TRAP (Tandem Repeats Analysis Program) TRF Version 4.00 Sequence: CHROMOSOME_V Parameters: 2 5 7 80 10 25 1000 Pmatch=0.80,Pindel=0.10 tuple sizes 0,4,5,7 tuple distances 0, 29, 159, 1000 Length: 20922231 ACGTcount: A:0.32, C:0.18, G:0.18, T:0.32 Found at i: i:4806080 original size:15 final size:15 Alignment explanation
Indices: 4806048--4806080 Score: 45 Period size: 15 Copynumber: 2.2 Consensus size: 15 4806038 ACATCCTAGC * * * 4806048 ATTTTTTTTTTTTTA 1 ATTGTTTTTTTGTAA 4806063 ATTGTTTTTTTGTAA 1 ATTGTTTTTTTGTAA 4806078 ATT 1 ATT 4806081 TCAATTTTTT Statistics Matches: 15, Mismatches: 3, Indels: 0 0.83 0.17 0.00 Matches are distributed among these distances: 15 15 1.00 ACGTcount: A:0.18, C:0.00, G:0.06, T:0.76 Consensus pattern (15 bp): ATTGTTTTTTTGTAA Left flanking sequence: Indices 4805548 -- 4806047 GTCGTGGAGCCAGCAGTCAACTTGTGGAGCTCTGCACAACTCGTCTGACCATTTCCATTTTCTAA GTCTCGTGGAGCACTTGGAGCTTGTGATAGGGAGATTGATCGAAGAGATGGACGGCCTGGAACCA GTACGGTAGAGGGCCCAACCTCATCTCGTTCTTCTTCCTCATCTAGTAAACTGAATGTGGCTTCT GTTTTCGTCATGGAATTGTCTGGAATTAGAGGGATTTAGAATTTGAGAATAGTATTCGGCTGTGG AAAAAAAGTTGCAGAAAAAACGAAAAATTCAAGTTTCAAGATGGAAAATTGAATATTAAAAATTA AAAATTGAAATGGGTCGTTGTCCCAAGAGCTGGAATTTTTGGTTTTTATTGGTTTTTGATATTTT GAAAAATTGATGTTTTGTGATTTTTTAGCCAAAAAAAAACCAAAAAATAAAAATAATAAAAAAAC AAAAAATTTTTCTTTTACATGGTTTTTAAAAAAATACATCCTAGC Right flanking sequence: Indices 4806081 -- 4806580 TCAATTTTTTGTTATTTTTTTGGTTCAAAATTTTTTTTTGGTCTCAACCTGGATGCGACAACATT TTTCCAATTTTTAAATTTCGCGAAAAAACTACTAAAATGGCTGAATTATTATTGAACTCCCATGA AAATGAATAACCAATTTTTGATAATTTTGTGGAAAAAATGTCAAAAAAATGGGCAAAAGGTATTT CAAATCAAATTTCTATTTAAAAAAAAAGAATTTAGCCAGTAAACGCAAAAATGTCAAAACTAGGT AATTTTGTTTTGGCGGGAATTCCAAATTAAATAGAATTTTTGCAAAAAAAAATTACAAAACCATT ATTTAAAAAGTTTAGAAGTATTATATTTTTAAATATTTTTAGAGTTATATTCGTTCATAAATCAG GTATGAAAAATTTTGAAGCAAAAAACGATACATGGGTTTTGAAGAAATGTTTTTTTTTTGGACAT GTTTTTTCAAATTTTATAGAATGGCAGAAACACTTTTTATGTATC Found at i:4806268 original size:11 final size:11 Alignment explanation
Indices: 4806243--4806268 Score: 36 Period size: 11 Copynumber: 2.3 Consensus size: 11 4806233 AATTTTGTGG * 4806243 AAAAAATGTCA 1 AAAAAATGGCA 4806254 AAAAAATGGGCA 1 AAAAAAT-GGCA 4806266 AAA 1 AAA 4806269 GGTATTTCAA Statistics Matches: 13, Mismatches: 1, Indels: 1 0.87 0.07 0.07 Matches are distributed among these distances: 11 7 0.54 12 6 0.46 ACGTcount: A:0.65, C:0.08, G:0.15, T:0.12 Consensus pattern (11 bp): AAAAAATGGCA Left flanking sequence: Indices 4805743 -- 4806242 GTTTTCGTCATGGAATTGTCTGGAATTAGAGGGATTTAGAATTTGAGAATAGTATTCGGCTGTGG AAAAAAAGTTGCAGAAAAAACGAAAAATTCAAGTTTCAAGATGGAAAATTGAATATTAAAAATTA AAAATTGAAATGGGTCGTTGTCCCAAGAGCTGGAATTTTTGGTTTTTATTGGTTTTTGATATTTT GAAAAATTGATGTTTTGTGATTTTTTAGCCAAAAAAAAACCAAAAAATAAAAATAATAAAAAAAC AAAAAATTTTTCTTTTACATGGTTTTTAAAAAAATACATCCTAGCATTTTTTTTTTTTTAATTGT TTTTTTGTAAATTTCAATTTTTTGTTATTTTTTTGGTTCAAAATTTTTTTTTGGTCTCAACCTGG ATGCGACAACATTTTTCCAATTTTTAAATTTCGCGAAAAAACTACTAAAATGGCTGAATTATTAT TGAACTCCCATGAAAATGAATAACCAATTTTTGATAATTTTGTGG Right flanking sequence: Indices 4806269 -- 4806768 GGTATTTCAAATCAAATTTCTATTTAAAAAAAAAGAATTTAGCCAGTAAACGCAAAAATGTCAAA ACTAGGTAATTTTGTTTTGGCGGGAATTCCAAATTAAATAGAATTTTTGCAAAAAAAAATTACAA AACCATTATTTAAAAAGTTTAGAAGTATTATATTTTTAAATATTTTTAGAGTTATATTCGTTCAT AAATCAGGTATGAAAAATTTTGAAGCAAAAAACGATACATGGGTTTTGAAGAAATGTTTTTTTTT TGGACATGTTTTTTCAAATTTTATAGAATGGCAGAAACACTTTTTATGTATCAAAAATATAATAA TGAGAACTAATACGAAAACTATTTTATTTGCCGCAAAAGTTGCGATTCTCAAAAGTTTCATAAAG AAATGCGATTATACAAATACTTAATAAGAATGCAGGTGGTCAGACACAGTCACAATAATACCCAG AAATCATAAAAAATACAATTGCTGTTGTTGGCCTAAAAATATGAA Found at i:4806917 original size:13 final size:13 Alignment explanation
Indices: 4806892--4806917 Score: 38 Period size: 13 Copynumber: 2.0 Consensus size: 13 4806882 TATGGCAGTG * * 4806892 AAATGAAATAGAA 1 AAAAGAAAAAGAA 4806905 AAAAGAAAAAGAA 1 AAAAGAAAAAGAA 4806918 GTGAGATTGG Statistics Matches: 11, Mismatches: 2, Indels: 0 0.85 0.15 0.00 Matches are distributed among these distances: 13 11 1.00 ACGTcount: A:0.77, C:0.00, G:0.15, T:0.08 Consensus pattern (13 bp): AAAAGAAAAAGAA Left flanking sequence: Indices 4806392 -- 4806891 ATTACAAAACCATTATTTAAAAAGTTTAGAAGTATTATATTTTTAAATATTTTTAGAGTTATATT CGTTCATAAATCAGGTATGAAAAATTTTGAAGCAAAAAACGATACATGGGTTTTGAAGAAATGTT TTTTTTTTGGACATGTTTTTTCAAATTTTATAGAATGGCAGAAACACTTTTTATGTATCAAAAAT ATAATAATGAGAACTAATACGAAAACTATTTTATTTGCCGCAAAAGTTGCGATTCTCAAAAGTTT CATAAAGAAATGCGATTATACAAATACTTAATAAGAATGCAGGTGGTCAGACACAGTCACAATAA TACCCAGAAATCATAAAAAATACAATTGCTGTTGTTGGCCTAAAAATATGAAAAGGTGAGAGAGA GAGTGAGGAAGAATCAAAGACGCAGAGAGAAAAAGACGAAGAAGGTGTGAAAAGTCGAGGGTGTC TCATGTGGAAAGTCAGTTTGGTTGTGTGATCAGAATATGGCAGTG Right flanking sequence: Indices 4806918 -- 4807417 GTGAGATTGGTGTATGGGATATGATAATAAGTGATAACGTTCAGACCTTTTCGCAGTTTGTTTTT AACAATCTCGTTTCGACAGTTCTTTTGCAGAATATTCTTTGGTTTTAGAACTTAGGTTGTAGTCT TAAATAAATGAACACAATTTCCAATTAAGTACTTTATATCTAACAGCGGTCGTAACCTACCGTAA TTTGTGTAGACTACGGTACCCAGCGCTGGGAAAATGTTAACAGTGTTCAAGGTTAGGGCGGCAGA CGATTTTTTCCAGCAAATCGGCAAATTGGCAAACTGCTGGAATTGAAATTTCCGGCAAATCGGCA AATTAGCGGAATTGCAAATTTCCGGCAAATTGTCAAACCGCAAATTGCCCATTTGCCGAATTTGC CGGAAAACGGCAATTGTCGAAAATTTTCGGCAAATTGTGGTTTTGCACTCTTTTTTTTTTTGAAA ATTACAGAAAAAATTTCAATCGGCAAAAGTGTACGCATTCTATTA Found at i:4807243 original size:34 final size:35 Alignment explanation
Indices: 4807196--4807280 Score: 126 Period size: 34 Copynumber: 2.5 Consensus size: 35 4807186 TCCAGCAAAT 4807196 CGGCAAATTGGCAAACT-GCTGGAATTG-AAATTTC 1 CGGCAAATTGGCAAACTAGC-GGAATTGCAAATTTC * * 4807230 CGGCAAATCGGCAAATTAGCGGAATTGCAAATTTC 1 CGGCAAATTGGCAAACTAGCGGAATTGCAAATTTC * 4807265 CGGCAAATTGTCAAAC 1 CGGCAAATTGGCAAAC 4807281 CGCAAATTGC Statistics Matches: 44, Mismatches: 5, Indels: 3 0.85 0.10 0.06 Matches are distributed among these distances: 34 22 0.50 35 22 0.50 ACGTcount: A:0.34, C:0.20, G:0.22, T:0.24 Consensus pattern (35 bp): CGGCAAATTGGCAAACTAGCGGAATTGCAAATTTC Left flanking sequence: Indices 4806696 -- 4807195 GGTCAGACACAGTCACAATAATACCCAGAAATCATAAAAAATACAATTGCTGTTGTTGGCCTAAA AATATGAAAAGGTGAGAGAGAGAGTGAGGAAGAATCAAAGACGCAGAGAGAAAAAGACGAAGAAG GTGTGAAAAGTCGAGGGTGTCTCATGTGGAAAGTCAGTTTGGTTGTGTGATCAGAATATGGCAGT GAAATGAAATAGAAAAAAGAAAAAGAAGTGAGATTGGTGTATGGGATATGATAATAAGTGATAAC GTTCAGACCTTTTCGCAGTTTGTTTTTAACAATCTCGTTTCGACAGTTCTTTTGCAGAATATTCT TTGGTTTTAGAACTTAGGTTGTAGTCTTAAATAAATGAACACAATTTCCAATTAAGTACTTTATA TCTAACAGCGGTCGTAACCTACCGTAATTTGTGTAGACTACGGTACCCAGCGCTGGGAAAATGTT AACAGTGTTCAAGGTTAGGGCGGCAGACGATTTTTTCCAGCAAAT Right flanking sequence: Indices 4807281 -- 4807780 CGCAAATTGCCCATTTGCCGAATTTGCCGGAAAACGGCAATTGTCGAAAATTTTCGGCAAATTGT GGTTTTGCACTCTTTTTTTTTTTGAAAATTACAGAAAAAATTTCAATCGGCAAAAGTGTACGCAT TCTATTAATGTTCTTACATATATTTTGAAAAGTAAGTAAATTCTATAAAAATATTAAAGAAAGCG GGAAAACAATTAAAAAAAGACACAGTTTTAAGTGTTTCCGTCCTATAAAAAAACGCCTCTGAACA TACAAATCTGATATCCGGCAAACGGCAAACCGGCATATCGGCAAACCGGCAATAAACCGGAAATT TGCGGATTTGCCGAACTTGTCGACAAAAAAATTTGCCAAACGGCAATTGCCGCCCACCCCTGGTT GTACATCGAAACTGTATTAATGATGAAAAAATTGCAATTTGAAAAAGTTGGTTTTTCCTGTCAGA CCCCATATAGTTTTTTCTCAAACTCTAACTTTCTCGGTGCTGAAT Found at i:4807599 original size:11 final size:11 Alignment explanation
Indices: 4807583--4807604 Score: 37 Period size: 11 Copynumber: 2.0 Consensus size: 11 4807573 GCATATCGGC * 4807583 AAACCGGCAAT 1 AAACCGGAAAT 4807594 AAACCGGAAAT 1 AAACCGGAAAT 4807605 TTGCGGATTT Statistics Matches: 10, Mismatches: 1, Indels: 0 0.91 0.09 0.00 Matches are distributed among these distances: 11 10 1.00 ACGTcount: A:0.50, C:0.23, G:0.18, T:0.09 Consensus pattern (11 bp): AAACCGGAAAT Left flanking sequence: Indices 4807083 -- 4807582 ATATCTAACAGCGGTCGTAACCTACCGTAATTTGTGTAGACTACGGTACCCAGCGCTGGGAAAAT GTTAACAGTGTTCAAGGTTAGGGCGGCAGACGATTTTTTCCAGCAAATCGGCAAATTGGCAAACT GCTGGAATTGAAATTTCCGGCAAATCGGCAAATTAGCGGAATTGCAAATTTCCGGCAAATTGTCA AACCGCAAATTGCCCATTTGCCGAATTTGCCGGAAAACGGCAATTGTCGAAAATTTTCGGCAAAT TGTGGTTTTGCACTCTTTTTTTTTTTGAAAATTACAGAAAAAATTTCAATCGGCAAAAGTGTACG CATTCTATTAATGTTCTTACATATATTTTGAAAAGTAAGTAAATTCTATAAAAATATTAAAGAAA GCGGGAAAACAATTAAAAAAAGACACAGTTTTAAGTGTTTCCGTCCTATAAAAAAACGCCTCTGA ACATACAAATCTGATATCCGGCAAACGGCAAACCGGCATATCGGC Right flanking sequence: Indices 4807605 -- 4808104 TTGCGGATTTGCCGAACTTGTCGACAAAAAAATTTGCCAAACGGCAATTGCCGCCCACCCCTGGT TGTACATCGAAACTGTATTAATGATGAAAAAATTGCAATTTGAAAAAGTTGGTTTTTCCTGTCAG ACCCCATATAGTTTTTTCTCAAACTCTAACTTTCTCGGTGCTGAATTTTAAATGTATGTAGATTG AAATATTTTCTATTTGGTTACAAAAAGGGCTTTGTCGTGAATCTTGTAGAAACACAACAAATGTT TTTAAAAAATTGATCGATTATGATCGATAAAACTGAAAAATGGTGAAAATGTTTTCACCACTTTT TGACTGTAAAATAAAGAAAGTTTCCAAACATTTTCAAAACGTTTTACTAAAAAATTTGGCACAAT ATAACCTATTGTAAGCAAATTCCAATGACCGGAAAAACTCCCAAAAATTCTCCAAAAAATGGGAA AAAAAAATCAAAGTAGACTTCGCCCAAATATTGGCTAAATTTTTT Found at i:4807969 original size:11 final size:11 Alignment explanation
Indices: 4807950--4807974 Score: 36 Period size: 11 Copynumber: 2.3 Consensus size: 11 4807940 ATAAAGAAAG * 4807950 TTTCCAAACAT 1 TTTCAAAACAT * 4807961 TTTCAAAACGT 1 TTTCAAAACAT 4807972 TTT 1 TTT 4807975 ACTAAAAAAT Statistics Matches: 12, Mismatches: 2, Indels: 0 0.86 0.14 0.00 Matches are distributed among these distances: 11 12 1.00 ACGTcount: A:0.32, C:0.20, G:0.04, T:0.44 Consensus pattern (11 bp): TTTCAAAACAT Left flanking sequence: Indices 4807450 -- 4807949 ATTCTATAAAAATATTAAAGAAAGCGGGAAAACAATTAAAAAAAGACACAGTTTTAAGTGTTTCC GTCCTATAAAAAAACGCCTCTGAACATACAAATCTGATATCCGGCAAACGGCAAACCGGCATATC GGCAAACCGGCAATAAACCGGAAATTTGCGGATTTGCCGAACTTGTCGACAAAAAAATTTGCCAA ACGGCAATTGCCGCCCACCCCTGGTTGTACATCGAAACTGTATTAATGATGAAAAAATTGCAATT TGAAAAAGTTGGTTTTTCCTGTCAGACCCCATATAGTTTTTTCTCAAACTCTAACTTTCTCGGTG CTGAATTTTAAATGTATGTAGATTGAAATATTTTCTATTTGGTTACAAAAAGGGCTTTGTCGTGA ATCTTGTAGAAACACAACAAATGTTTTTAAAAAATTGATCGATTATGATCGATAAAACTGAAAAA TGGTGAAAATGTTTTCACCACTTTTTGACTGTAAAATAAAGAAAG Right flanking sequence: Indices 4807975 -- 4808474 ACTAAAAAATTTGGCACAATATAACCTATTGTAAGCAAATTCCAATGACCGGAAAAACTCCCAAA AATTCTCCAAAAAATGGGAAAAAAAAATCAAAGTAGACTTCGCCCAAATATTGGCTAAATTTTTT GTGCGAAGTAAAAATGCTACCAGAAAAATATAATTAAATTATTGAGATCAATAAAGGAAAATATC AATACTCTCGTTCTCACACGACAAAAATATTTGCCTCTCCCCCTTCTCAAGTTAGTCATAAGATC TGGGCAAACGGAAAAAATTGGGTTTTTGACAGGTGCAAAATATGTGCTTTTTCGCAATTCACTGC AATTCACAATACTCTTAAAATCAGAACTATTAATCTCAGATATCAAGATTTTGTTTCCGTGTGAC TTTCAGAATTTGCGGTAAAAATTAGGAACATTTAAAAAACGAGTCGAAAAAAGTGCCCGCTTCCC CTGGAGGTCAAGAGCTTCAAGAGCGACCGTTATGCGCACTAGCTA Found at i:4810126 original size:13 final size:13 Alignment explanation
Indices: 4810108--4810135 Score: 42 Period size: 13 Copynumber: 2.2 Consensus size: 13 4810098 AATTTACAAA 4810108 TTTTTTCATATTT 1 TTTTTTCATATTT * * 4810121 TTTTTTCGTTTTT 1 TTTTTTCATATTT 4810134 TT 1 TT 4810136 CCGAATTTCA Statistics Matches: 13, Mismatches: 2, Indels: 0 0.87 0.13 0.00 Matches are distributed among these distances: 13 13 1.00 ACGTcount: A:0.07, C:0.07, G:0.04, T:0.82 Consensus pattern (13 bp): TTTTTTCATATTT Left flanking sequence: Indices 4809608 -- 4810107 TTTTTTCACAGTTTTGAAAATTTTGATGCATTTTTAAAATACATATTACGAAAACACAAAATTCT GAGAATGCGTATTGCACAATATATTTGACGCGCAAAATATTTCGCAGCGAAAACTACAGTAATCC GTCAAGCCCGTAAATCGACACAAGCGCTACAGTAGTCATTTAACGAATTACGGTAGTTTTCGCTA CGAGATATTTTGCGCGGTAAATGTGTTGCGCAATACGTATTCTTATAAATTTTTGTGTTTCCGAA ATAATATAACAGAAATGGGTTGAAACAAAAACAATGAATTGAAAATTACAGTACTCCTTAAAGGC GCATACACTTTTTAAATTAAGACAATCGGTCGCTTCGAGACCTGGAACAGTATTACTCGCTATGT AGCCGAGAAAAGAGAAGAAAAAACGCGGCCACCAATTGTCTTTTTTGCTTTTTCTTCCGATAAAT CGCATAACTAATAGAAAACTGGCGAATTTTGAATTAATTTACAAA Right flanking sequence: Indices 4810136 -- 4810635 CCGAATTTCATTTAGCAAGTCTCGACGAAAACAATAATTAATTAATTTTTTTCACACGGAACCAA CCAATTTTTTAGATGAAAACCGCGAAAAACACAAAATTCTCAATAGAGCGCGTTTCCTACCACAC CAGAATTTCAGAATACTATGAATGTGTAATAAGAAGCTCAAATTTCGAGGCTCTCTGCAGTAAAT GTTTGCATTTGTTTCATAATCCAATAATGAACAAAAAACAGCTAAAAGATCAAAAATCGATAATA ATCTGGCGGGAAAGTGTGAGATTTTGTGACCAATGTTGGCATGGGAAAACGAAAAAATGATGACA AAAAAATAAAATAATTATACATTAAAAAAATGTAAGATCAAAACCGAAAATTTTGTGACAAAGTT GTAGCCGAACTCCAGAGCTCAGACACTTTGTGCTCATTTTCTATTGCTCAACTTTAAACTGGTTC GAAATGCGGGACTCCTCGTTGCTGGCGGGCTCATTGAGCATGAAG Found at i:4811238 original size:19 final size:19 Alignment explanation
Indices: 4811207--4811250 Score: 53 Period size: 19 Copynumber: 2.3 Consensus size: 19 4811197 CGAAACTGGG * * * 4811207 TTTTTCGGTAAAAAAAATT 1 TTTTTTGGCAAAAAAAAGT * * 4811226 TTTTTTGGCAAAAACAGGT 1 TTTTTTGGCAAAAAAAAGT 4811245 TTTTTT 1 TTTTTT 4811251 TTTGTTTTTT Statistics Matches: 20, Mismatches: 5, Indels: 0 0.80 0.20 0.00 Matches are distributed among these distances: 19 20 1.00 ACGTcount: A:0.32, C:0.07, G:0.14, T:0.48 Consensus pattern (19 bp): TTTTTTGGCAAAAAAAAGT Left flanking sequence: Indices 4810707 -- 4811206 GAGGGAGGGAGAGAGTGCACACAAGCTTCACACACACACACACTTGGTTTATTTGAGTATCAGAG AAACATATGAGATTGGCGGAAGAAGACGGAATATTTGAATTGATGGATATTACACGAAAAAAAAA TGATATCGAAAATTTAAAATTACAAGTGAAAATTGGGAAATTACACGGAATTTTTGATGGATAAT AATAATAATAATAATTTATTTCGGGACGATATGCAGCTTTTTCGATATTTCTCCATGTAGTCCGT TGTTTCCGACGGCCTGAAAACGTTAAATTTGAAGTTATTTCTAAAAATTCGGGTAAAATATAGTT TTTTATTTAAATTTTATTTTTTATGGGCATTTACATGATTTTTTTGTTGTAAAAATTAGATTTTT TGGTTTTTTGGGCCAAAAACAGATTTTTTGGTTTTTTTTTTGGAAAAAGTATTTTTTGAAAGTTG GCTTTTTGAGGAAAGAATTTTTTCTAGATTTTCAGCGAAACTGGG Right flanking sequence: Indices 4811251 -- 4811750 TTTGTTTTTTTTTTCTGGGAAAATATATTTTCAAATTTTTATTTGGGAAAGGAATTTTTCTATTT TAGTTTTTTGGCAAAACTTGAATTTTTTGGTTTTTTTTTGAGTTTTCAGCTTTTTTTAATCGGAG TAAATGGGTTTTTTCGAGAAAAAAATTTTTTTGGACTGTTTTTGACAAAAATTAATTTTTTGGCA AGAATTGGTTTTTTGTTTTGGCAAAATATTTTTCTGGCAAAATTTTTTTTTTGGTTTTTTTTTTC AATAATGGATTTTCAGTTTTTTGCCGGAAACAAGGATTTTTTTAAATTTTTTTTTTGGCAAAAAT AGTTGTTTTTTTGTTGAAAATGGTCTTTTATGAATTCTTCTGGTTTTTTCTTTGAAAAACAGATT TTAAACTTTTTTTGAAGAAAAATAATGTTTTTTTTTCTTCAAAAACATGGATTTTTTTGTCTTCT TTTTTTTTGAAAAAATTTGATGTTTCGGCATTTTTAGCCGAAGAA Found at i:4811259 original size:11 final size:11 Alignment explanation
Indices: 4811243--4811264 Score: 44 Period size: 11 Copynumber: 2.0 Consensus size: 11 4811233 GCAAAAACAG 4811243 GTTTTTTTTTT 1 GTTTTTTTTTT 4811254 GTTTTTTTTTT 1 GTTTTTTTTTT 4811265 CTGGGAAAAT Statistics Matches: 11, Mismatches: 0, Indels: 0 1.00 0.00 0.00 Matches are distributed among these distances: 11 11 1.00 ACGTcount: A:0.00, C:0.00, G:0.09, T:0.91 Consensus pattern (11 bp): GTTTTTTTTTT Left flanking sequence: Indices 4810743 -- 4811242 CACACACTTGGTTTATTTGAGTATCAGAGAAACATATGAGATTGGCGGAAGAAGACGGAATATTT GAATTGATGGATATTACACGAAAAAAAAATGATATCGAAAATTTAAAATTACAAGTGAAAATTGG GAAATTACACGGAATTTTTGATGGATAATAATAATAATAATAATTTATTTCGGGACGATATGCAG CTTTTTCGATATTTCTCCATGTAGTCCGTTGTTTCCGACGGCCTGAAAACGTTAAATTTGAAGTT ATTTCTAAAAATTCGGGTAAAATATAGTTTTTTATTTAAATTTTATTTTTTATGGGCATTTACAT GATTTTTTTGTTGTAAAAATTAGATTTTTTGGTTTTTTGGGCCAAAAACAGATTTTTTGGTTTTT TTTTTGGAAAAAGTATTTTTTGAAAGTTGGCTTTTTGAGGAAAGAATTTTTTCTAGATTTTCAGC GAAACTGGGTTTTTCGGTAAAAAAAATTTTTTTTGGCAAAAACAG Right flanking sequence: Indices 4811265 -- 4811764 CTGGGAAAATATATTTTCAAATTTTTATTTGGGAAAGGAATTTTTCTATTTTAGTTTTTTGGCAA AACTTGAATTTTTTGGTTTTTTTTTGAGTTTTCAGCTTTTTTTAATCGGAGTAAATGGGTTTTTT CGAGAAAAAAATTTTTTTGGACTGTTTTTGACAAAAATTAATTTTTTGGCAAGAATTGGTTTTTT GTTTTGGCAAAATATTTTTCTGGCAAAATTTTTTTTTTGGTTTTTTTTTTCAATAATGGATTTTC AGTTTTTTGCCGGAAACAAGGATTTTTTTAAATTTTTTTTTTGGCAAAAATAGTTGTTTTTTTGT TGAAAATGGTCTTTTATGAATTCTTCTGGTTTTTTCTTTGAAAAACAGATTTTAAACTTTTTTTG AAGAAAAATAATGTTTTTTTTTCTTCAAAAACATGGATTTTTTTGTCTTCTTTTTTTTTGAAAAA ATTTGATGTTTCGGCATTTTTAGCCGAAGAAAAATATTTTTTGGT Found at i:4811354 original size:11 final size:12 Alignment explanation
Indices: 4811338--4811361 Score: 41 Period size: 11 Copynumber: 2.1 Consensus size: 12 4811328 AAAACTTGAA 4811338 TTTTTTG-GTTT 1 TTTTTTGAGTTT 4811349 TTTTTTGAGTTT 1 TTTTTTGAGTTT 4811361 T 1 T 4811362 CAGCTTTTTT Statistics Matches: 12, Mismatches: 0, Indels: 1 0.92 0.00 0.08 Matches are distributed among these distances: 11 7 0.58 12 5 0.42 ACGTcount: A:0.04, C:0.00, G:0.17, T:0.79 Consensus pattern (12 bp): TTTTTTGAGTTT Left flanking sequence: Indices 4810838 -- 4811337 GATATCGAAAATTTAAAATTACAAGTGAAAATTGGGAAATTACACGGAATTTTTGATGGATAATA ATAATAATAATAATTTATTTCGGGACGATATGCAGCTTTTTCGATATTTCTCCATGTAGTCCGTT GTTTCCGACGGCCTGAAAACGTTAAATTTGAAGTTATTTCTAAAAATTCGGGTAAAATATAGTTT TTTATTTAAATTTTATTTTTTATGGGCATTTACATGATTTTTTTGTTGTAAAAATTAGATTTTTT GGTTTTTTGGGCCAAAAACAGATTTTTTGGTTTTTTTTTTGGAAAAAGTATTTTTTGAAAGTTGG CTTTTTGAGGAAAGAATTTTTTCTAGATTTTCAGCGAAACTGGGTTTTTCGGTAAAAAAAATTTT TTTTGGCAAAAACAGGTTTTTTTTTTGTTTTTTTTTTCTGGGAAAATATATTTTCAAATTTTTAT TTGGGAAAGGAATTTTTCTATTTTAGTTTTTTGGCAAAACTTGAA Right flanking sequence: Indices 4811362 -- 4811861 CAGCTTTTTTTAATCGGAGTAAATGGGTTTTTTCGAGAAAAAAATTTTTTTGGACTGTTTTTGAC AAAAATTAATTTTTTGGCAAGAATTGGTTTTTTGTTTTGGCAAAATATTTTTCTGGCAAAATTTT TTTTTTGGTTTTTTTTTTCAATAATGGATTTTCAGTTTTTTGCCGGAAACAAGGATTTTTTTAAA TTTTTTTTTTGGCAAAAATAGTTGTTTTTTTGTTGAAAATGGTCTTTTATGAATTCTTCTGGTTT TTTCTTTGAAAAACAGATTTTAAACTTTTTTTGAAGAAAAATAATGTTTTTTTTTCTTCAAAAAC ATGGATTTTTTTGTCTTCTTTTTTTTTGAAAAAATTTGATGTTTCGGCATTTTTAGCCGAAGAAA AATATTTTTTGGTTTTTTTGGCGAATATGATTTTTTTCGGAAAAAAATAGTTGCAAAAAAATCGA TTCGAAAAAATAAATAGTTTTTGTTTTGGCAAAAATTGATTTTTC Found at i:4811356 original size:20 final size:20 Alignment explanation
Indices: 4811333--4811372 Score: 52 Period size: 20 Copynumber: 2.0 Consensus size: 20 4811323 TTGGCAAAAC ** * 4811333 TTGAATTTTTTGGTTTTTTT 1 TTGAATTTTCAGCTTTTTTT * 4811353 TTGAGTTTTCAGCTTTTTTT 1 TTGAATTTTCAGCTTTTTTT 4811373 AATCGGAGTA Statistics Matches: 16, Mismatches: 4, Indels: 0 0.80 0.20 0.00 Matches are distributed among these distances: 20 16 1.00 ACGTcount: A:0.10, C:0.05, G:0.15, T:0.70 Consensus pattern (20 bp): TTGAATTTTCAGCTTTTTTT Left flanking sequence: Indices 4810833 -- 4811332 AAAATGATATCGAAAATTTAAAATTACAAGTGAAAATTGGGAAATTACACGGAATTTTTGATGGA TAATAATAATAATAATAATTTATTTCGGGACGATATGCAGCTTTTTCGATATTTCTCCATGTAGT CCGTTGTTTCCGACGGCCTGAAAACGTTAAATTTGAAGTTATTTCTAAAAATTCGGGTAAAATAT AGTTTTTTATTTAAATTTTATTTTTTATGGGCATTTACATGATTTTTTTGTTGTAAAAATTAGAT TTTTTGGTTTTTTGGGCCAAAAACAGATTTTTTGGTTTTTTTTTTGGAAAAAGTATTTTTTGAAA GTTGGCTTTTTGAGGAAAGAATTTTTTCTAGATTTTCAGCGAAACTGGGTTTTTCGGTAAAAAAA ATTTTTTTTGGCAAAAACAGGTTTTTTTTTTGTTTTTTTTTTCTGGGAAAATATATTTTCAAATT TTTATTTGGGAAAGGAATTTTTCTATTTTAGTTTTTTGGCAAAAC Right flanking sequence: Indices 4811373 -- 4811872 AATCGGAGTAAATGGGTTTTTTCGAGAAAAAAATTTTTTTGGACTGTTTTTGACAAAAATTAATT TTTTGGCAAGAATTGGTTTTTTGTTTTGGCAAAATATTTTTCTGGCAAAATTTTTTTTTTGGTTT TTTTTTTCAATAATGGATTTTCAGTTTTTTGCCGGAAACAAGGATTTTTTTAAATTTTTTTTTTG GCAAAAATAGTTGTTTTTTTGTTGAAAATGGTCTTTTATGAATTCTTCTGGTTTTTTCTTTGAAA AACAGATTTTAAACTTTTTTTGAAGAAAAATAATGTTTTTTTTTCTTCAAAAACATGGATTTTTT TGTCTTCTTTTTTTTTGAAAAAATTTGATGTTTCGGCATTTTTAGCCGAAGAAAAATATTTTTTG GTTTTTTTGGCGAATATGATTTTTTTCGGAAAAAAATAGTTGCAAAAAAATCGATTCGAAAAAAT AAATAGTTTTTGTTTTGGCAAAAATTGATTTTTCGTATTTCTTTA Found at i:4811442 original size:18 final size:18 Alignment explanation
Indices: 4811419--4811460 Score: 56 Period size: 18 Copynumber: 2.3 Consensus size: 18 4811409 TTTTGGACTG 4811419 TTTTTGACAAAAATTAAT 1 TTTTTGACAAAAATTAAT * * ** 4811437 TTTTTGGCAAGAATTGGT 1 TTTTTGACAAAAATTAAT 4811455 TTTTTG 1 TTTTTG 4811461 TTTTGGCAAA Statistics Matches: 20, Mismatches: 4, Indels: 0 0.83 0.17 0.00 Matches are distributed among these distances: 18 20 1.00 ACGTcount: A:0.29, C:0.05, G:0.17, T:0.50 Consensus pattern (18 bp): TTTTTGACAAAAATTAAT Left flanking sequence: Indices 4810919 -- 4811418 ATTTCGGGACGATATGCAGCTTTTTCGATATTTCTCCATGTAGTCCGTTGTTTCCGACGGCCTGA AAACGTTAAATTTGAAGTTATTTCTAAAAATTCGGGTAAAATATAGTTTTTTATTTAAATTTTAT TTTTTATGGGCATTTACATGATTTTTTTGTTGTAAAAATTAGATTTTTTGGTTTTTTGGGCCAAA AACAGATTTTTTGGTTTTTTTTTTGGAAAAAGTATTTTTTGAAAGTTGGCTTTTTGAGGAAAGAA TTTTTTCTAGATTTTCAGCGAAACTGGGTTTTTCGGTAAAAAAAATTTTTTTTGGCAAAAACAGG TTTTTTTTTTGTTTTTTTTTTCTGGGAAAATATATTTTCAAATTTTTATTTGGGAAAGGAATTTT TCTATTTTAGTTTTTTGGCAAAACTTGAATTTTTTGGTTTTTTTTTGAGTTTTCAGCTTTTTTTA ATCGGAGTAAATGGGTTTTTTCGAGAAAAAAATTTTTTTGGACTG Right flanking sequence: Indices 4811461 -- 4811960 TTTTGGCAAAATATTTTTCTGGCAAAATTTTTTTTTTGGTTTTTTTTTTCAATAATGGATTTTCA GTTTTTTGCCGGAAACAAGGATTTTTTTAAATTTTTTTTTTGGCAAAAATAGTTGTTTTTTTGTT GAAAATGGTCTTTTATGAATTCTTCTGGTTTTTTCTTTGAAAAACAGATTTTAAACTTTTTTTGA AGAAAAATAATGTTTTTTTTTCTTCAAAAACATGGATTTTTTTGTCTTCTTTTTTTTTGAAAAAA TTTGATGTTTCGGCATTTTTAGCCGAAGAAAAATATTTTTTGGTTTTTTTGGCGAATATGATTTT TTTCGGAAAAAAATAGTTGCAAAAAAATCGATTCGAAAAAATAAATAGTTTTTGTTTTGGCAAAA ATTGATTTTTCGTATTTCTTTACAAATAATTCAAATTCAAACTTAATTAATTAATTTGAATAAAT TTGATTTAATTTAAATGATTTAAAAAATGTTTTTTGCCAAAAATG Found at i:4813158 original size:12 final size:12 Alignment explanation
Indices: 4813137--4813162 Score: 38 Period size: 12 Copynumber: 2.2 Consensus size: 12 4813127 ATTGGATGAA * 4813137 TTTTTTTCAAGT 1 TTTTTGTCAAGT * 4813149 TTTTTGTCAATT 1 TTTTTGTCAAGT 4813161 TT 1 TT 4813163 GTAGCCCAGG Statistics Matches: 12, Mismatches: 2, Indels: 0 0.86 0.14 0.00 Matches are distributed among these distances: 12 12 1.00 ACGTcount: A:0.15, C:0.08, G:0.08, T:0.69 Consensus pattern (12 bp): TTTTTGTCAAGT Left flanking sequence: Indices 4812637 -- 4813136 GGGATAGCGATTCGGGGAGGTTTCGTCTGAAAAAATTGGGGTTTTAATGGAAAAAATCAAAATTT AGAGATTTTGTTTTAAAAAATTCCAAAAAAGTATATAAATTTAAAAATCAGTTTTCGGAAAGTTA AAAAAAAATATTTTTTTAAAGAAAATATTTAGAGATTTTTTTCAGAATGTTCTTGAAAAATGGTC AGTTATTTTTTAAACTGGCGCCACGTATATTGGAAAAATAAAAAAAATCATTTTTTTGAAAAAAT TTTCGAATTTTATTTTTTTTTGTTGTATTATAATTATTTCATGTCAATTTTTTAAAATAAAAATT ACTAAAATTTTTCAGAATTTGAATGCAAAGCCGCTCAAAAATGCTGTAATTCCCACTCACTGATT TAAAAAAAAAATTAACATTCATGAATTTTCAGCCAAAAAATCGGTGAAATTTAAAAATTAGTTTC AATTTTTCACATTTTTCTACAAAAATTCCCCTGAAATTGGATGAA Right flanking sequence: Indices 4813163 -- 4813662 GTAGCCCAGGAAATAAATTTTTATTTGAAAAAAAAGTACAAAAAATATATATATCTAAAAATCAG ATCTTGGAAAATTTTTGAAAAATTTTTTTTTGCTCAAATTTTCTCAAATACACGTCTGAAAACGA GAGCTATTCTGTTGAAAATTTCATAATTTAGGGATTTTAAATTTTTTTTATTTTTTCTTAAGTTT ACGGCTTCTTTTTTAAACTCCCACCATATTTGAAAAATTTCAGAAAATTTTTTTGTAATTAAAAA AAAATAACTAGAAAGTTTCAGAATTTCAGGACAAAACCGCTCAAAAAAACTAGAATTCCATTTTT TCGATTGCTGTAATTCCAGAAATTAATCAAATTTTGCACATTTTTTCCAGAAAAATTCCTGAAAT TGGATTTTTTTCAAGATTTTGAGAGATTTAGGCCTTTTTTTGTAAATTTTCAACGAAAAAATCCA ATTTTTAGTAGTTCTACTGAAAAAATTGGGGTTTTTCAAAAAAAA Found at i:4813251 original size:11 final size:11 Alignment explanation
Indices: 4813231--4813254 Score: 41 Period size: 11 Copynumber: 2.2 Consensus size: 11 4813221 AAATCAGATC * 4813231 TTGGAAAATTT 1 TTGAAAAATTT 4813242 TTGAAAAATTT 1 TTGAAAAATTT 4813253 TT 1 TT 4813255 TTTTGCTCAA Statistics Matches: 12, Mismatches: 1, Indels: 0 0.92 0.08 0.00 Matches are distributed among these distances: 11 12 1.00 ACGTcount: A:0.38, C:0.00, G:0.12, T:0.50 Consensus pattern (11 bp): TTGAAAAATTT Left flanking sequence: Indices 4812731 -- 4813230 AGTATATAAATTTAAAAATCAGTTTTCGGAAAGTTAAAAAAAAATATTTTTTTAAAGAAAATATT TAGAGATTTTTTTCAGAATGTTCTTGAAAAATGGTCAGTTATTTTTTAAACTGGCGCCACGTATA TTGGAAAAATAAAAAAAATCATTTTTTTGAAAAAATTTTCGAATTTTATTTTTTTTTGTTGTATT ATAATTATTTCATGTCAATTTTTTAAAATAAAAATTACTAAAATTTTTCAGAATTTGAATGCAAA GCCGCTCAAAAATGCTGTAATTCCCACTCACTGATTTAAAAAAAAAATTAACATTCATGAATTTT CAGCCAAAAAATCGGTGAAATTTAAAAATTAGTTTCAATTTTTCACATTTTTCTACAAAAATTCC CCTGAAATTGGATGAATTTTTTTCAAGTTTTTTGTCAATTTTGTAGCCCAGGAAATAAATTTTTA TTTGAAAAAAAAGTACAAAAAATATATATATCTAAAAATCAGATC Right flanking sequence: Indices 4813255 -- 4813754 TTTTGCTCAAATTTTCTCAAATACACGTCTGAAAACGAGAGCTATTCTGTTGAAAATTTCATAAT TTAGGGATTTTAAATTTTTTTTATTTTTTCTTAAGTTTACGGCTTCTTTTTTAAACTCCCACCAT ATTTGAAAAATTTCAGAAAATTTTTTTGTAATTAAAAAAAAATAACTAGAAAGTTTCAGAATTTC AGGACAAAACCGCTCAAAAAAACTAGAATTCCATTTTTTCGATTGCTGTAATTCCAGAAATTAAT CAAATTTTGCACATTTTTTCCAGAAAAATTCCTGAAATTGGATTTTTTTCAAGATTTTGAGAGAT TTAGGCCTTTTTTTGTAAATTTTCAACGAAAAAATCCAATTTTTAGTAGTTCTACTGAAAAAATT GGGGTTTTTCAAAAAAAAAAAAATCATTAAAAAAAAAAAGATTTTTCTCCAAAATCTCCAAGATA GTCTCATATTTAGAAATATAGCAACAAAAAAACCCAACATATTTT Found at i:4816445 original size:12 final size:12 Alignment explanation
Indices: 4816422--4816445 Score: 34 Period size: 12 Copynumber: 2.0 Consensus size: 12 4816412 GCTGTAAAAA 4816422 GTTTAAAAACTT 1 GTTTAAAAACTT * * 4816434 GTTTTAATACTT 1 GTTTAAAAACTT 4816446 AAAATTGTTT Statistics Matches: 10, Mismatches: 2, Indels: 0 0.83 0.17 0.00 Matches are distributed among these distances: 12 10 1.00 ACGTcount: A:0.33, C:0.08, G:0.08, T:0.50 Consensus pattern (12 bp): GTTTAAAAACTT Left flanking sequence: Indices 4815922 -- 4816421 ATATCTTACCTACAACGAATTCTTCAAGTTTTTTAAACGTTGATAGCACTGAGAATTGAGAAAGA TCTTCGATGGAATTTGAAGAAATATCTAGATTTTTGAGATTAGTTGGGCAAATCAGTTTGGTTAT TGTCTGAAATTATAAATATTTGAATTTTTCAATTTTTCGAAAAATAATAAAATTCCTACAGTTAA ATCCGAAATTTTATTGTCAGCCAAGCTTATCGTCTGAAGAGCCACGCACTTGCTCAAATCGGGAA TTTCGTTCAAAAAATTTCCGCTTAAATTCAGAATTTCCAGATTTTTGAGTGAAAACGAGACGGGC GGCTCGATGAGATTGTTTGATAGATCGAGAATTTTCAAATTCTCGAATCTTCCCAATTGATTCGT CTCTTTCAGTTGATTTCTTGCGAGATGGAGTTCTAGTCTGGAAAAAATGGGAAAAATTAGGGATG TAAAGGAAGTTTGGGATTTTATTATGGATGATATAGCTGTAAAAA Right flanking sequence: Indices 4816446 -- 4816945 AAAATTGTTTATTTTTGAAAATAAAAAATAAAAAATTTAAATTTGAAAATTTTTTTTTTAATACC CTTGCTTTTTCGCTAATTTTTTTTCTGACAGAATTCATTGATTTTTCCTAATTTTTTATTTGAAA ATTTCAATTTTTCAGGCAGTTTTCAGCAAAAAAGTGCAATATATGGTTAAATTATCGATTTCTGG CCAATTTTTTTACAGAAAAATTGAAAAATGGTGTTTAAAATCAAATATTTTAGAGAAAAACCTGG AAAACCAATTAAAATAGCCGAAAAATGCGGAAAATCCAGTTTTTTTTTCGTAAAGAAAATTTGAA ATCGGCTTAAAAATTGATAATTTTACATAAAATTTATAATTTTTGCGGAGAAATATCTGAAAAAT TGGAAATTTTACTGTTTATAAATATAAAAACATAAAAAATCGACAAAACTAATAGTAAGAAAAAC CAAATTAATATAAATTTTTTTGAATTTTCTCAAAAATAAAAAAAA Found at i:4817053 original size:11 final size:11 Alignment explanation
Indices: 4817025--4817053 Score: 37 Period size: 11 Copynumber: 2.6 Consensus size: 11 4817015 AATTGAAAAA * ** 4817025 AAAAAACGTTT 1 AAAAAATGTGG 4817036 AAAAAATGTGG 1 AAAAAATGTGG 4817047 AAAAAAT 1 AAAAAAT 4817054 CGATAATTTT Statistics Matches: 15, Mismatches: 3, Indels: 0 0.83 0.17 0.00 Matches are distributed among these distances: 11 15 1.00 ACGTcount: A:0.62, C:0.03, G:0.14, T:0.21 Consensus pattern (11 bp): AAAAAATGTGG Left flanking sequence: Indices 4816525 -- 4817024 AATTTTTTTTCTGACAGAATTCATTGATTTTTCCTAATTTTTTATTTGAAAATTTCAATTTTTCA GGCAGTTTTCAGCAAAAAAGTGCAATATATGGTTAAATTATCGATTTCTGGCCAATTTTTTTACA GAAAAATTGAAAAATGGTGTTTAAAATCAAATATTTTAGAGAAAAACCTGGAAAACCAATTAAAA TAGCCGAAAAATGCGGAAAATCCAGTTTTTTTTTCGTAAAGAAAATTTGAAATCGGCTTAAAAAT TGATAATTTTACATAAAATTTATAATTTTTGCGGAGAAATATCTGAAAAATTGGAAATTTTACTG TTTATAAATATAAAAACATAAAAAATCGACAAAACTAATAGTAAGAAAAACCAAATTAATATAAA TTTTTTTGAATTTTCTCAAAAATAAAAAAAAAAACGTTTTTACAGATTTTTTCCAGCAAATTCGA AAATAATTAGCCATTTTATTTTTTTTTTGTTGAAAAATTGAAAAA Right flanking sequence: Indices 4817054 -- 4817553 CGATAATTTTTTTCCCGATTTTTCAATAATTTCCACTGTTTTCTCTATTTTTAAAACGAAATATT TTTGATTTTTTAGCTTTTTCAATTAAAAAATCGATTTTTTTTCAATTTTCTCTTAAAAAAATCGA ATAAAAATTTTTAAAATGTGTTTAAAAAAAAATATATATCTTACAAATTATAATTAAAATCAGCG ATAAACTTGTTGATTTGACAATCGCGAGCATCGATCTGAAATTTTTTATTTCATTTTCTAATTTA AATTTTTTTAAACTAAATTTCCCTTACAATTTGGCATTTAGGGAATAACTTTATATAGGTAAACT TTTGAAAGCAATTTCCACTAATTTTCAGGTGTTTAACTTCTGAATATTCGGCCGCAAAGCTTTTT TCCAGATTTGTAAGTGATAAATTCGCCAAATCCAGAGTTCCATCCACTTCGACGTCTGCTTTCTC GTTTTGGATTCTGAAAATTTTTAATTTTTTTTTCTGAATTTTATT Found at i:4818038 original size:13 final size:13 Alignment explanation
Indices: 4818016--4818043 Score: 42 Period size: 13 Copynumber: 2.2 Consensus size: 13 4818006 TTTCTGGCAA * 4818016 TTTTTCTCAATTT 1 TTTTTCTCAACTT * 4818029 TTTTTTTCAACTT 1 TTTTTCTCAACTT 4818042 TT 1 TT 4818044 CAGACATTTT Statistics Matches: 13, Mismatches: 2, Indels: 0 0.87 0.13 0.00 Matches are distributed among these distances: 13 13 1.00 ACGTcount: A:0.14, C:0.14, G:0.00, T:0.71 Consensus pattern (13 bp): TTTTTCTCAACTT Left flanking sequence: Indices 4817516 -- 4818015 ATTCTGAAAATTTTTAATTTTTTTTTCTGAATTTTATTACGGGAACACAAAAATTTATAAGAATG CGTATTGCGCAACATATTTGACGCGCAAAATATCTCGTAGCGAAAATTACAGTAATCCATTAAAT GACTACTGTAGCGCTTGTGTGTCGATTTACGGGCTCGTTTTTTATTTATTGATAGAATAATAACA TTTTGCAAAAAAAAATGGGAATATAGTACGAAGAAATGAAGAAAAAGTCAAATTCAAAAATCGAG ATCCCGTAAATCGACAGAAGCGCTACAGTAATCATTTAAAGTATTACTGTAGTTTTCGCTACGAG ATATTTTGCGCGTCAGATATGTTGCAAAATACGCATTTTCAGAATTTTACGTTCCCGTAATTGCT AAAAATTCTTAAAGGTTGAGGATTTTGCATAATAAAATTGTTTTTAGAACAAATTTTTATGACTT TTTAAAATTTGAATTTCCGCGCCATATTTTTGCGTTTTCTGGCAA Right flanking sequence: Indices 4818044 -- 4818543 CAGACATTTTTCCGTTAAAAAAATTAATAACCCCAAAAAAATCAGCTTTTTTTGAGTTTTTTTTT TGCTGCTAAATTCAAAAATTAATACATTTTTTTAATCAGATTTTCCGTTTTTTTTTCCGTTTTTC CGAAAAAAAAAACCAAAATATTCATAATTTTTGCCAAAAATATCGATTGTTTTTCGTTTTTCTGC CAAAATTTCGGTTTCAAAAAAAAAGTTTCTTAAACCATTTTTCGCTGTTTAAAAATTTTATTTTT AATTCTTCAGCCGATTCTCCTCCAAATTCATTTACAACAAACCTTCCACTAGTGACAAATGTGGA ATTTGCCAGCGAACTATTCGCCCGGGAATCATCCAAATTCTCCTTATCATCATCTTCACCGTCGG CGGCGTCGGCGGCGGCTTTTTTCGGTTCGTCTTCTTCGCTCATACTTTAAAATGAATATGAGATC ATGCACAAAATCGAAAATTCTTCAAAAAATCTATAATGGAATGTT Found at i:4818164 original size:12 final size:12 Alignment explanation
Indices: 4818149--4818172 Score: 48 Period size: 12 Copynumber: 2.0 Consensus size: 12 4818139 TTTAATCAGA 4818149 TTTTCCGTTTTT 1 TTTTCCGTTTTT 4818161 TTTTCCGTTTTT 1 TTTTCCGTTTTT 4818173 CCGAAAAAAA Statistics Matches: 12, Mismatches: 0, Indels: 0 1.00 0.00 0.00 Matches are distributed among these distances: 12 12 1.00 ACGTcount: A:0.00, C:0.17, G:0.08, T:0.75 Consensus pattern (12 bp): TTTTCCGTTTTT Left flanking sequence: Indices 4817649 -- 4818148 TACTGTAGCGCTTGTGTGTCGATTTACGGGCTCGTTTTTTATTTATTGATAGAATAATAACATTT TGCAAAAAAAAATGGGAATATAGTACGAAGAAATGAAGAAAAAGTCAAATTCAAAAATCGAGATC CCGTAAATCGACAGAAGCGCTACAGTAATCATTTAAAGTATTACTGTAGTTTTCGCTACGAGATA TTTTGCGCGTCAGATATGTTGCAAAATACGCATTTTCAGAATTTTACGTTCCCGTAATTGCTAAA AATTCTTAAAGGTTGAGGATTTTGCATAATAAAATTGTTTTTAGAACAAATTTTTATGACTTTTT AAAATTTGAATTTCCGCGCCATATTTTTGCGTTTTCTGGCAATTTTTCTCAATTTTTTTTTTCAA CTTTTCAGACATTTTTCCGTTAAAAAAATTAATAACCCCAAAAAAATCAGCTTTTTTTGAGTTTT TTTTTTGCTGCTAAATTCAAAAATTAATACATTTTTTTAATCAGA Right flanking sequence: Indices 4818173 -- 4818672 CCGAAAAAAAAAACCAAAATATTCATAATTTTTGCCAAAAATATCGATTGTTTTTCGTTTTTCTG CCAAAATTTCGGTTTCAAAAAAAAAGTTTCTTAAACCATTTTTCGCTGTTTAAAAATTTTATTTT TAATTCTTCAGCCGATTCTCCTCCAAATTCATTTACAACAAACCTTCCACTAGTGACAAATGTGG AATTTGCCAGCGAACTATTCGCCCGGGAATCATCCAAATTCTCCTTATCATCATCTTCACCGTCG GCGGCGTCGGCGGCGGCTTTTTTCGGTTCGTCTTCTTCGCTCATACTTTAAAATGAATATGAGAT CATGCACAAAATCGAAAATTCTTCAAAAAATCTATAATGGAATGTTGTAAGCCATAATTGTAGAT TTTCTCAGCTCAGCTCAGTGTGCTCAACATTTTCAAATTCATACGATTTGGGGGTCAAAGGAATC AGGGAGACAAGAAAAAACAACCGAAAATGACCGATGATACCGGTA Found at i:4818921 original size:14 final size:14 Alignment explanation
Indices: 4818898--4818925 Score: 42 Period size: 14 Copynumber: 2.0 Consensus size: 14 4818888 ATTATTCTTT * * 4818898 TTTGGAAAAAGAAA 1 TTTAGAAAAAAAAA 4818912 TTTAGAAAAAAAAA 1 TTTAGAAAAAAAAA 4818926 GAATCATGAA Statistics Matches: 12, Mismatches: 2, Indels: 0 0.86 0.14 0.00 Matches are distributed among these distances: 14 12 1.00 ACGTcount: A:0.64, C:0.00, G:0.14, T:0.21 Consensus pattern (14 bp): TTTAGAAAAAAAAA Left flanking sequence: Indices 4818398 -- 4818897 CATCCAAATTCTCCTTATCATCATCTTCACCGTCGGCGGCGTCGGCGGCGGCTTTTTTCGGTTCG TCTTCTTCGCTCATACTTTAAAATGAATATGAGATCATGCACAAAATCGAAAATTCTTCAAAAAA TCTATAATGGAATGTTGTAAGCCATAATTGTAGATTTTCTCAGCTCAGCTCAGTGTGCTCAACAT TTTCAAATTCATACGATTTGGGGGTCAAAGGAATCAGGGAGACAAGAAAAAACAACCGAAAATGA CCGATGATACCGGTAGACGGTACGCTAGGGGAAGGGGAAATTTAATAAAATTTAATGCTAATTCG AAGAAAAAAAGGAAAAATACTGATGATTATGCAAGACAAATTGAGAAAAAAACGGAAAAATAATT GAGAACTGGGTGAAGCGTATACAATAGAACGGTGAGGGCATGATGAGAGTGAGAGTGTCCCTGAG ATACACGCCAAGTGGGGTGCAAAAAAGGCACGAAAATTATTCTTT Right flanking sequence: Indices 4818926 -- 4819425 GAATCATGAAATCATCGTTGAAGAAAATGTATTCGCGTTGCTTATTGCTGCCTGACGATAAGTGA TTCACGCTCCGCACCGACGCCAATGTACACGATCGGCACCTGCAAATGAAAATTTATTGATTTTG TGAGCGGGAAGCCATAGTAATTACATGGCAACAGCTGGGGGTGGCCAATTTTTTTTATTGGAGAT TTTATAAAAAATGTCATATTGCACCATGACTTTCGACATTTTTTAAAATTGAAGTTGGAGTAAAA AATTTATAAATAAAACAATATTTTAATGATTTTTTTTTTCAATTTTGCTAACATAAAAAAAAAGG AGAATTATTTTTGAATTCCCGCGCAAATTAGTATCGTAATTTTTGAGGTTTCTGTTATATTTGAA TTTAAACACCATTTGTCATTTTTCAAAAAATTTTCCGTTAAAAAAACTTGATAACCCGAAAAATA GGTGCTAAAAATCGATAATTTACATAATTTATAATTTTTTTTCGC Found at i:4823500 original size:11 final size:11 Alignment explanation
Indices: 4823481--4823502 Score: 37 Period size: 11 Copynumber: 2.0 Consensus size: 11 4823471 GTTCAAACAA * 4823481 TCAGTTTGCGT 1 TCAGCTTGCGT 4823492 TCAGCTTGCGT 1 TCAGCTTGCGT 4823503 CAGATTTGAA Statistics Matches: 10, Mismatches: 1, Indels: 0 0.91 0.09 0.00 Matches are distributed among these distances: 11 10 1.00 ACGTcount: A:0.09, C:0.23, G:0.27, T:0.41 Consensus pattern (11 bp): TCAGCTTGCGT Left flanking sequence: Indices 4822981 -- 4823480 CATACACTGCCACCAAGTCTCTTGTTTAGAAACGATTCGAGCTCATCGTTGGTCTTAGAAGTGAC GGATCCCATCGGTTTTTTGTATACAGATAGTTATTAGAAATATATAAGCGAGTGAATAACTAGAA AACTCTTCGAGAACCCGGGGGATATTGATGAGGAAGTGATGAGAGACTGAGAAGAAGAAGAAGAA GAAGAACATAACAAAAAATCTTCAGGAAAGTTTTTTTTTACAAAAAAAAAACGACGATCTTCTAT CCAGTCAGTTGTGAGAAGAGAAACTCGATGGATCCTGGATCCGTGTGTAATATCGCTTGGCTCCG AGAGAAGAAGAAGAAAAAAACTCGGGGAAGAAATGAAGAAACTTCGATCGAATTTATATTGTAAA GTTTTCCTGTTTAAATATATCAAAATTCGAAAACGAGGAAATTTTTAAAAATTTCCGTGACAAAA ACCCACTAATTTTTCGCGTTGAAAAGCGAGAGCGAGTTCAAACAA Right flanking sequence: Indices 4823503 -- 4824002 CAGATTTGAAAAAAACACAAAAAATACACACACACACACACACACACATTTCGCAATTTTCTTCC GAGAATCGCGTGTTTCTAGGTTCTCCAGAAACATTTTTGGCGAAAAAAAATGCACAAAAATGCTT ATAATATAAGTTTTTCATAAGCAGAAGAAGTTTGGCAGCAGCGGATTTGAAAGGATAATTATGGG TAACAACAACACCAACCAGTGACGTTTTTTGATAAAAATTTGAAAAAGTACGAAAAAAATGTATT GCGAAAGAGACGAAGCGTATGTACTTCATATCTTTTTGAAAAAAACCAGTTTTTGATAAAGAAAA GTAATATTAAAAACCAAATATCAAAACCAAGGCATGTCCTTGAGAGGCAAAAAAAGCAGAGTATA GAACAGATTCGAACAGAAATGAAAGCAAATAATGTGAATGAATAAATTTTTTTTAAAATTATTTT ATTTAAAATTTGAATTTTAAATTTGCAGAGGGAAAAAATGAATGA Found at i:4823531 original size:11 final size:11 Alignment explanation
Indices: 4823511--4823532 Score: 37 Period size: 11 Copynumber: 2.0 Consensus size: 11 4823501 GTCAGATTTG 4823511 AAAAAAACACA 1 AAAAAAACACA * 4823522 AAAAATACACA 1 AAAAAAACACA 4823533 CACACACACA Statistics Matches: 10, Mismatches: 1, Indels: 0 0.91 0.09 0.00 Matches are distributed among these distances: 11 10 1.00 ACGTcount: A:0.77, C:0.18, G:0.00, T:0.05 Consensus pattern (11 bp): AAAAAAACACA Left flanking sequence: Indices 4823011 -- 4823510 AACGATTCGAGCTCATCGTTGGTCTTAGAAGTGACGGATCCCATCGGTTTTTTGTATACAGATAG TTATTAGAAATATATAAGCGAGTGAATAACTAGAAAACTCTTCGAGAACCCGGGGGATATTGATG AGGAAGTGATGAGAGACTGAGAAGAAGAAGAAGAAGAAGAACATAACAAAAAATCTTCAGGAAAG TTTTTTTTTACAAAAAAAAAACGACGATCTTCTATCCAGTCAGTTGTGAGAAGAGAAACTCGATG GATCCTGGATCCGTGTGTAATATCGCTTGGCTCCGAGAGAAGAAGAAGAAAAAAACTCGGGGAAG AAATGAAGAAACTTCGATCGAATTTATATTGTAAAGTTTTCCTGTTTAAATATATCAAAATTCGA AAACGAGGAAATTTTTAAAAATTTCCGTGACAAAAACCCACTAATTTTTCGCGTTGAAAAGCGAG AGCGAGTTCAAACAATCAGTTTGCGTTCAGCTTGCGTCAGATTTG Right flanking sequence: Indices 4823533 -- 4824032 CACACACACACACACACATTTCGCAATTTTCTTCCGAGAATCGCGTGTTTCTAGGTTCTCCAGAA ACATTTTTGGCGAAAAAAAATGCACAAAAATGCTTATAATATAAGTTTTTCATAAGCAGAAGAAG TTTGGCAGCAGCGGATTTGAAAGGATAATTATGGGTAACAACAACACCAACCAGTGACGTTTTTT GATAAAAATTTGAAAAAGTACGAAAAAAATGTATTGCGAAAGAGACGAAGCGTATGTACTTCATA TCTTTTTGAAAAAAACCAGTTTTTGATAAAGAAAAGTAATATTAAAAACCAAATATCAAAACCAA GGCATGTCCTTGAGAGGCAAAAAAAGCAGAGTATAGAACAGATTCGAACAGAAATGAAAGCAAAT AATGTGAATGAATAAATTTTTTTTAAAATTATTTTATTTAAAATTTGAATTTTAAATTTGCAGAG GGAAAAAATGAATGAACATCCACGCAGAACAGTTAACATGCATGA Found at i:4823957 original size:11 final size:11 Alignment explanation
Indices: 4823935--4823958 Score: 34 Period size: 11 Copynumber: 2.2 Consensus size: 11 4823925 TGTGAATGAA * * 4823935 TAAATTTTTTT 1 TAAAATTATTT 4823946 TAAAATTATTT 1 TAAAATTATTT 4823957 TA 1 TA 4823959 TTTAAAATTT Statistics Matches: 11, Mismatches: 2, Indels: 0 0.85 0.15 0.00 Matches are distributed among these distances: 11 11 1.00 ACGTcount: A:0.38, C:0.00, G:0.00, T:0.62 Consensus pattern (11 bp): TAAAATTATTT Left flanking sequence: Indices 4823435 -- 4823934 AACCCACTAATTTTTCGCGTTGAAAAGCGAGAGCGAGTTCAAACAATCAGTTTGCGTTCAGCTTG CGTCAGATTTGAAAAAAACACAAAAAATACACACACACACACACACACACATTTCGCAATTTTCT TCCGAGAATCGCGTGTTTCTAGGTTCTCCAGAAACATTTTTGGCGAAAAAAAATGCACAAAAATG CTTATAATATAAGTTTTTCATAAGCAGAAGAAGTTTGGCAGCAGCGGATTTGAAAGGATAATTAT GGGTAACAACAACACCAACCAGTGACGTTTTTTGATAAAAATTTGAAAAAGTACGAAAAAAATGT ATTGCGAAAGAGACGAAGCGTATGTACTTCATATCTTTTTGAAAAAAACCAGTTTTTGATAAAGA AAAGTAATATTAAAAACCAAATATCAAAACCAAGGCATGTCCTTGAGAGGCAAAAAAAGCAGAGT ATAGAACAGATTCGAACAGAAATGAAAGCAAATAATGTGAATGAA Right flanking sequence: Indices 4823959 -- 4824458 TTTAAAATTTGAATTTTAAATTTGCAGAGGGAAAAAATGAATGAACATCCACGCAGAACAGTTAA CATGCATGAATATAAATCGTTTGGAGACCACAATGGAGACGAAAAAACATTTTAAACAATGTGTG AAAGAAAAACCGTGATTTTCAACAAATCGTGTGAAATTGTGAGACGGTGATGGTTCCATTATCAC TCGGGTAGCTCCAAAATATTTACAGGAACTATCAAATTTCACAACGCCTAGCTCGATGAAACCAT CACCTTTCGGCACAAAGAACAGAACAAAACAAGCTACTAAATGGGTTGATAAACTATAAAACTAA ATGGCCTAATATATTATGTGGGGAAAAAAACGGGAGAAAATAGGATAACAAAAACATTAAAAATA CAGGAAATGTGGGGGAAAAAAAAAATAAAAAAAGACACGTTGGGGGTTTCTAAAGATCTAAATAA ATTTCTTAGTTTTGCTCCTTCTTTGGCTCCTCGGCGGTCTTGGCC Found at i:4823962 original size:15 final size:15 Alignment explanation
Indices: 4823938--4823967 Score: 53 Period size: 15 Copynumber: 2.0 Consensus size: 15 4823928 GAATGAATAA * 4823938 ATTTTTTTTAAAATT 1 ATTTTATTTAAAATT 4823953 ATTTTATTTAAAATT 1 ATTTTATTTAAAATT 4823968 TGAATTTTAA Statistics Matches: 14, Mismatches: 1, Indels: 0 0.93 0.07 0.00 Matches are distributed among these distances: 15 14 1.00 ACGTcount: A:0.37, C:0.00, G:0.00, T:0.63 Consensus pattern (15 bp): ATTTTATTTAAAATT Left flanking sequence: Indices 4823438 -- 4823937 CCACTAATTTTTCGCGTTGAAAAGCGAGAGCGAGTTCAAACAATCAGTTTGCGTTCAGCTTGCGT CAGATTTGAAAAAAACACAAAAAATACACACACACACACACACACACATTTCGCAATTTTCTTCC GAGAATCGCGTGTTTCTAGGTTCTCCAGAAACATTTTTGGCGAAAAAAAATGCACAAAAATGCTT ATAATATAAGTTTTTCATAAGCAGAAGAAGTTTGGCAGCAGCGGATTTGAAAGGATAATTATGGG TAACAACAACACCAACCAGTGACGTTTTTTGATAAAAATTTGAAAAAGTACGAAAAAAATGTATT GCGAAAGAGACGAAGCGTATGTACTTCATATCTTTTTGAAAAAAACCAGTTTTTGATAAAGAAAA GTAATATTAAAAACCAAATATCAAAACCAAGGCATGTCCTTGAGAGGCAAAAAAAGCAGAGTATA GAACAGATTCGAACAGAAATGAAAGCAAATAATGTGAATGAATAA Right flanking sequence: Indices 4823968 -- 4824467 TGAATTTTAAATTTGCAGAGGGAAAAAATGAATGAACATCCACGCAGAACAGTTAACATGCATGA ATATAAATCGTTTGGAGACCACAATGGAGACGAAAAAACATTTTAAACAATGTGTGAAAGAAAAA CCGTGATTTTCAACAAATCGTGTGAAATTGTGAGACGGTGATGGTTCCATTATCACTCGGGTAGC TCCAAAATATTTACAGGAACTATCAAATTTCACAACGCCTAGCTCGATGAAACCATCACCTTTCG GCACAAAGAACAGAACAAAACAAGCTACTAAATGGGTTGATAAACTATAAAACTAAATGGCCTAA TATATTATGTGGGGAAAAAAACGGGAGAAAATAGGATAACAAAAACATTAAAAATACAGGAAATG TGGGGGAAAAAAAAAATAAAAAAAGACACGTTGGGGGTTTCTAAAGATCTAAATAAATTTCTTAG TTTTGCTCCTTCTTTGGCTCCTCGGCGGTCTTGGCCTCCTGGGCG Found at i:4833415 original size:35 final size:35 Alignment explanation
Indices: 4833353--4833652 Score: 400 Period size: 35 Copynumber: 8.5 Consensus size: 35 4833343 AAATAGCCTG * * ** * * 4833353 TTTGTCGGTTTGCCGGAAAACTACAATTCCGGAAA 1 TTTGCCGGTTTGCCAGAAATTTTCAATTCCGGCAA * * 4833388 TTTGCCGATTTGCCAGAAATTTTCAATTCCAGCAA 1 TTTGCCGGTTTGCCAGAAATTTTCAATTCCGGCAA * ** 4833423 TTTGCCGGTTTGCCAGACATGATCAATTCCGGCAA 1 TTTGCCGGTTTGCCAGAAATTTTCAATTCCGGCAA 4833458 TTTGCCGGTTTGCCAGAAATTTTCAATTCCGGCAA 1 TTTGCCGGTTTGCCAGAAATTTTCAATTCCGGCAA * * * 4833493 TTTGCCGATTTGCCGGAAA-TTTCGATTCCGGCAA 1 TTTGCCGGTTTGCCAGAAATTTTCAATTCCGGCAA * * 4833527 TTTGCCGGTTTGCCAGACATGTTCAATTCCGGCAA 1 TTTGCCGGTTTGCCAGAAATTTTCAATTCCGGCAA * ** * 4833562 TTTGTCGGTTTGCCAGAAATTCCGGCAATTCCAGCAA 1 TTTGCCGGTTTGCCAGAAATT--TTCAATTCCGGCAA * * 4833599 TTTGCCGGTTTGTCAGAAATTTTCAATTCCGTCAA 1 TTTGCCGGTTTGCCAGAAATTTTCAATTCCGGCAA * * * 4833634 TTTGCTGTTTTGCCGGAAA 1 TTTGCCGGTTTGCCAGAAA 4833653 AATCGTTTGC Statistics Matches: 222, Mismatches: 40, Indels: 6 0.83 0.15 0.02 Matches are distributed among these distances: 34 30 0.14 35 162 0.73 37 30 0.14 ACGTcount: A:0.23, C:0.23, G:0.21, T:0.33 Consensus pattern (35 bp): TTTGCCGGTTTGCCAGAAATTTTCAATTCCGGCAA Left flanking sequence: Indices 4832853 -- 4833352 CGCCCTCCTTCTCGAGACACCCACGAATCACCATTTTGGTGGCCTCTTTCCTCGACGCAGTAATG TCTCTCGATTGCTGAAGATGATGATTCATTGGTACAAGAGGACACTATTTGCACCAATTACAACA CTTACCGGAACAGTCATAACATTCTCAAATTTTAGCGTGTGATACATTGCACGACGCAGTTTGTC AGGAGCACCTCCAAAGTCCTTGTCCTCGCAGAGGAAGATGACTCCACGGTGGCGAACGGCATAAA AGTTGATGTAATGCCCCGTGTATTTGTTGATAGACAGATTTCGGAGAAGTCCTCTTCTGCAGACA ATGTCGGCTTCTATCATCTGGAATAAGAATGTTTAATAAAACATCTAGGTGGGCGGCAATTGCAG TTCGGCAAATCGGCAAATTGCCGGTTTGCCGATTTGCCAGAAATTTTCAATGCCGACAATTTGTG GCTTGCCGATCTCTCGGAAATGTTAATTTTTCCGCAAATAGCCTG Right flanking sequence: Indices 4833653 -- 4834152 AATCGTTTGCCATCAATTCTTCTAAAGATAAGGAAGTATCTATATGTGTAATTTGGTATACATCA GAAAAAAAATCCAAAAAAATTACACCCGATTGCCAAAAATTAAAAACCGACATTCGAGATTTGGG TGAAATCTGATGACTAGCCTAAGACTCAGAGACTCAGATAATTTCCTAACTATAGACAAATTTGA CTTTTTTTTTTCAATTTCTGAAACCAAATGGAACGAGTGAATACCTCCTTCAATGGAATTCCAAT TCTAGCAGTCTTCATAATATAGGCAAGAATACTCTCGATACGTTCTCCTCCGTGCTCATTCTCGA AATTGTTGTATCCCTCGTCGAGATTCATGCCGATAGCTGCATGATTGATAAGCAACTGCTTATGA CGATGACGGCCAAGTTCAATGTTCCATCTGGAAATTCATTTGAAAAAATAATTCGAAAAGAATTA TTTCAAAGCTCTCACCGATTTTCATTGTTCGCCCAGTAGTCACCA Found at i:4835769 original size:12 final size:13 Alignment explanation
Indices: 4835743--4835769 Score: 40 Period size: 12 Copynumber: 2.2 Consensus size: 13 4835733 GGCAGCATCG * 4835743 AAATAATTTTTTA 1 AAATAATTGTTTA 4835756 AAAT-ATTGTTTA 1 AAATAATTGTTTA 4835768 AA 1 AA 4835770 TGATAATCCG Statistics Matches: 13, Mismatches: 1, Indels: 1 0.87 0.07 0.07 Matches are distributed among these distances: 12 9 0.69 13 4 0.31 ACGTcount: A:0.48, C:0.00, G:0.04, T:0.48 Consensus pattern (13 bp): AAATAATTGTTTA Left flanking sequence: Indices 4835243 -- 4835742 ATTTTCATCGACTTTGCCTACTTTTCATAATAGATGTAGGAAGATTCATAGGATGCGTACAGTTT TGATGAATAAAATTGAAATTCTGAAATTTCCAAAAAAAAATGTGCAAAACCGCAATTTGCCGAAA ATTCTCAGCAATTGCCGTTTTTCCGGCAAATTCAGCAATTTGCCGGATTGCCGATTTGCCAGAAA TTTTTTAATTCCGGCAATTTGCCGATTTAAAAATTTCGCATAATCGTAAACCAGATAGCTGTATT AATAAATAGCGATATTAACAAAACCTCTCCTAGTTATCAAATTCACCAGACATTCTAAATATTTA ATTTTCCAGGAAACCATGGATCCTGATGGGACAGCTGATGGATAACGCGAAGGATGCCTATGACA AGGTTGAGAGCAAGTATTTGGATGATCTGGAGAAGGCTGCCAAGAAGAGAAATCAATCGGTTACT CCAAAGAACATCAACTTCCACATTTCCAACTGGCTGGCAGCATCG Right flanking sequence: Indices 4835770 -- 4836269 TGATAATCCGAATTTTTGTTATTTGTTGTTACTGTTAAGTTTTCACTATGAATTTTGTTTTGTGT GTCAAGTAGAGAATCCTCAACATTTATCACAACTAGCTTTACAATTCTCATTCATCCATTTCATT TGTTCCTTCATCTTGCAATAGCCATGCAGAGCCCACGTGCCGCAGTGCACATTCTGATCGTCACA TCCCGGACGGCAGTACATTTTTTTGAGCAACCGGATGTCGCCGCGGGTCAGTTTGGCTCGTTGAC CCAGTTTCGGGGTGTTCTCCTGTGGATTCACCAACGGGATCATCGTCGGCTTGTTGGGGTCCTTG GCGCCGAGATATGCGTTATAGTGCATTATAGAGTCGTAGGCGTACTTGGTACCGTAGGATGTGTA CAGTTTCGCGTCGGATATCGCAAATGTGTCATAGTGTTGGGGGTCGATGTTTGACCAGTCGATCT GGAAATTTTGAAATTTTTTAAAAATCGGCTGGGTCTCGTCGCGAA Found at