCCAACTTTAAAAATCAAACTTCAC AAGAGACTTGCACAATTTATTTAGCTTTTTCATTTTTCTCACGCTGCACAGTAATTCCCCTAATG TTGTTCCATTCATTTGGTTCCTCATCTTTCTCCCTCTCCCAAAAATAATCTTCTTTTTCCAACAA ACACCCATCCTTTTTCCGCCTTATTCCCTCCCTGTCCCTCTCATCATTTTTGTTCCAGTTCTTCT CATTTTCCCGATCCCAAGAGTCTTTCTCCCAATTGTTTATTGTTCTTCAATGCTGAAAGTCACAA TTGATGAGAAAAAAAGGAGAAGAAGAAGAATGTCTGGAACACGCCTTAAAATTAATTTCCACCCC AATTTCCATTCATGTAAATTTTTTGGCCGCCTTTTTCGGGGCTCTAACAAATTGGTTACACAACT TTTTGTGCATATTTTGTCTCAAAAAGTGGACATTTGAGTTTTTTC Found at i:2949273 original size:42 final size:42 Alignment explanation
Indices: 2949185--2949273 Score: 101 Period size: 42 Copynumber: 2.1 Consensus size: 42 2949175 GCAAATTGAC ** ******* 2949185 AATTTGCCGGTTTGCCGACTTGCCGCAAATTTCAATTCCGGC 1 AATTTGCCGGTTTGCCGACTTGCCGCAAATTAAAAAAAAACA * * 2949227 AATTTGCCGGTTTGCCGATTTGCCGGAAATTAAAAAAAAACA 1 AATTTGCCGGTTTGCCGACTTGCCGCAAATTAAAAAAAAACA 2949269 AATTT 1 AATTT 2949274 AAAACTGCAT Statistics Matches: 36, Mismatches: 11, Indels: 0 0.77 0.23 0.00 Matches are distributed among these distances: 42 36 1.00 ACGTcount: A:0.29, C:0.21, G:0.19, T:0.30 Consensus pattern (42 bp): AATTTGCCGGTTTGCCGACTTGCCGCAAATTAAAAAAAAACA Left flanking sequence: Indices 2948685 -- 2949184 TTTGTCTCAAAAAGTGGACATTTGAGTTTTTTCGAAATAGTTGTAGTGCTTTTCTAGCTGAGAAT TTTCAAAATTTTTTTGAAAATTCGGAAAAATTGGAGCCTAACCTCATGAATCCTATACCATTCAG AAAAAATTATCTGAAGTGTTTAAATTTTTTTCAATTTTGCAAAAATGTCAAATGACTATGCAAAA TTTTTTGCAAAATGGAAAACAAAATTATTAAAAAATTGAAGGGGTGGGCGGGGTAATTGCCGTTC GGCAATTTGCCGGTTTGCCGGCTTGCCGGAAATTTTCAATTCCGGCAATTTGTCGGTTTGCCGTT TGTCTTTAGATATTTTCATAAAATTTGCTAACTTTTAAAAATAGATGTACGAACATTCATAGGAT GCGTACAATTTTGCCGATGAAATTGAAATTCTGAAACTTCCAACAAAAAAAGTTCAAAACTACAA AATTTTCGACAATTGCCGGTTTTCAGGCAAATTCGGCAAATTGAC Right flanking sequence: Indices 2949274 -- 2949773 AAAACTGCATTTTTCCAATTTTGTGTCAGTGGTAGATCTTGAGAATTTTTGGGAAAAATCAAAAA AATGGGTCGCTTTTGTGTATTTAACAAAATTTAAAAATAAAAATTAATTTTTCCAAAAGAAAAAA TTTATAAAATTTTATGAAAACCAAAGAATTTGGGGGGGACTCTTTGAAAAAAGAGTTCAATTCTT CCAAAAATTCCAAATTTTTATTTTTGTTTGTTTGCCAAGACTAGTATCTGTAGAACAGGGGTGTG CGGCAAATCTCAAAATTTGCCGAGCTCGGCAAATTCGGCAAATCTCTTTGTTCAATATTTGCCGA GCACGGCAAATTCGGCACATTTGCCGAGCTCGGCATAATCCGGCAAATTCGGCAAATGTGCCGTT CTTAACAAACTCGGAAAATTTTGATATTTTTTTATGTTTTTTGGAGCACCAAAACTACTGAATTC TTAACACACCTCTGACTTCGGAATAAGTTCCGTGTAGTATGTCTG Found at i:2949632 original size:27 final size:28 Alignment explanation
Indices: 2949590--2949647 Score: 88 Period size: 27 Copynumber: 2.1 Consensus size: 28 2949580 TTTGTTCAAT * * 2949590 ATTTGCCGAGCACGGCA-AATTCGGCAC 1 ATTTGCCGAGCACGGCATAATCCGGCAA * 2949617 ATTTGCCGAGCTCGGCATAATCCGGCAA 1 ATTTGCCGAGCACGGCATAATCCGGCAA 2949645 ATT 1 ATT 2949648 CGGCAAATGT Statistics Matches: 27, Mismatches: 3, Indels: 1 0.87 0.10 0.03 Matches are distributed among these distances: 27 16 0.59 28 11 0.41 ACGTcount: A:0.26, C:0.28, G:0.24, T:0.22 Consensus pattern (28 bp): ATTTGCCGAGCACGGCATAATCCGGCAA Left flanking sequence: Indices 2949090 -- 2949589 GATGAAATTGAAATTCTGAAACTTCCAACAAAAAAAGTTCAAAACTACAAAATTTTCGACAATTG CCGGTTTTCAGGCAAATTCGGCAAATTGACAATTTGCCGGTTTGCCGACTTGCCGCAAATTTCAA TTCCGGCAATTTGCCGGTTTGCCGATTTGCCGGAAATTAAAAAAAAACAAATTTAAAACTGCATT TTTCCAATTTTGTGTCAGTGGTAGATCTTGAGAATTTTTGGGAAAAATCAAAAAAATGGGTCGCT TTTGTGTATTTAACAAAATTTAAAAATAAAAATTAATTTTTCCAAAAGAAAAAATTTATAAAATT TTATGAAAACCAAAGAATTTGGGGGGGACTCTTTGAAAAAAGAGTTCAATTCTTCCAAAAATTCC AAATTTTTATTTTTGTTTGTTTGCCAAGACTAGTATCTGTAGAACAGGGGTGTGCGGCAAATCTC AAAATTTGCCGAGCTCGGCAAATTCGGCAAATCTCTTTGTTCAAT Right flanking sequence: Indices 2949648 -- 2950147 CGGCAAATGTGCCGTTCTTAACAAACTCGGAAAATTTTGATATTTTTTTATGTTTTTTGGAGCAC CAAAACTACTGAATTCTTAACACACCTCTGACTTCGGAATAAGTTCCGTGTAGTATGTCTGCTTA AGCATCAAAATAACTCAATTTTGTGTCATTTTACTGAATTTTTGGCGAAAAAATCAGTAGTTTTA GTCGAAATTGTACTGTCAAATTTTTGACGTGTGCGGCAAATTTCGAAATTTGCCGAGCTCGGCAA ATTCGGCAAATTCGGAAAATTTGCCGCACACCCCTGCTGTAGAAGTTGAATTCGTCACAAAAGCC CCTCTAGAGCGGTCTAAATTGAATTTCTACGTTCAAAAATTTTTGAAAAAAACTTTAAAAAAAAT TAAAAACATTTAAAAACATTGAAAAAATCCAGTACCTGTGTCGATTGACGCTGCAGAAAAATTCG AAATAAATAAACAGAAAAAACTGATTTTTTTTCCGAAAACCCAAT Found at i:2950034 original size:13 final size:13 Alignment explanation
Indices: 2950007--2950036 Score: 39 Period size: 13 Copynumber: 2.3 Consensus size: 13 2949997 TTCTACGTTC * ** 2950007 AAAAATTTTTGAA 1 AAAAACTTTAAAA 2950020 AAAAACTTTAAAA 1 AAAAACTTTAAAA 2950033 AAAA 1 AAAA 2950037 TTAAAAACAT Statistics Matches: 14, Mismatches: 3, Indels: 0 0.82 0.18 0.00 Matches are distributed among these distances: 13 14 1.00 ACGTcount: A:0.67, C:0.03, G:0.03, T:0.27 Consensus pattern (13 bp): AAAAACTTTAAAA Left flanking sequence: Indices 2949507 -- 2950006 GACTAGTATCTGTAGAACAGGGGTGTGCGGCAAATCTCAAAATTTGCCGAGCTCGGCAAATTCGG CAAATCTCTTTGTTCAATATTTGCCGAGCACGGCAAATTCGGCACATTTGCCGAGCTCGGCATAA TCCGGCAAATTCGGCAAATGTGCCGTTCTTAACAAACTCGGAAAATTTTGATATTTTTTTATGTT TTTTGGAGCACCAAAACTACTGAATTCTTAACACACCTCTGACTTCGGAATAAGTTCCGTGTAGT ATGTCTGCTTAAGCATCAAAATAACTCAATTTTGTGTCATTTTACTGAATTTTTGGCGAAAAAAT CAGTAGTTTTAGTCGAAATTGTACTGTCAAATTTTTGACGTGTGCGGCAAATTTCGAAATTTGCC GAGCTCGGCAAATTCGGCAAATTCGGAAAATTTGCCGCACACCCCTGCTGTAGAAGTTGAATTCG TCACAAAAGCCCCTCTAGAGCGGTCTAAATTGAATTTCTACGTTC Right flanking sequence: Indices 2950037 -- 2950536 TTAAAAACATTTAAAAACATTGAAAAAATCCAGTACCTGTGTCGATTGACGCTGCAGAAAAATTC GAAATAAATAAACAGAAAAAACTGATTTTTTTTCCGAAAACCCAATTTAAGACAGTTATAGAGTA CGATTTTTGGCAAATTTAAAACGTTTCAGAAATTATCAAAAAATCAAAAGCCCTTTGAAATTGTT ACTTTCAAAGATTCCAAAACACAAAACTCTTTGCAATCACTCTTACGTCATAAAAGTTGACAAGA ATCTTCAAACTTTAGACTTTCGGATCAACTTTTTTCTTCTTTTTTCTTTTTTTCTAAACTTTTCC CAGTTGGTTCGTCTCAATCATAATGTCACTCTCATTGGACTTACCAATCATTCATACAACTCTGC AACGTTCTGACAAGAGATATGCGTGTGTGTGTGTGTGTGTGTGTGTGTAACACTTTTCTTCTCAA AACTTTTTTTGACACATTTTGACACCCCACGAGTTTCGACGAATG Found at