TRAP (Tandem Repeats Analysis Program) TRF Version 4.00 Sequence: arm_3R assembled 2004-3-5 md5checksum:6b279651b3b268f11e0dd1d87ded0ccc Parameters: 2 5 7 80 10 25 1000 Pmatch=0.80,Pindel=0.10 tuple sizes 0,4,5,7 tuple distances 0, 29, 159, 1000 Length: 27905053 ACGTcount: A:0.29, C:0.21, G:0.21, T:0.28 Found at i: i:4657358 original size:14 final size:14 Alignment explanation
Indices: 4657336--4657366 Score: 48 Period size: 14 Copynumber: 2.2 Consensus size: 14 4657326 CCGAAAAATG * 4657336 TTTTATTTTCGTTT 1 TTTTATTTTCATTT * 4657350 TTTTTTTTTCATTT 1 TTTTATTTTCATTT 4657364 TTT 1 TTT 4657367 ATATGTGCGT Statistics Matches: 15, Mismatches: 2, Indels: 0 0.88 0.12 0.00 Matches are distributed among these distances: 14 15 1.00 ACGTcount: A:0.06, C:0.06, G:0.03, T:0.84 Consensus pattern (14 bp): TTTTATTTTCATTT Left flanking sequence: Indices 4656836 -- 4657335 ATCAATTTGTTTTTATAAAAATGTCCACCAGAATATGTTTTAATTCGCGGCGGTACATTTCATCA GTTAAATAAGGGAGGTAAAAATATTGAACAAACATGTCTAACTTGCAATTTATTCCTGCAAAACT TTCGCTTACGACACACAAGAAGCGCACATGTAAAATGTATTCATATATTTATATTAAATACTTTG CATATTAACCAAAACTGTAGAATAAACATACCATTTACCAAATATTTCAACTTTATTTTAAAGTA GTTTTTTGTTAGTTATGGTTTTTATTTAGAAATGTTGAATTTACCCAAAACCATAGTTAGATTCA AGATTAACTTTCAAATACCTGAGAAATGTATTGAGAGTTGTTATATTTAAGAAACCAGCTAAAAG CATGATCATATTAAATAGTAATACAAGTTGAAGTTCGAAAGTAGAGAAATGTGGATACGAATCTT TGTACTGTAAACTAAAATAGCAAGTCGAAGTTAACCCGAAAAATG Right flanking sequence: Indices 4657367 -- 4657866 ATATGTGCGTGAAGCGCTCAACTCAACAACCTTAGATTTGGTTTTTACAAACTTTGTTAAGCTTT AATTTATGGTTTGGTTAATAATTTTGGTTATTGCAAAATACAATAATTATTAAATTTATGGAATA TATGCGATCTGTTTTCGTTGTGCGTTTTTCGTGAATTTTGCATCGAATAATTTGTAATGACCATC AACCGCATGAAAGTATGAAGAGATTGGCATAATGATTGATTGATTGATTGACTGATTGTTTCGCT GACTGAATGTTTGATATTGTAAAGTACAAAAATGGCATTTAACAAGAATATAAAACATTTTTCGT TAACACAAATGTTGAAAATTGGGAGTGGGGAATCAATAAGAGTTCTGTATATTTTCGTGTGTTTG ATTTCATTTTTTGTTTTTTACTTTTGGCAAAGGAGGATATCCTTTTGGGAGAGCAATGGGAGAGC AATTCAGGGAGCTACGGGTATCTAATGGACTTATGGACTCACCTC Found at i:4657617 original size:16 final size:16 Alignment explanation
Indices: 4657594--4657641 Score: 54 Period size: 16 Copynumber: 3.0 Consensus size: 16 4657584 ATTGGCATAA * * 4657594 TGATTGATTGATTGAT 1 TGACTGATTGTTTGAT *** 4657610 TGACTGATTGTTTCGC 1 TGACTGATTGTTTGAT * 4657626 TGACTGAATGTTTGAT 1 TGACTGATTGTTTGAT 4657642 ATTGTAAAGT Statistics Matches: 23, Mismatches: 9, Indels: 0 0.72 0.28 0.00 Matches are distributed among these distances: 16 23 1.00 ACGTcount: A:0.21, C:0.08, G:0.25, T:0.46 Consensus pattern (16 bp): TGACTGATTGTTTGAT Left flanking sequence: Indices 4657094 -- 4657593 TAGTTTTTTGTTAGTTATGGTTTTTATTTAGAAATGTTGAATTTACCCAAAACCATAGTTAGATT CAAGATTAACTTTCAAATACCTGAGAAATGTATTGAGAGTTGTTATATTTAAGAAACCAGCTAAA AGCATGATCATATTAAATAGTAATACAAGTTGAAGTTCGAAAGTAGAGAAATGTGGATACGAATC TTTGTACTGTAAACTAAAATAGCAAGTCGAAGTTAACCCGAAAAATGTTTTATTTTCGTTTTTTT TTTTTCATTTTTTATATGTGCGTGAAGCGCTCAACTCAACAACCTTAGATTTGGTTTTTACAAAC TTTGTTAAGCTTTAATTTATGGTTTGGTTAATAATTTTGGTTATTGCAAAATACAATAATTATTA AATTTATGGAATATATGCGATCTGTTTTCGTTGTGCGTTTTTCGTGAATTTTGCATCGAATAATT TGTAATGACCATCAACCGCATGAAAGTATGAAGAGATTGGCATAA Right flanking sequence: Indices 4657642 -- 4658141 ATTGTAAAGTACAAAAATGGCATTTAACAAGAATATAAAACATTTTTCGTTAACACAAATGTTGA AAATTGGGAGTGGGGAATCAATAAGAGTTCTGTATATTTTCGTGTGTTTGATTTCATTTTTTGTT TTTTACTTTTGGCAAAGGAGGATATCCTTTTGGGAGAGCAATGGGAGAGCAATTCAGGGAGCTAC GGGTATCTAATGGACTTATGGACTCACCTCATGTTGTGATGGTGCCCGGCGGTAGCTCCGATTTG CGGTTTACGATACAGTTCGAAGGCCGAACCGCGCTGCTCCCGACTTCCGGCCAAGTCAAGAGCAT GACGTTCGGGCGTGTGAGGCGGCAGGTTTCCTATGGTTAACATTTAAGTAGGTATTAGGATATTC TATGCTCAGAAGATATAACCCCTTAAGATAGGGCTAACACGCACCTATTGGCGGTGGCATGCCGC GATGTGGTGCAATATAGGGTCCTGTGCCGCTGCCCCCGTTGTAGT Found at i:4657628 original size:12 final size:12 Alignment explanation
Indices: 4657594--4657632 Score: 36 Period size: 12 Copynumber: 3.2 Consensus size: 12 4657584 ATTGGCATAA * * 4657594 TGATTGATTGAT 1 TGATTCACTGAT * 4657606 TGATTGACTGAT 1 TGATTCACTGAT * * * 4657618 TGTTTCGCTGAC 1 TGATTCACTGAT 4657630 TGA 1 TGA 4657633 ATGTTTGATA Statistics Matches: 21, Mismatches: 6, Indels: 0 0.78 0.22 0.00 Matches are distributed among these distances: 12 21 1.00 ACGTcount: A:0.21, C:0.10, G:0.26, T:0.44 Consensus pattern (12 bp): TGATTCACTGAT Left flanking sequence: Indices 4657094 -- 4657593 TAGTTTTTTGTTAGTTATGGTTTTTATTTAGAAATGTTGAATTTACCCAAAACCATAGTTAGATT CAAGATTAACTTTCAAATACCTGAGAAATGTATTGAGAGTTGTTATATTTAAGAAACCAGCTAAA AGCATGATCATATTAAATAGTAATACAAGTTGAAGTTCGAAAGTAGAGAAATGTGGATACGAATC TTTGTACTGTAAACTAAAATAGCAAGTCGAAGTTAACCCGAAAAATGTTTTATTTTCGTTTTTTT TTTTTCATTTTTTATATGTGCGTGAAGCGCTCAACTCAACAACCTTAGATTTGGTTTTTACAAAC TTTGTTAAGCTTTAATTTATGGTTTGGTTAATAATTTTGGTTATTGCAAAATACAATAATTATTA AATTTATGGAATATATGCGATCTGTTTTCGTTGTGCGTTTTTCGTGAATTTTGCATCGAATAATT TGTAATGACCATCAACCGCATGAAAGTATGAAGAGATTGGCATAA Right flanking sequence: Indices 4657633 -- 4658132 ATGTTTGATATTGTAAAGTACAAAAATGGCATTTAACAAGAATATAAAACATTTTTCGTTAACAC AAATGTTGAAAATTGGGAGTGGGGAATCAATAAGAGTTCTGTATATTTTCGTGTGTTTGATTTCA TTTTTTGTTTTTTACTTTTGGCAAAGGAGGATATCCTTTTGGGAGAGCAATGGGAGAGCAATTCA GGGAGCTACGGGTATCTAATGGACTTATGGACTCACCTCATGTTGTGATGGTGCCCGGCGGTAGC TCCGATTTGCGGTTTACGATACAGTTCGAAGGCCGAACCGCGCTGCTCCCGACTTCCGGCCAAGT CAAGAGCATGACGTTCGGGCGTGTGAGGCGGCAGGTTTCCTATGGTTAACATTTAAGTAGGTATT AGGATATTCTATGCTCAGAAGATATAACCCCTTAAGATAGGGCTAACACGCACCTATTGGCGGTG GCATGCCGCGATGTGGTGCAATATAGGGTCCTGTGCCGCTGCCCC Found at i:4657818 original size:11 final size:11 Alignment explanation
Indices: 4657802--4657824 Score: 46 Period size: 11 Copynumber: 2.1 Consensus size: 11 4657792 GATATCCTTT 4657802 TGGGAGAGCAA 1 TGGGAGAGCAA 4657813 TGGGAGAGCAA 1 TGGGAGAGCAA 4657824 T 1 T 4657825 TCAGGGAGCT Statistics Matches: 12, Mismatches: 0, Indels: 0 1.00 0.00 0.00 Matches are distributed among these distances: 11 12 1.00 ACGTcount: A:0.35, C:0.09, G:0.43, T:0.13 Consensus pattern (11 bp): TGGGAGAGCAA Left flanking sequence: Indices 4657302 -- 4657801 CTAAAATAGCAAGTCGAAGTTAACCCGAAAAATGTTTTATTTTCGTTTTTTTTTTTTCATTTTTT ATATGTGCGTGAAGCGCTCAACTCAACAACCTTAGATTTGGTTTTTACAAACTTTGTTAAGCTTT AATTTATGGTTTGGTTAATAATTTTGGTTATTGCAAAATACAATAATTATTAAATTTATGGAATA TATGCGATCTGTTTTCGTTGTGCGTTTTTCGTGAATTTTGCATCGAATAATTTGTAATGACCATC AACCGCATGAAAGTATGAAGAGATTGGCATAATGATTGATTGATTGATTGACTGATTGTTTCGCT GACTGAATGTTTGATATTGTAAAGTACAAAAATGGCATTTAACAAGAATATAAAACATTTTTCGT TAACACAAATGTTGAAAATTGGGAGTGGGGAATCAATAAGAGTTCTGTATATTTTCGTGTGTTTG ATTTCATTTTTTGTTTTTTACTTTTGGCAAAGGAGGATATCCTTT Right flanking sequence: Indices 4657825 -- 4658324 TCAGGGAGCTACGGGTATCTAATGGACTTATGGACTCACCTCATGTTGTGATGGTGCCCGGCGGT AGCTCCGATTTGCGGTTTACGATACAGTTCGAAGGCCGAACCGCGCTGCTCCCGACTTCCGGCCA AGTCAAGAGCATGACGTTCGGGCGTGTGAGGCGGCAGGTTTCCTATGGTTAACATTTAAGTAGGT ATTAGGATATTCTATGCTCAGAAGATATAACCCCTTAAGATAGGGCTAACACGCACCTATTGGCG GTGGCATGCCGCGATGTGGTGCAATATAGGGTCCTGTGCCGCTGCCCCCGTTGTAGTGATGCCCA TTCCCATTGTAGCCATTGGCCTGCGGATAGGATTGTGGTGGTGGTGCCTGGCCATAGTTGCCATT ACTTCCGCCGTAGGTGGGCTGCTGCTGCTGCGGTGGTGGTGGCTGCATGTGGCCATTGCTGGGTG AACCCGGGGTCGCCTGCTGGCCGTAATGATGATGCGAAGGCGTTG Found at i:4660985 original size:21 final size:21 Alignment explanation
Indices: 4660941--4660985 Score: 55 Period size: 21 Copynumber: 2.1 Consensus size: 21 4660931 TAGTTTGAGT * * * * 4660941 TTTTTTTGTTTTGTATGTTTG 1 TTTGTTTGTTTGGTAGGTTGG * 4660962 TTTGTTTGTTTGGTTGGTTGG 1 TTTGTTTGTTTGGTAGGTTGG 4660983 TTT 1 TTT 4660986 TTCGACCTCT Statistics Matches: 19, Mismatches: 5, Indels: 0 0.79 0.21 0.00 Matches are distributed among these distances: 21 19 1.00 ACGTcount: A:0.02, C:0.00, G:0.27, T:0.71 Consensus pattern (21 bp): TTTGTTTGTTTGGTAGGTTGG Left flanking sequence: Indices 4660441 -- 4660940 GCCCGAGGTGTTCAGTGGTATATCGCCCGGCTTGGACTGACGATCGATGCGGGGCGGCAGATCGG GAGCATTAATCCCGTACAGAGATTGCGGTCTCACTGCAGCCGTATCTCCTCCAACGCCGGGCTGC TGCTGCTGTGGTGGCACATTGGTGCCGTAGATGCTGTACTTGCTGGAGTCCATGGTCTGGCGGCG ATTGGGATTCGCGGGGACAGCATGGTCGTAGGGTACCTGCAGCAGGTGCATTGCAAGGGGTTCGT GAGTGGGTGGTGAATTAGATTAGCACACTAGTCAGCAAAAATAAACTTTCATGAGAGCTATTATG GAAAATATTGATTTTAGAATGTCTCTTTTGAATTTCACGTAATATTTTCTTTATTTTTGTTGACC ATTGTTATTTTGATGAGAACTGGATGGACGCTTAGAAATTTCCCAAGTTTTTGGTTGTTTTTTCT TTTGATTGATTTTAGTGTAAGCGCATGCCATTTCTTAGTTTGAGT Right flanking sequence: Indices 4660986 -- 4661485 TTCGACCTCTTACCGTATATGGAGGTGGTAGTCCTTCACCAATTATGTCTCTATCCCTATCCAAG TTATCCTGATTAGTGGCAATCGATGGATCTGAGCTCGCTTTAACCAACTGCGGCAAATTGCCAAG CGACAATGATGCGGATGGGCCGGGACTCAGTTCCAAATCGGATTCGGGACTTGATGCATACGAGA GTCGGGATGTGGTCATGGGGAATAGGAAATCGTCGGAGAGGGATTCTACTGGCTGGGGTTTGGTA GTTTGCAGGATTGAGCGCAATTGTTTGGCAAAAGTTAATTGATTTTTAGCGATAGTTTTTTTTTT GGTTTTTTGTTTGGTTTTCGAATGTTCAAAATTTAGCGCGTTGTGAGCGAACAACATTTTTTTTT TGCAATTGTTGTCAATTTAAACGCAAGAACAGCAACAAGAAACGTTTATGAAACATTGAAAGAGA TATGATTGATTCGATACGATTCGGTTGATTGAAAGGCGTTCGATT Found at i:4661318 original size:11 final size:12 Alignment explanation
Indices: 4661300--4661328 Score: 51 Period size: 12 Copynumber: 2.4 Consensus size: 12 4661290 TTTAGCGATA * 4661300 GTTTTTTTTTTG 1 GTTTTTTGTTTG 4661312 GTTTTTTGTTTG 1 GTTTTTTGTTTG 4661324 GTTTT 1 GTTTT 4661329 CGAATGTTCA Statistics Matches: 16, Mismatches: 1, Indels: 0 0.94 0.06 0.00 Matches are distributed among these distances: 12 16 1.00 ACGTcount: A:0.00, C:0.00, G:0.21, T:0.79 Consensus pattern (12 bp): GTTTTTTGTTTG Left flanking sequence: Indices 4660800 -- 4661299 TCACGTAATATTTTCTTTATTTTTGTTGACCATTGTTATTTTGATGAGAACTGGATGGACGCTTA GAAATTTCCCAAGTTTTTGGTTGTTTTTTCTTTTGATTGATTTTAGTGTAAGCGCATGCCATTTC TTAGTTTGAGTTTTTTTTGTTTTGTATGTTTGTTTGTTTGTTTGGTTGGTTGGTTTTTCGACCTC TTACCGTATATGGAGGTGGTAGTCCTTCACCAATTATGTCTCTATCCCTATCCAAGTTATCCTGA TTAGTGGCAATCGATGGATCTGAGCTCGCTTTAACCAACTGCGGCAAATTGCCAAGCGACAATGA TGCGGATGGGCCGGGACTCAGTTCCAAATCGGATTCGGGACTTGATGCATACGAGAGTCGGGATG TGGTCATGGGGAATAGGAAATCGTCGGAGAGGGATTCTACTGGCTGGGGTTTGGTAGTTTGCAGG ATTGAGCGCAATTGTTTGGCAAAAGTTAATTGATTTTTAGCGATA Right flanking sequence: Indices 4661329 -- 4661828 CGAATGTTCAAAATTTAGCGCGTTGTGAGCGAACAACATTTTTTTTTTGCAATTGTTGTCAATTT AAACGCAAGAACAGCAACAAGAAACGTTTATGAAACATTGAAAGAGATATGATTGATTCGATACG ATTCGGTTGATTGAAAGGCGTTCGATTGCGAAGCATTTGGATACGTAATGTGTGGACGAACACAA GATATTTGGCATTTTGAGTATATTATGTTGTTTGGTTTTTGTTTTTAGTTTTGGACAAGGACATT TTGATTATTTTTGTGGTGTTTGGTTTGTTTGATTATATGCATCGGGTTTTACGGGTGATTAAGCG GGGAATGACCATGATGATATATATTTGGTTTTGGTATGTAAATAAAAGAAACAAATGAAACGAAA AACATTTAGTTAGCAACTTTATAAAAATATTGGCAAAAATTTTTATGGCGATTTTTGCGTAAATA CTTAAGCCTAAATATGTATGTCAAATTGGTTCGATAGAATTGGTA Found at i:4662265 original size:13 final size:13 Alignment explanation
Indices: 4662247--4662272 Score: 45 Period size: 13 Copynumber: 2.0 Consensus size: 13 4662237 CAAGATCGGA 4662247 ATAAATCAGATCT 1 ATAAATCAGATCT * 4662260 ATAAATTAGATCT 1 ATAAATCAGATCT 4662273 CGTTTTCTGG Statistics Matches: 12, Mismatches: 1, Indels: 0 0.92 0.08 0.00 Matches are distributed among these distances: 13 12 1.00 ACGTcount: A:0.46, C:0.12, G:0.08, T:0.35 Consensus pattern (13 bp): ATAAATCAGATCT Left flanking sequence: Indices 4661747 -- 4662246 ATTGGCAAAAATTTTTATGGCGATTTTTGCGTAAATACTTAAGCCTAAATATGTATGTCAAATTG GTTCGATAGAATTGGTAATGAGTACGTTTGGAGTTGGAAAACTGTCATTCGTTGGGAGTACAAAG TGGAAATGTGAGAAGATAAAAGTACTCAAATTCGTATAAATGCAGATCTTAGATCTCTTGAGATT AAATATTGTACTTTAAGCATTCCCTGGAATGACAATTTTCGTGCTGTTGGAGGATTATGTGGTAG TTGTGATCCCTCTACATGCTTTTAGCTTCACGATTACACACATTTATATGTACATACATATTCAA CGAATAGCGGGCTACACGCAATATTATTGTTCTTGATCATGCTACATGTGAAGATTTGGGTCTTA TGAATAATTTAGTACAAACAACTACATGCGATAATTACACAAAGAAGGGGCTGATAGGAAGGATA GAGGAGATACGATTCAGTTGAAAAGTCTTGTGGCCCAAGATCGGA Right flanking sequence: Indices 4662273 -- 4662772 CGTTTTCTGGACCTTTTCAACTAAATTAACACCGATTCTCATGCAATGCATTCGTTACTTTGGCC AACATTGTTGTTGGAATCAGCATTATTAACATGGCTATTGTTGTTGTTGGCATTAATATTATGGC TGTTGCTGTTGTTGTTGATGCTCCTGCTGGTGCTACAATTATTATTGTTTAGACTACTTGAATTA TTGAGACTGGCTATTTGATTGGTGAGATTATTGAAGGCCAGTGTAAAGCTGCCCTCATCCACCAA AGTGCCATCGCTGCTCTCGTGACCATTGCTCAGCCCATGGCCATTGCCCAGAAGATTGCTCAGTG ACCCCGAGGAGGAGTAGTTGCTCCTGCCCTGACCATTGCTAATCAAACGCTGCTGTGGCTTGGCC ATCGGTGCCCTTTTGGATGCATTCGATGCATCTGCAAGATGCTTCTGATGCTGCTGCTGCTGCTG TTGTTGCTGCTCCAGCTGCACATTGCTGTTCTTGCTCTTGGCCAG Found at i:4662391 original size:30 final size:30 Alignment explanation
Indices: 4662357--4662416 Score: 85 Period size: 30 Copynumber: 2.0 Consensus size: 30 4662347 GTTGGAATCA * * 4662357 GCATTATTAACATGGCTATTGTTGTTGTTG 1 GCATTAATAACATGGCTATTGCTGTTGTTG ** * 4662387 GCATTAATATTATGGCTGTTGCTGTTGTTG 1 GCATTAATAACATGGCTATTGCTGTTGTTG 4662417 TTGATGCTCC Statistics Matches: 25, Mismatches: 5, Indels: 0 0.83 0.17 0.00 Matches are distributed among these distances: 30 25 1.00 ACGTcount: A:0.18, C:0.10, G:0.25, T:0.47 Consensus pattern (30 bp): GCATTAATAACATGGCTATTGCTGTTGTTG Left flanking sequence: Indices 4661857 -- 4662356 CATTCGTTGGGAGTACAAAGTGGAAATGTGAGAAGATAAAAGTACTCAAATTCGTATAAATGCAG ATCTTAGATCTCTTGAGATTAAATATTGTACTTTAAGCATTCCCTGGAATGACAATTTTCGTGCT GTTGGAGGATTATGTGGTAGTTGTGATCCCTCTACATGCTTTTAGCTTCACGATTACACACATTT ATATGTACATACATATTCAACGAATAGCGGGCTACACGCAATATTATTGTTCTTGATCATGCTAC ATGTGAAGATTTGGGTCTTATGAATAATTTAGTACAAACAACTACATGCGATAATTACACAAAGA AGGGGCTGATAGGAAGGATAGAGGAGATACGATTCAGTTGAAAAGTCTTGTGGCCCAAGATCGGA ATAAATCAGATCTATAAATTAGATCTCGTTTTCTGGACCTTTTCAACTAAATTAACACCGATTCT CATGCAATGCATTCGTTACTTTGGCCAACATTGTTGTTGGAATCA Right flanking sequence: Indices 4662417 -- 4662916 TTGATGCTCCTGCTGGTGCTACAATTATTATTGTTTAGACTACTTGAATTATTGAGACTGGCTAT TTGATTGGTGAGATTATTGAAGGCCAGTGTAAAGCTGCCCTCATCCACCAAAGTGCCATCGCTGC TCTCGTGACCATTGCTCAGCCCATGGCCATTGCCCAGAAGATTGCTCAGTGACCCCGAGGAGGAG TAGTTGCTCCTGCCCTGACCATTGCTAATCAAACGCTGCTGTGGCTTGGCCATCGGTGCCCTTTT GGATGCATTCGATGCATCTGCAAGATGCTTCTGATGCTGCTGCTGCTGCTGTTGTTGCTGCTCCA GCTGCACATTGCTGTTCTTGCTCTTGGCCAGATCCGGCTGATGCTGCTGCTGCTGCTGGGGCAGA AGATTCAGACTGGAATCGAAGAGATTCTTCTGCAGCAGCAGCTCGTGGTAGTAGTAGGGAGTGGT CCTACGTTCCACCTGGGCATTGGACCGCAATCCATAGCGGCTGAC Found at i:4668959 original size:12 final size:12 Alignment explanation
Indices: 4668938--4668961 Score: 41 Period size: 12 Copynumber: 2.0 Consensus size: 12 4668928 GTGGTTAGTT 4668938 GTAAAAATAATG 1 GTAAAAATAATG * 4668950 GTACAAATAATG 1 GTAAAAATAATG 4668962 AAGGAAATAT Statistics Matches: 11, Mismatches: 1, Indels: 0 0.92 0.08 0.00 Matches are distributed among these distances: 12 11 1.00 ACGTcount: A:0.54, C:0.04, G:0.17, T:0.25 Consensus pattern (12 bp): GTAAAAATAATG Left flanking sequence: Indices 4668438 -- 4668937 CTATCGAGGGATCGCCGTTGGCGAAGTGCGGATTATCACGTCCACCGGAAACGGCGATGCCGAAT CCATAGCCCGGCACCCGAGTCACCGCCACCGTGTGGTACTCCCATGTGGTTCGATCACCCTGGAA AATCGAGAACAAATATTGAATTCGTTAGATGATTTTAAATTTTAAAGAAAAAGTACACATAAAAC TAAACAAAAAGCGAAATAAATGATTTAAAAATTGTAGTAAAACTTGTTGTGTAAAATCTTTTCTC TTTGCTGCCATTACCAATTTATTTCAATATAGTTTAATTGGAATTGAAATTTGTTAAGGACGGCT GCCAGGCGGAAATGCACATGTGACTTCCGCATTTCCATTACTTTTACACACTCTTGTATGCGACC TGTTGCCCAGGCCCTTTGAAAGACCCATGAATGTTTAGCCACTCGGACACGATTCAATTTTATGC ACTAGAGGTTCCAGCAGAAGTGCGTAAACGGGGTAGTGGTTAGTT Right flanking sequence: Indices 4668962 -- 4669461 AAGGAAATATGACTTGTTGGGTGTGCACTCGCTGTGACTGAATGGGTATTTGTGGAGTTTACTAT GCATTTGTTGTTTTTTTTTTTTGACTGAGACACCTGACACAAAAGCGGAACTAAATAAAACTGAA AACGATTCTATTTGGAAATGCCACGAATGAAGTTGAATTTACATACATAAAGTCAGCAAAGATAA AAATATTTCTGGGCCGTACATACATATATCATTTTGTGTAGGACAAAAGAATTGGGGAATGAAAG ATGTTTGGGATGAACTAGAAATGTGAGATATAAACATATAAATGTACTTTTTAATGGCTCGGGTA AAAACTTAATTTCTCTTCTCAAGTTTTCTTTTTTAATTATGAATAATGGATACAAAGAATTTTTA TATGACTGCATTTATAATTCTATTTAAAGTGTAATGCTGGGAAAAGCAAATACACTGCGTTCGGC ATTCAACAACTCAACTAAATTAATGATTTCAATCGGCTGGCACGC Found at i:4670398 original size:16 final size:17 Alignment explanation
Indices: 4670377--4670416 Score: 59 Period size: 17 Copynumber: 2.4 Consensus size: 17 4670367 GTGCGTTGCC * 4670377 AAGTTTTCTT-CCAACG 1 AAGTTTTCTTGCCAAAG * 4670393 AAGTTTTGTTGCCAAAG 1 AAGTTTTCTTGCCAAAG 4670410 AAGTTTT 1 AAGTTTT 4670417 TTCGATTCTA Statistics Matches: 21, Mismatches: 2, Indels: 1 0.88 0.08 0.04 Matches are distributed among these distances: 16 9 0.43 17 12 0.57 ACGTcount: A:0.28, C:0.15, G:0.17, T:0.40 Consensus pattern (17 bp): AAGTTTTCTTGCCAAAG Left flanking sequence: Indices 4669877 -- 4670376 AAAGACAGACGCAACACAACGCATCCAATTACAAAAACTCGGAGTAACATTCCACGCGTGGGCTT GTATAAATAATAAACGAAATTAACTAACAAAAATACAAATTTGTGTAGTCGCGTGGGCCAAGCTA AAGCTAATAAATATTTATAAAGTTATACGTCTGCTGCAGGTGTAGCTATGTATTTTTCAACAAAT ATACGGATTTGCATCGGACTGACTGCACATCCACATCTGCTCAGAAATCTTTGGTTATGCTTGGC TTGCATAAAACAAAAATAAAACCAAGGGAGCCGAAAACATGAAAGAAGATATATGAATACGTTTG CTGGATTTTTGACCGACTTTGTGCATTTTGATGGGGGCGGTAAAATTATAATTAACTTAATTGCA AGTGAAATTAGTTGAAAATTTAATGGTGTGCAGCAGAAGTAAGGCGTGCGTTAAAGACTTTCTTT ATCCTGAATATGGCCCATAATTAATCTTGTCGTGTGTGCGTTGCC Right flanking sequence: Indices 4670417 -- 4670916 TTCGATTCTATGTAGTAGTAACCACCGTAACCTTCATCTGCTACAGCGCAGGCATTCATCAGATT GTTTATCTGGCCGGTTCTAAGACCCCACCCTTCTCTTTAGTCATAATTTAAGTAGCGACCTAATG ATTTATGGCCCAGTTACACACACTCTTAATCACTTTAATTATAGGGAAAAACACTAAGAAACTAA GATGTTTGCCCCTGGTTTTTGCTTACCACCAACATGTTGTTTGGAACATAATCCGGAAACTTCAT CGTGTTTGCTTTTATTTGGTTTCGTTTCGCCGCAAATTGAAATGTATCTCAAACAATGCACTTTG AGCGAATCAAAGCAATTAATTTGACAATTTAATTGGATTCATATGACATGTTTATAGGGAGTGTG TAATCTCACTTGTTTGCATTGCGATATGAATGAATGCACGTAATTTGGTCACTTGAAGCACGCAC ACTAACACCGAAAATAAATATAATTTTTTACAAATGGGAATAATA Found at i:4673889 original size:11 final size:11 Alignment explanation
Indices: 4673867--4673889 Score: 32 Period size: 11 Copynumber: 2.1 Consensus size: 11 4673857 TTATCAACGA * 4673867 TTTAATGAATT 1 TTTAATCAATT * 4673878 TTTAATCTATT 1 TTTAATCAATT 4673889 T 1 T 4673890 CTATTTCTTC Statistics Matches: 10, Mismatches: 2, Indels: 0 0.83 0.17 0.00 Matches are distributed among these distances: 11 10 1.00 ACGTcount: A:0.30, C:0.04, G:0.04, T:0.61 Consensus pattern (11 bp): TTTAATCAATT Left flanking sequence: Indices 4673367 -- 4673866 CAAAATTAAAAGCAAATCAACAAGGCACTACGATTTCCATTTGCACACTCCACATCAGCATAGTT TTTCCCCCTCAGTCCGCTGTCGTCCGTTCGCAAAAAAAAAAAAGAAAAAAAATGTAAACGATTCT GACGCCATTGCCAATACCACGGAAAGCTGCCAAACAATAGAGCTCCAGTCTGGAATTCCTTATAA AGTAGAATTTCTTGTCGCCGCGTGAACTTGGTGCCAAAATAGTTTGGGAAAAAGACAAAAGCCAG TCGCCACCGAAAAGCCAACTAAAACAAAGGCAAATAATTGTTGGGCAACGGCGATATTGAATTGC TTAGTTTGGGTCAAAACAATGATATACCATTGCAGATAAATAAATCATGGAGGAATGCCCCAGGT CAGATCCCATCTAAATGATCCGCTTTAGATTTCTTCAACACCTACTGAGATTCGAAAGAAAAGGG ACTAAGCCCATTTTATTTCTTCGCTCTCACGCAATTTATCAACGA Right flanking sequence: Indices 4673890 -- 4674389 CTATTTCTTCTTCTCTATTGACCGTATTGTACAGTCTGTATCTTCGTACCCAGTGAGATCGGTCA GGTAGGAATCTAAAGTATTCCTAGGGGCATTTCAGTTACCTAGGAGGCTGAAAACATGTCGGGAC ACGACCTTTGTGGATGGTATTCTGATTCCTGCCACACATTCCACTCAAACAAAAAACACAGAAAA GTGGTGGCTGCTCTTTGGTGTGCTCTTTGTGTACCTCAATTGATAAACAATTGACTCTTGTGCAT CGCACATACACACATACATACAGGCACAAAAATGCAATCAGCCATGACAATTTTAATTTAAGTAC TCCCCTCATCCCCTTCACCATCTCACTATTTATTCTGGGGTTCTTTTTTTTTTTTCCTCGGCTCG CGTTTTTGCCTACTTCTTTTAGAAGCTGCACTTTATTTGTCGAAGAGGCACGAATCCGAGTAAAT AAGTTTGCAAGCAAAGGATTTTTATCGAGTTTTGTTCTTGTTTAA Found at i:4674644 original size:11 final size:11 Alignment explanation
Indices: 4674626--4674661 Score: 37 Period size: 11 Copynumber: 3.5 Consensus size: 11 4674616 TGATTCATTT * 4674626 TATGTTTTTTA 1 TATTTTTTTTA 4674637 TA--TTTTTTA 1 TATTTTTTTTA * 4674646 TATTCTTTTTA 1 TATTTTTTTTA * 4674657 TTTTT 1 TATTT 4674662 ATATTTTGAA Statistics Matches: 20, Mismatches: 3, Indels: 4 0.74 0.11 0.15 Matches are distributed among these distances: 9 9 0.45 11 11 0.55 ACGTcount: A:0.17, C:0.03, G:0.03, T:0.78 Consensus pattern (11 bp): TATTTTTTTTA Left flanking sequence: Indices 4674126 -- 4674625 GATAAACAATTGACTCTTGTGCATCGCACATACACACATACATACAGGCACAAAAATGCAATCAG CCATGACAATTTTAATTTAAGTACTCCCCTCATCCCCTTCACCATCTCACTATTTATTCTGGGGT TCTTTTTTTTTTTTCCTCGGCTCGCGTTTTTGCCTACTTCTTTTAGAAGCTGCACTTTATTTGTC GAAGAGGCACGAATCCGAGTAAATAAGTTTGCAAGCAAAGGATTTTTATCGAGTTTTGTTCTTGT TTAATGATACAGCAGTCTGTTTGTGATTTTAGTTGGCCTGTTTGCAGTAGGGTGGCTCAGCAGAT GTTGAAGTTTTGTTTTGTTTTTTCATTGAATGAAAGTATATACACACATGTTGTAGAAATTACTA AGAATTTTAGCAATTTACATATTTGTAGATTATCGAAGATCTCTTAGTCGTCGAATGAGTTCACA AAAGGAAGGTCGCTTGTATTATGGATTATTATTTGTGATTCATTT Right flanking sequence: Indices 4674662 -- 4675161 ATATTTTGAAAGGTTATTTACATGCAAACACTTTTTCAAAACATTTTCAATTCGACCATAATTCA CCATGTTGCCAAATTGACAATGCATGTGGTGAGGCAGATGTGACTCTTCCCGGCAACTGATTCGC ATGCATGTCAGAGGTCCTGGGACGTGTTCCCGTGCCCAAGTTGGCCACTTGTCTGCTGGGTGTTA AGCGACATCAAACTGTGCTTTTACCCCTTCGGCGCCTCTGTGGTGGCAAAAGGAAGCGGACTGTG GCATCATTGGAGGACACCACAGGCGTATCCACAACAACGACAACTGGTCGAGGTCGCGTTATCCT GGCGGCCACGTAGATGACATACGACTTGTCTGCGGCGATTACCGAAACGGAAGGACGATGGCCTG GTGGTAATGGCAATGTGACAAGGTGGGTGGCAGGATAATGGGGACAGTGGGGCTGCAGCAGGTGG AACGGTCGGAGCAGCCCACCCACTTGACATGTCGAGGCCATTTTG Found at i:4679755 original size:12 final size:11 Alignment explanation
Indices: 4679730--4679759 Score: 39 Period size: 11 Copynumber: 2.7 Consensus size: 11 4679720 AATAAGATCG * 4679730 TTTTGCGTAAA 1 TTTTGTGTAAA * 4679741 TTTTGTGTGAA 1 TTTTGTGTAAA * 4679752 ATTTGTGT 1 TTTTGTGT 4679760 TTTGTATGGC Statistics Matches: 16, Mismatches: 3, Indels: 0 0.84 0.16 0.00 Matches are distributed among these distances: 11 16 1.00 ACGTcount: A:0.20, C:0.03, G:0.23, T:0.53 Consensus pattern (11 bp): TTTTGTGTAAA Left flanking sequence: Indices 4679230 -- 4679729 GTGTCTTTGCTTTAGAACAGGTTTTTTCCTTATTAATATGATTCAATCGACAAGAATTTGAGACT GGGTGCGGTGTGTGTGCGGTTTGGGGCAGCGTGTCAAGTGAAGTTGTATATATTTACCAACTGCA AAGACACACAACTACAAATTGTGACCATTCATTTCCCAATCAATGCCGCTACTACCTCAAAGCTC AGTGTTTGTTTCGTAAGGGGCCAAAACAAAACAAGAAAAAAACTAAACAAGTCTTGGCCACCACA GAATGCGGCTCTCAACGCATTTTACATGTTTTATTGTGCATTTTTTCGAGTTTTTAAAACTATGC AACTCTTTGCTGAATGAACCACACATACACATATCTTGGCCCAATGGGGTTTTGTTTGGTATTTT GCACCAGTTGCAGTCTGAAATCCAGTTTTATGTGCTGCATCTAGATTGTCGCTTTTGATTTCGGA TTTCCATTTCAAAATGCTAATAAATCTTTCCTCTTAATAAGATCG Right flanking sequence: Indices 4679760 -- 4680259 TTTGTATGGCTCTGAGAAATGGAGCAGGTGGAACGAGTTAAGAATTCGAAGGCGAAATATATATA TATATATATTTATATTACGTTCAATGTCAATGGTTAGTGACTGAGCTTAATAAATGAGTGGCTAA TATCTTAATTAGAGGCCATCGTGACGAAAAGAAAACCCACACCCCTGCCAAAAATCCTTTTGTTT TCAATCAAATTTTCCCATGAAACCCATGACGCCCCACCCGCCCATAGAAAATCAAGGTAATTACA AAGAAATGACTCCATCAAAGTGCAGCCAACAAAAAAAAAAATAGAGTTAATTTGAAGCTCACGTG ACTAACACAAGACAGAAGCTAAATTAACAATTTTACAGCTGCAGTCGGCGGGCGGGAAAAGTGGA AAAGGGGGACTTTCCCCGATTGAAGGCCCAAACAATTATGCGCCCCAACATGGCAACCGACTGGT CGGAGATACATAGATACATGGATACAGATACAAATGGATACGGAT Found at i:4680240 original size:16 final size:16 Alignment explanation
Indices: 4680219--4680255 Score: 46 Period size: 16 Copynumber: 2.3 Consensus size: 16 4680209 ACTGGTCGGA * * * 4680219 GATACATAGATACATG 1 GATACAGAGACAAATG * 4680235 GATACAGATACAAATG 1 GATACAGAGACAAATG 4680251 GATAC 1 GATAC 4680256 GGATATCCAA Statistics Matches: 17, Mismatches: 4, Indels: 0 0.81 0.19 0.00 Matches are distributed among these distances: 16 17 1.00 ACGTcount: A:0.46, C:0.14, G:0.19, T:0.22 Consensus pattern (16 bp): GATACAGAGACAAATG Left flanking sequence: Indices 4679719 -- 4680218 TAATAAGATCGTTTTGCGTAAATTTTGTGTGAAATTTGTGTTTTGTATGGCTCTGAGAAATGGAG CAGGTGGAACGAGTTAAGAATTCGAAGGCGAAATATATATATATATATATTTATATTACGTTCAA TGTCAATGGTTAGTGACTGAGCTTAATAAATGAGTGGCTAATATCTTAATTAGAGGCCATCGTGA CGAAAAGAAAACCCACACCCCTGCCAAAAATCCTTTTGTTTTCAATCAAATTTTCCCATGAAACC CATGACGCCCCACCCGCCCATAGAAAATCAAGGTAATTACAAAGAAATGACTCCATCAAAGTGCA GCCAACAAAAAAAAAAATAGAGTTAATTTGAAGCTCACGTGACTAACACAAGACAGAAGCTAAAT TAACAATTTTACAGCTGCAGTCGGCGGGCGGGAAAAGTGGAAAAGGGGGACTTTCCCCGATTGAA GGCCCAAACAATTATGCGCCCCAACATGGCAACCGACTGGTCGGA Right flanking sequence: Indices 4680256 -- 4680755 GGATATCCAATAATTGCCAGCTCAACATGGGAAGGGCCCGTGGCCCCAGCAAAGCCTTGTGTGTG TATAAAAATCACTCAATTGCCCCCGACGGATCAATTCAATGCAGTTCATGGCCTCGTGACTAGAT AACTTTCCAAAGTTCGACTGACTGGCAGCTGCAACATAATGGCGTTAAATTACCAATATAAATCA ATGGGTTAAACATAACGAAAACCAACACCCGCATCGCTCGATCAACAAGAATACAAATGAAAAAA AAAAGATATAATATTAGGGAGCGGTTTTCTGGTGGGGGGGATCGAAATCTCAAAGTCTCCAAAGG GCACCGGCTATCGTTTACTTAGCCATCAGAAACCAGTTGAACAACTTGACTTGGATGCTGGCCAA AGACTTTTTCTTTCTTTTGAAGCGAGTTTATTTTTATCTGAGTGGAATTACATAGATATGTATGT ACATGTACATATACAACTATACGACCCGGCTCACTCAATCCTTGG Found at i:4680245 original size:14 final size:15 Alignment explanation
Indices: 4680226--4680260 Score: 47 Period size: 16 Copynumber: 2.3 Consensus size: 15 4680216 GGAGATACAT 4680226 AGATAC-ATGGATAC 1 AGATACAATGGATAC 4680240 AGATACAAATGGATAC 1 AGATAC-AATGGATAC * 4680256 GGATA 1 AGATA 4680261 TCCAATAATT Statistics Matches: 18, Mismatches: 1, Indels: 2 0.86 0.05 0.10 Matches are distributed among these distances: 14 6 0.33 16 12 0.67 ACGTcount: A:0.46, C:0.11, G:0.23, T:0.20 Consensus pattern (15 bp): AGATACAATGGATAC Left flanking sequence: Indices 4679726 -- 4680225 ATCGTTTTGCGTAAATTTTGTGTGAAATTTGTGTTTTGTATGGCTCTGAGAAATGGAGCAGGTGG AACGAGTTAAGAATTCGAAGGCGAAATATATATATATATATATTTATATTACGTTCAATGTCAAT GGTTAGTGACTGAGCTTAATAAATGAGTGGCTAATATCTTAATTAGAGGCCATCGTGACGAAAAG AAAACCCACACCCCTGCCAAAAATCCTTTTGTTTTCAATCAAATTTTCCCATGAAACCCATGACG CCCCACCCGCCCATAGAAAATCAAGGTAATTACAAAGAAATGACTCCATCAAAGTGCAGCCAACA AAAAAAAAAATAGAGTTAATTTGAAGCTCACGTGACTAACACAAGACAGAAGCTAAATTAACAAT TTTACAGCTGCAGTCGGCGGGCGGGAAAAGTGGAAAAGGGGGACTTTCCCCGATTGAAGGCCCAA ACAATTATGCGCCCCAACATGGCAACCGACTGGTCGGAGATACAT Right flanking sequence: Indices 4680261 -- 4680760 TCCAATAATTGCCAGCTCAACATGGGAAGGGCCCGTGGCCCCAGCAAAGCCTTGTGTGTGTATAA AAATCACTCAATTGCCCCCGACGGATCAATTCAATGCAGTTCATGGCCTCGTGACTAGATAACTT TCCAAAGTTCGACTGACTGGCAGCTGCAACATAATGGCGTTAAATTACCAATATAAATCAATGGG TTAAACATAACGAAAACCAACACCCGCATCGCTCGATCAACAAGAATACAAATGAAAAAAAAAAG ATATAATATTAGGGAGCGGTTTTCTGGTGGGGGGGATCGAAATCTCAAAGTCTCCAAAGGGCACC GGCTATCGTTTACTTAGCCATCAGAAACCAGTTGAACAACTTGACTTGGATGCTGGCCAAAGACT TTTTCTTTCTTTTGAAGCGAGTTTATTTTTATCTGAGTGGAATTACATAGATATGTATGTACATG TACATATACAACTATACGACCCGGCTCACTCAATCCTTGGAGAGT Found at i:4682038 original size:16 final size:15 Alignment explanation
Indices: 4682019--4682054 Score: 63 Period size: 16 Copynumber: 2.3 Consensus size: 15 4682009 ACTTTGTTCG 4682019 TTTTTTTCTTTTCTTT 1 TTTTTTTCTTTT-TTT 4682035 TTTTTTTCTTTTTTT 1 TTTTTTTCTTTTTTT 4682050 TTTTT 1 TTTTT 4682055 ATAACCTTTA Statistics Matches: 20, Mismatches: 0, Indels: 1 0.95 0.00 0.05 Matches are distributed among these distances: 15 8 0.40 16 12 0.60 ACGTcount: A:0.00, C:0.08, G:0.00, T:0.92 Consensus pattern (15 bp): TTTTTTTCTTTTTTT Left flanking sequence: Indices 4681519 -- 4682018 AATACAAAAGAATTAAATAAACACCTGCTTTTGTTGACTTTCTTCAACGAAATTTCCCTATCTGC ATGGCCTATCTGAAATATTTAAAAGCTGTTTCCACATTCATTTTCAGAAAACACACTAAAACCTG AATCAAAGTTTCACTTTCGAAATATTCATTAACTTAACGACTACAAGTTTTTGGGTTGGCAATTT CTTAACCCATGTTTATTACGCTGCAGACGGTTGTTGGCTGTTGAGGTCCTCTCACTACACACTGT ACTGCAACAATTTGTGGTTTTGTTAATTATTTTATAGCATAGCTGCTCATATGGGAATTACACAC TTTATGCTAATCAACAGTTTCCTTGGACTTCCGTTTGTTATTTCGCATTTTTTTTTATCGATTTT ATCATTGCCAATCCTGGTGATTGAAAATGAAGGGGCTTCGCAGTGTTATCAAACTTTTGGCATCG CTCTAACCATCAATTTGTGCAGCTGAAATCTCAAAACTTTGTTCG Right flanking sequence: Indices 4682055 -- 4682554 ATAACCTTTATGGCAGGGGTTTGTCTGTTCAAAAAAAAAATTTTCTCGTCGTGTTTTTCAATGCA TTTTCACTTACTGCAAACTTGGCACTTTTTTCCCCATTGTGCTTGGCTTTTTGCTGATGAGGTGA GAGTTTTCAAGCAAATAAAGAGTGTAAACAGATTTTGCCTTACTAATGAGCGGCGAAGTGAGGAG GGGATAAGGATGGTCTTAAGCACACCATACATGTGTTTCTTTAAGTTAATTAATTACATTGTTTT CAGAGATGTCCATTTGGAATTTTCCTGAATGGAAAAATCGTTTTAAAAGGGTCAGCTAAAATGGG AACTATTATACACGAGCTGATATTTATGATTTAAATTTATGATTCTCTTTGCTTTAAGATTTTAA ATTTTAAACACTTCTATTGGTCATTGCTCTACTATATTTTCCTAGCCCAAGGTGACAATTTCTTT CTATTTTGCTAATGATGACATTTAATTACACAAATAGAAATTGCC Found at i:4682041 original size:11 final size:11 Alignment explanation
Indices: 4682021--4682052 Score: 57 Period size: 11 Copynumber: 2.9 Consensus size: 11 4682011 TTTGTTCGTT * 4682021 TTTTTCTTTTC 1 TTTTTTTTTTC 4682032 TTTTTTTTTTC 1 TTTTTTTTTTC 4682043 TTTTTTTTTT 1 TTTTTTTTTT 4682053 TTATAACCTT Statistics Matches: 20, Mismatches: 1, Indels: 0 0.95 0.05 0.00 Matches are distributed among these distances: 11 20 1.00 ACGTcount: A:0.00, C:0.09, G:0.00, T:0.91 Consensus pattern (11 bp): TTTTTTTTTTC Left flanking sequence: Indices 4681521 -- 4682020 TACAAAAGAATTAAATAAACACCTGCTTTTGTTGACTTTCTTCAACGAAATTTCCCTATCTGCAT GGCCTATCTGAAATATTTAAAAGCTGTTTCCACATTCATTTTCAGAAAACACACTAAAACCTGAA TCAAAGTTTCACTTTCGAAATATTCATTAACTTAACGACTACAAGTTTTTGGGTTGGCAATTTCT TAACCCATGTTTATTACGCTGCAGACGGTTGTTGGCTGTTGAGGTCCTCTCACTACACACTGTAC TGCAACAATTTGTGGTTTTGTTAATTATTTTATAGCATAGCTGCTCATATGGGAATTACACACTT TATGCTAATCAACAGTTTCCTTGGACTTCCGTTTGTTATTTCGCATTTTTTTTTATCGATTTTAT CATTGCCAATCCTGGTGATTGAAAATGAAGGGGCTTCGCAGTGTTATCAAACTTTTGGCATCGCT CTAACCATCAATTTGTGCAGCTGAAATCTCAAAACTTTGTTCGTT Right flanking sequence: Indices 4682053 -- 4682552 TTATAACCTTTATGGCAGGGGTTTGTCTGTTCAAAAAAAAAATTTTCTCGTCGTGTTTTTCAATG CATTTTCACTTACTGCAAACTTGGCACTTTTTTCCCCATTGTGCTTGGCTTTTTGCTGATGAGGT GAGAGTTTTCAAGCAAATAAAGAGTGTAAACAGATTTTGCCTTACTAATGAGCGGCGAAGTGAGG AGGGGATAAGGATGGTCTTAAGCACACCATACATGTGTTTCTTTAAGTTAATTAATTACATTGTT TTCAGAGATGTCCATTTGGAATTTTCCTGAATGGAAAAATCGTTTTAAAAGGGTCAGCTAAAATG GGAACTATTATACACGAGCTGATATTTATGATTTAAATTTATGATTCTCTTTGCTTTAAGATTTT AAATTTTAAACACTTCTATTGGTCATTGCTCTACTATATTTTCCTAGCCCAAGGTGACAATTTCT TTCTATTTTGCTAATGATGACATTTAATTACACAAATAGAAATTG Found at i:4683909 original size:11 final size:11 Alignment explanation
Indices: 4683893--4683916 Score: 41 Period size: 11 Copynumber: 2.2 Consensus size: 11 4683883 CTTTTTTAAA * 4683893 ATATATTTTTT 1 ATATATTTTGT 4683904 ATATATTTTGT 1 ATATATTTTGT 4683915 AT 1 AT 4683917 CCTTATAATT Statistics Matches: 12, Mismatches: 1, Indels: 0 0.92 0.08 0.00 Matches are distributed among these distances: 11 12 1.00 ACGTcount: A:0.29, C:0.00, G:0.04, T:0.67 Consensus pattern (11 bp): ATATATTTTGT Left flanking sequence: Indices 4683393 -- 4683892 TCAAGAAAGCAAAAGCCGACCGACGTACGTACGTGGAAAACGTTCAGTTCGAAATATGCTCAAAA ATGCCCACTCACTAATACCTCCAAAGAAGTGTGCGTGCATGTGAGCCAGGTAAGCATACACATAA ACCTGCACACACAGGTAGACGACAAAAACACGTAAACTTGTTGCTGGCAACATGAGCGAAAAATG TTGCCCGGCAACTTTTCGCTGGCAACCCGGTTTGAACCTTATTTTATGGGACACGTTTACCACTG TGTGTGTGTGTGTGTGTATGTGTGTACAGGTGTGTTGTGTAGAGTTTCGGCTCACTCAAATCGCT CGAATGTGTGTGGTTAGGCGACAAAGCTACAAAATCTGAATAAGAATGGGCAGCACTGGCAACGG GTTTCGCTTTAAATTGAGACTCCTTGCGTTGTTAACCCCAAAAGTTTTGACCCGTCAATCCTTTT AATAAAATGCATGTGCGAATATTTGCAGTCTTCGTCTTTTTTAAA Right flanking sequence: Indices 4683917 -- 4684416 CCTTATAATTTTTAGTTTATAATTAAGAGTTTAATAGCATAGGGTTAAGCAAGAACTTATCCCTG CACATGTCCCTCTCTTTCTTTTATTTGCCCCTCTTCTTTGTGCGAAGGAGTTACGCAGTTGTTGC TGTTGTTCAAGTTTGCAATCAAAGATAAAAGAAAAACTTGGCAAAATTCTGATGTTTTTATGTGG TTTTTATTTTTTGTTGCTGGCAATGCAGCAGTGTGAAGTTGGTATTTATAGGAATGCTGGTTGTT GTTGCTGTTGCCAGAGCTGCTGTGAATTTGCAATGAGCGAAATGGTTAAGGAACTTAAAAACAGG TAAAAAAAAGGAGCTCAACAGATGGCTGCTGAAGTGCAATGAAAATGCAATGAGTCAACGGCTGC AAGGGCGTTATTCCACATAAATATACATACATGTATATGTCTTCGATTTGCAGGTATGCCAGTGA ATTCCATAATCATAAGCTTTGAAGGAAAAGGAATTGACTGGGCGA Found at i:4683947 original size:14 final size:14 Alignment explanation
Indices: 4683919--4683949 Score: 41 Period size: 14 Copynumber: 2.2 Consensus size: 14 4683909 TTTTGTATCC *** 4683919 TTATAATTTTTAGT 1 TTATAATTAAGAGT 4683933 TTATAATTAAGAGT 1 TTATAATTAAGAGT 4683947 TTA 1 TTA 4683950 ATAGCATAGG Statistics Matches: 14, Mismatches: 3, Indels: 0 0.82 0.18 0.00 Matches are distributed among these distances: 14 14 1.00 ACGTcount: A:0.35, C:0.00, G:0.10, T:0.55 Consensus pattern (14 bp): TTATAATTAAGAGT Left flanking sequence: Indices 4683419 -- 4683918 ACGTACGTGGAAAACGTTCAGTTCGAAATATGCTCAAAAATGCCCACTCACTAATACCTCCAAAG AAGTGTGCGTGCATGTGAGCCAGGTAAGCATACACATAAACCTGCACACACAGGTAGACGACAAA AACACGTAAACTTGTTGCTGGCAACATGAGCGAAAAATGTTGCCCGGCAACTTTTCGCTGGCAAC CCGGTTTGAACCTTATTTTATGGGACACGTTTACCACTGTGTGTGTGTGTGTGTGTATGTGTGTA CAGGTGTGTTGTGTAGAGTTTCGGCTCACTCAAATCGCTCGAATGTGTGTGGTTAGGCGACAAAG CTACAAAATCTGAATAAGAATGGGCAGCACTGGCAACGGGTTTCGCTTTAAATTGAGACTCCTTG CGTTGTTAACCCCAAAAGTTTTGACCCGTCAATCCTTTTAATAAAATGCATGTGCGAATATTTGC AGTCTTCGTCTTTTTTAAAATATATTTTTTATATATTTTGTATCC Right flanking sequence: Indices 4683950 -- 4684449 ATAGCATAGGGTTAAGCAAGAACTTATCCCTGCACATGTCCCTCTCTTTCTTTTATTTGCCCCTC TTCTTTGTGCGAAGGAGTTACGCAGTTGTTGCTGTTGTTCAAGTTTGCAATCAAAGATAAAAGAA AAACTTGGCAAAATTCTGATGTTTTTATGTGGTTTTTATTTTTTGTTGCTGGCAATGCAGCAGTG TGAAGTTGGTATTTATAGGAATGCTGGTTGTTGTTGCTGTTGCCAGAGCTGCTGTGAATTTGCAA TGAGCGAAATGGTTAAGGAACTTAAAAACAGGTAAAAAAAAGGAGCTCAACAGATGGCTGCTGAA GTGCAATGAAAATGCAATGAGTCAACGGCTGCAAGGGCGTTATTCCACATAAATATACATACATG TATATGTCTTCGATTTGCAGGTATGCCAGTGAATTCCATAATCATAAGCTTTGAAGGAAAAGGAA TTGACTGGGCGAAGAAAAACTACAAAGTACTACACTAAAAAAAGG Found at i:4688128 original size:18 final size:18 Alignment explanation
Indices: 4688101--4688161 Score: 94 Period size: 18 Copynumber: 3.4 Consensus size: 18 4688091 TCTGCCCAAT * ** 4688101 TGTTGTTGCTCCTGCACC 1 TGTTGTTGCTGCTGCTGC * 4688119 TGTTGATGCTGCTGCTGC 1 TGTTGTTGCTGCTGCTGC 4688137 TGTTGTTGCTGCTGCTGC 1 TGTTGTTGCTGCTGCTGC 4688155 TGTTGTT 1 TGTTGTT 4688162 CACTGGCCAG Statistics Matches: 38, Mismatches: 5, Indels: 0 0.88 0.12 0.00 Matches are distributed among these distances: 18 38 1.00 ACGTcount: A:0.03, C:0.23, G:0.30, T:0.44 Consensus pattern (18 bp): TGTTGTTGCTGCTGCTGC Left flanking sequence: Indices 4687601 -- 4688100 TGACCGTGTGGCCTAATGGATAAGGCGTCGGACTTCGGATCCGAAGATTGCAGGTTCGAGTCCTG TCACGGTCGTAAAATTAACTTTTTTCTTTTGTATCCAGAATTTTTTTTATTTATTTTATGAAAAT GAGATTTGAGGGCATTTGGTTGCATTTATCACACTTTGTAAGTCTGTATCTCACCTTCTTGAAGC GCCTTCGCTGCGATGAGGAGTGCGTCGATGCAGTTTCGAGCAGATTGCTGTTGTTATCCCCCCCA TCCCTTTTGCCCAGTGCCTGGAGAAGATCGTCAACGTTGCGTATATAGGGGCGATCTCGATCCCC GCCGCGTTCCCTTTCCTTTTCGCCACCCCCTCCACCGCCGCCCATGCAGCTGGTTATGCTCCGAT TGCCCACACTATTGCTACGCGATCGGGATCTGGTCTTTTGCTTGCCCAGCCAGTAAACCTGATTT GCCAAATTTATTTCGGCGGCTGCCGCAGCCTTTCTTCTGCCCAAT Right flanking sequence: Indices 4688162 -- 4688661 CACTGGCCAGATATTCGCCGGCTATATGAACCTTGGGTGCACTAACCAACTGCAGGCCAGTGGCG CCGAATTGCTGAGGGAATTCGTGCAACTCGAGGGGGAAACGGGGATCCATGGTCTGACCCGGTTG ACGCGGGTACATATAGCCATCGCGTAGAAACATCTTGCTGGTGGTATAGACCCTATCCGCGATTT GGTACACTCCACTCGAGCCGGGACCCTCGGCGCCGCCAATAATTCCATTTCGGACATAGGCTGTC GGGCGATAGCGAACGAGTGGGTTATATACATTCGATTTGGGGGGTTTCGTTTTGAAACTGCGACG TCGCGTGCTGGGCTTCATATTTTTGTTGTATTTAATTTTCGTTTTTGTTCGTTTGTATTTGCACC CCGCGATAACAGAATGTTTGCTCTACAGAAAATCCACCCTTGTGCTGTAGGTTGCTTGCACACGT ATCAAATGTTTTCGAGTTTAAGCGTGCTTGGAACAAGCGACCGTG Found at i:4688146 original size:15 final size:15 Alignment explanation
Indices: 4688128--4688159 Score: 57 Period size: 15 Copynumber: 2.1 Consensus size: 15 4688118 CTGTTGATGC * 4688128 TGCTGCTGCTGTTGT 1 TGCTGCTGCTGCTGT 4688143 TGCTGCTGCTGCTGT 1 TGCTGCTGCTGCTGT 4688158 TG 1 TG 4688160 TTCACTGGCC Statistics Matches: 16, Mismatches: 1, Indels: 0 0.94 0.06 0.00 Matches are distributed among these distances: 15 16 1.00 ACGTcount: A:0.00, C:0.22, G:0.34, T:0.44 Consensus pattern (15 bp): TGCTGCTGCTGCTGT Left flanking sequence: Indices 4687628 -- 4688127 TCGGACTTCGGATCCGAAGATTGCAGGTTCGAGTCCTGTCACGGTCGTAAAATTAACTTTTTTCT TTTGTATCCAGAATTTTTTTTATTTATTTTATGAAAATGAGATTTGAGGGCATTTGGTTGCATTT ATCACACTTTGTAAGTCTGTATCTCACCTTCTTGAAGCGCCTTCGCTGCGATGAGGAGTGCGTCG ATGCAGTTTCGAGCAGATTGCTGTTGTTATCCCCCCCATCCCTTTTGCCCAGTGCCTGGAGAAGA TCGTCAACGTTGCGTATATAGGGGCGATCTCGATCCCCGCCGCGTTCCCTTTCCTTTTCGCCACC CCCTCCACCGCCGCCCATGCAGCTGGTTATGCTCCGATTGCCCACACTATTGCTACGCGATCGGG ATCTGGTCTTTTGCTTGCCCAGCCAGTAAACCTGATTTGCCAAATTTATTTCGGCGGCTGCCGCA GCCTTTCTTCTGCCCAATTGTTGTTGCTCCTGCACCTGTTGATGC Right flanking sequence: Indices 4688160 -- 4688659 TTCACTGGCCAGATATTCGCCGGCTATATGAACCTTGGGTGCACTAACCAACTGCAGGCCAGTGG CGCCGAATTGCTGAGGGAATTCGTGCAACTCGAGGGGGAAACGGGGATCCATGGTCTGACCCGGT TGACGCGGGTACATATAGCCATCGCGTAGAAACATCTTGCTGGTGGTATAGACCCTATCCGCGAT TTGGTACACTCCACTCGAGCCGGGACCCTCGGCGCCGCCAATAATTCCATTTCGGACATAGGCTG TCGGGCGATAGCGAACGAGTGGGTTATATACATTCGATTTGGGGGGTTTCGTTTTGAAACTGCGA CGTCGCGTGCTGGGCTTCATATTTTTGTTGTATTTAATTTTCGTTTTTGTTCGTTTGTATTTGCA CCCCGCGATAACAGAATGTTTGCTCTACAGAAAATCCACCCTTGTGCTGTAGGTTGCTTGCACAC GTATCAAATGTTTTCGAGTTTAAGCGTGCTTGGAACAAGCGACCG Found at i:4695351 original size:15 final size:15 Alignment explanation
Indices: 4695327--4695356 Score: 46 Period size: 15 Copynumber: 2.0 Consensus size: 15 4695317 ATTGAATCCG 4695327 AAACAAAACAAAAAA 1 AAACAAAACAAAAAA * * 4695342 AAATAAAACACAAAA 1 AAACAAAACAAAAAA 4695357 GTTAAAAATT Statistics Matches: 13, Mismatches: 2, Indels: 0 0.87 0.13 0.00 Matches are distributed among these distances: 15 13 1.00 ACGTcount: A:0.83, C:0.13, G:0.00, T:0.03 Consensus pattern (15 bp): AAACAAAACAAAAAA Left flanking sequence: Indices 4694827 -- 4695326 CTCAATCCAATTTGCATTTGATTTTTAGTCTTAAGCTGAGATCCAAAGAATAAAGTCGTGAAACT ATTTCTCCTAAAAACTATTTTTTATTTCTTGGCGTTGTCCTTAGTCAACTGACGGGACATTAGTT CGACTCATAAATAAAACAACAATTTTACTGGCGCAGTCGGTAGGATACAAAAGTATCCGAAAAAA AAGAACCTTCGAGTGGAAAATAAGTTAAATTTTATAGTCCAGTGCTCGAAACATCTCCCAAAATA AATTCGTGAAAACTCTTCAACTTGGATTATAATTCCAATTCGGTTATCCAATAATAAGTGGAAGT GAAATACGAAACAAAAATATTAAGTCCAAAGGCAACTAAGTTTTAAAACCAACATATAAAAATAA AAAAATTAAAACAATATAGAATTTTAATAATACAACACAAAAATTTACAAAACAAAAAAAACAAA CAAGTGAAACTAGAAAGCTTAAAAATAATAATAACATTGAATCCG Right flanking sequence: Indices 4695357 -- 4695856 GTTAAAAATTTTACAATAAAAATGTCACAACCAATTATTGCGCTGAGCGACATAAACCTTGCCGA AGCCCGTCGGCAGCTTAAAGACATTATGCCATTCAAGGGTGATCCAGAAACCCTTCACACCTTTA TCAGCAGAGTGGATTACGTAATTTCGCTCTACCAAACAAATGATGTCCGACAACAGAGGATTCTA CTGGGAGCCATCGAAAGGAACTTGGACGGACAAATTACACGATCTTTGGGACTTCCGAACATCGA AGATTGGCCTACCCTTAAAGCAAGACTCATCGCGGAATTTAAAATTCAAACACCAAACTACAAAC TTCTGGAGAACTTCAGGGAGACACCATACAGAGGAAGCCTAAGAGCATTCTGCGAAGAAGCGGAG AGACGACGTCAATTACTAATTTCGAAACTACACCTGGAAGGTAACCAATCGGATTTTCTTATTTA TATTCAGGGTATTAAAGAATCTATTAAGATACTGATAAGGAAACT Found at i:4695386 original size:14 final size:14 Alignment explanation
Indices: 4695359--4695386 Score: 42 Period size: 14 Copynumber: 2.0 Consensus size: 14 4695349 ACACAAAAGT * * 4695359 TAAAAATTTTACAA 1 TAAAAATGTCACAA 4695373 TAAAAATGTCACAA 1 TAAAAATGTCACAA 4695387 CCAATTATTG Statistics Matches: 12, Mismatches: 2, Indels: 0 0.86 0.14 0.00 Matches are distributed among these distances: 14 12 1.00 ACGTcount: A:0.57, C:0.11, G:0.04, T:0.29 Consensus pattern (14 bp): TAAAAATGTCACAA Left flanking sequence: Indices 4694859 -- 4695358 AAGCTGAGATCCAAAGAATAAAGTCGTGAAACTATTTCTCCTAAAAACTATTTTTTATTTCTTGG CGTTGTCCTTAGTCAACTGACGGGACATTAGTTCGACTCATAAATAAAACAACAATTTTACTGGC GCAGTCGGTAGGATACAAAAGTATCCGAAAAAAAAGAACCTTCGAGTGGAAAATAAGTTAAATTT TATAGTCCAGTGCTCGAAACATCTCCCAAAATAAATTCGTGAAAACTCTTCAACTTGGATTATAA TTCCAATTCGGTTATCCAATAATAAGTGGAAGTGAAATACGAAACAAAAATATTAAGTCCAAAGG CAACTAAGTTTTAAAACCAACATATAAAAATAAAAAAATTAAAACAATATAGAATTTTAATAATA CAACACAAAAATTTACAAAACAAAAAAAACAAACAAGTGAAACTAGAAAGCTTAAAAATAATAAT AACATTGAATCCGAAACAAAACAAAAAAAAATAAAACACAAAAGT Right flanking sequence: Indices 4695387 -- 4695886 CCAATTATTGCGCTGAGCGACATAAACCTTGCCGAAGCCCGTCGGCAGCTTAAAGACATTATGCC ATTCAAGGGTGATCCAGAAACCCTTCACACCTTTATCAGCAGAGTGGATTACGTAATTTCGCTCT ACCAAACAAATGATGTCCGACAACAGAGGATTCTACTGGGAGCCATCGAAAGGAACTTGGACGGA CAAATTACACGATCTTTGGGACTTCCGAACATCGAAGATTGGCCTACCCTTAAAGCAAGACTCAT CGCGGAATTTAAAATTCAAACACCAAACTACAAACTTCTGGAGAACTTCAGGGAGACACCATACA GAGGAAGCCTAAGAGCATTCTGCGAAGAAGCGGAGAGACGACGTCAATTACTAATTTCGAAACTA CACCTGGAAGGTAACCAATCGGATTTTCTTATTTATATTCAGGGTATTAAAGAATCTATTAAGAT ACTGATAAGGAAACTACCAATACAATTATTCACTATTTTAGCCCA Found at i:4704117 original size:13 final size:13 Alignment explanation
Indices: 4704099--4704125 Score: 54 Period size: 13 Copynumber: 2.1 Consensus size: 13 4704089 GTTTCTGTTG 4704099 TGGTTCCATTTGT 1 TGGTTCCATTTGT 4704112 TGGTTCCATTTGT 1 TGGTTCCATTTGT 4704125 T 1 T 4704126 TTGCTTTTGT Statistics Matches: 14, Mismatches: 0, Indels: 0 1.00 0.00 0.00 Matches are distributed among these distances: 13 14 1.00 ACGTcount: A:0.07, C:0.15, G:0.22, T:0.56 Consensus pattern (13 bp): TGGTTCCATTTGT Left flanking sequence: Indices 4703599 -- 4704098 TAAATAGATTTATTGTCTGCTCGGCTGCATGACAAAACAAAAGACTTAGGCGACAAACTCGTTTC TTTGTGTTTCAGCCAGATACATTACTGTTTTGCATAGATTGCCATGGTATCTTGGTGGGAAATTT AGCTTTGATGGATCATCGACGAGTGCAGTTTATTCGACTGTAGAAACAATTATATTTTTTTATAA TTTTAAAAGAAATTAGCCTTAGTAAAAATGAGATGCAACATAAATTTAAGTTTTTTTTTTTTTGA AGCGTAAGTTTACCAAACTGGATTTATTGATTATTTATAACTAAATGCTAAATGTGATTATTACA TCGTTTATAGCTTTGTGTGAAAGCTTAACAAATTAGCCTATCGTTTATATCTGATCATTATTTGG AATAAGTAAATCCCCCAATTTGTATCCGCACCCAGCTCTGCCCTTTACCCTCGACCCTTTGAAAG CTGTTTTTAAATCGTATTTATTGTTTCGATCTCGAGTTTCTGTTG Right flanking sequence: Indices 4704126 -- 4704625 TTGCTTTTGTTATGCTAAAACCAATTGGTGGCAACCTTTTGGTATTTAAACTTGACTTTAGCCAG CGGCAGCTAAAACAAACTTCTCTTTATAGCACTAAATGCTGGTTGTTGCTGTTGCCGTGTTTTAT TTGTGCCTTTTCGATGTTTTTGTTATTGTTATTGTTATTATAATCTGTCTGCTCGGCGGAGTCTC CCATCAAGACGTCACGTAATAGACGATCGGTCGGTCACTGGTTACACCTGTTTTAGCGCCGTCTT TTGGGGTTTTTCTTTCTGTAAGAAATCGTGTAATGATATGCTAGCAGCAGGGTTTACGGTTACAC GTTTTCCGACTCAATGAAAAGTTCATCAAACGCATCGGCATGCCACAAGTGGCAATTGGCTGCTC AAACTGTAATCTGCAAAAGTCTTTGACTTTCGGGTAAGGAAAATCACGGAAAACTTACGGAATAG CTTTTAAATTAAGGGGAAACCCATATAAAAGCAGCAATCCTCGAA Found at i:4704136 original size:11 final size:11 Alignment explanation
Indices: 4704120--4704141 Score: 37 Period size: 11 Copynumber: 2.0 Consensus size: 11 4704110 GTTGGTTCCA * 4704120 TTTGTTTTGCT 1 TTTGTTATGCT 4704131 TTTGTTATGCT 1 TTTGTTATGCT 4704142 AAAACCAATT Statistics Matches: 10, Mismatches: 1, Indels: 0 0.91 0.09 0.00 Matches are distributed among these distances: 11 10 1.00 ACGTcount: A:0.05, C:0.09, G:0.18, T:0.68 Consensus pattern (11 bp): TTTGTTATGCT Left flanking sequence: Indices 4703620 -- 4704119 CGGCTGCATGACAAAACAAAAGACTTAGGCGACAAACTCGTTTCTTTGTGTTTCAGCCAGATACA TTACTGTTTTGCATAGATTGCCATGGTATCTTGGTGGGAAATTTAGCTTTGATGGATCATCGACG AGTGCAGTTTATTCGACTGTAGAAACAATTATATTTTTTTATAATTTTAAAAGAAATTAGCCTTA GTAAAAATGAGATGCAACATAAATTTAAGTTTTTTTTTTTTTGAAGCGTAAGTTTACCAAACTGG ATTTATTGATTATTTATAACTAAATGCTAAATGTGATTATTACATCGTTTATAGCTTTGTGTGAA AGCTTAACAAATTAGCCTATCGTTTATATCTGATCATTATTTGGAATAAGTAAATCCCCCAATTT GTATCCGCACCCAGCTCTGCCCTTTACCCTCGACCCTTTGAAAGCTGTTTTTAAATCGTATTTAT TGTTTCGATCTCGAGTTTCTGTTGTGGTTCCATTTGTTGGTTCCA Right flanking sequence: Indices 4704142 -- 4704641 AAAACCAATTGGTGGCAACCTTTTGGTATTTAAACTTGACTTTAGCCAGCGGCAGCTAAAACAAA CTTCTCTTTATAGCACTAAATGCTGGTTGTTGCTGTTGCCGTGTTTTATTTGTGCCTTTTCGATG TTTTTGTTATTGTTATTGTTATTATAATCTGTCTGCTCGGCGGAGTCTCCCATCAAGACGTCACG TAATAGACGATCGGTCGGTCACTGGTTACACCTGTTTTAGCGCCGTCTTTTGGGGTTTTTCTTTC TGTAAGAAATCGTGTAATGATATGCTAGCAGCAGGGTTTACGGTTACACGTTTTCCGACTCAATG AAAAGTTCATCAAACGCATCGGCATGCCACAAGTGGCAATTGGCTGCTCAAACTGTAATCTGCAA AAGTCTTTGACTTTCGGGTAAGGAAAATCACGGAAAACTTACGGAATAGCTTTTAAATTAAGGGG AAACCCATATAAAAGCAGCAATCCTCGAAACTCCTCCTTCTCAGC Found at