TRAP (Tandem Repeats Analysis Program) TRF Version 4.00 Sequence: arm_3L assembled 2004-3-14 md5checksum:58b150ba3706a94f84f5242c20c22999 Parameters: 2 5 7 80 10 25 1000 Pmatch=0.80,Pindel=0.10 tuple sizes 0,4,5,7 tuple distances 0, 29, 159, 1000 Length: 23771897 ACGTcount: A:0.29, C:0.21, G:0.21, T:0.29 Warning! 300 characters in sequence are not A, C, G, or T Found at i: i:15605241 original size:12 final size:13 Alignment explanation
Indices: 15605221--15605245 Score: 36 Period size: 12 Copynumber: 2.0 Consensus size: 13 15605211 CATTGCATAT * 15605221 AAAGTTGCAGCAA 1 AAAGTTGCACCAA 15605234 AAAG-TGCACCAA 1 AAAGTTGCACCAA 15605246 GGGAGCCACA Statistics Matches: 11, Mismatches: 1, Indels: 1 0.85 0.08 0.08 Matches are distributed among these distances: 12 7 0.64 13 4 0.36 ACGTcount: A:0.48, C:0.20, G:0.20, T:0.12 Consensus pattern (13 bp): AAAGTTGCACCAA Left flanking sequence: Indices 15604721 -- 15605220 TCAATACTTTTAAACTGATTAGACATTATGTATATTTTCCGCGCTCTTCAATATACCTTTCAGTT TTTTAAACTTTTACGCTGTCACGTAATTTGAAACTCAAACTTTTCATCACATTGCTTGCAATAGA TTCCTGTGTGTCCTGGAAGCCTTAAGCGCTATCTACCTTGGCGATCTCAAAAATTACTTACGAAT AGTTTGCTTCCTTGTCAGCCGGCTTCCAGTGACTTCCTGGCGTTTCTGCCCTGGTCTCTTGGACA CACAATCAATCATAATTGTTTCTCAGTTTGTCAACAAACTACGAGTTTGGTGGTGCTGGAGTTTC GAGTTGTCTGTTATCGCAATGCAACCAGGTTGTGGCTATGGGCGGCTGGCCACGCCCACTTCCAG CGGCATCAAGCAAGTTTCAGCACAAAGCCATTGACATTTGTGGGCGGGAATTTGGGAGGCGACCG GGAAGAAAGGAATCGCGTTTGCTAGCTTTTGGCGGCATTGCATAT Right flanking sequence: Indices 15605246 -- 15605745 GGGAGCCACAACAATAACGAAGGACGAAGGCTGATAAGCGTCGAAACGGAAGTGGCACACAGACA CGGGACTAGCTTAATGGGTATGAGTGTATTGGTACACTTGGAGAAAACATTGAAATTGAAATGTT GACGAAATTATTAATTCGATTTTTTTACCATCTAACAAAGTTCTAAGCCGAATAAATATTTGATA AGGCATTTTAAGAACAGCTTATGTTTCAGTTGCATCCTTTCAAATTAAAGTAGATATTTCTTTGA GTGCAGCGACAAATGTGTGGCAAAGAAAAAATCGCTTGGCAGGCGAGGATGGGCGACGCAACAGT TTGCCAGGGGATATTGACGGACCAGAGTCGCGTTGAGTTGCTATCAATGGCATTGGAGGAATTCC CCAGTGTGTCCTGCGTGGCAGCAAAGCATGAAAACCCGATTACGCTCAGTTGATATGCAAGGACC TCCCCGCCAGTCTCCATGCCCCCATCCCTTAAGTACATATAGATA Found at i:15611320 original size:12 final size:12 Alignment explanation
Indices: 15611303--15611326 Score: 48 Period size: 12 Copynumber: 2.0 Consensus size: 12 15611293 TTAAATGCCA 15611303 AACAAATTTTGC 1 AACAAATTTTGC 15611315 AACAAATTTTGC 1 AACAAATTTTGC 15611327 CGTTATCGAA Statistics Matches: 12, Mismatches: 0, Indels: 0 1.00 0.00 0.00 Matches are distributed among these distances: 12 12 1.00 ACGTcount: A:0.42, C:0.17, G:0.08, T:0.33 Consensus pattern (12 bp): AACAAATTTTGC Left flanking sequence: Indices 15610803 -- 15611302 ATTGTGCCCCACCATGAGGTAGGTACAGAGAAATATGTTATCTAGGTTAGTTGTGGCATTATTGA TCTGCAATTTATCTAACTAGGTGATAAGCGAGTTGATAAATTGAAACTACCAATGCTTCTGCACA GGTAGAAATAAATGATTATCTCACAGCATGCTTAGAAAATGTACTTATATCTTAGATTTAAGATA TGAAAACCTCTTGCTGGTTCATTCAAATGTATGGTTTATCAAAAAACAAGGCAACAAAAGTCATC GGTTTTAGTTAAACACAATTTTGCACACTCAAATGGGCGTAACATAGCCCTATTTATGTGCACTT TGAACCTATCATCTGTGCTTACTCACAATGGCTCAACTATGGTATCAGTTGTTAAGTTGAAATGC CAGGACACAAAAGCACACCAAAAATCGACAGAAACCATGGCAGAAATGCAACAACTTAAGCTCTG GCAGCCCCACACAATACACAAATCCCAGTTTTGGCTTAAATGCCA Right flanking sequence: Indices 15611327 -- 15611826 CGTTATCGAAATGACCCATTGACTGCTGTGCTCTTTGGCTCACACATACACACACACACACACAT ATACGCACATTCAGGCGCAAACAAACACTCTAAAACACATATCGCTCTAATGAAACGCAATATCT TCGAGACAATGCTAATTGCCAACGATGCAAACAGAAGCTGCATTGAGCGCAGCATATGCAACCAA ATTATCCGACGAAATTTCTACAGCCCGTGCACTGAGAAAAATATTTTATGCTATCGCACTAATAT AAATATACAATGATCAATCAATAATCCCCTAACTCATAAGTAGATGGGCCAGCATTTCTTTCAAA AAGCATTTATTTATATTTTTAAAACTAAATCACTAAATACCAATATGTTTTTAAAGTTGCGGCAA TATTTTCGTTGTGTATGTGCAAGCCCGACTGGCATATTTGTGTGTGAATGTTTGCGTAGAAGCAT TCATTTCTGTGAACGTTTCGTTAACTTGGCCAAAAGCCAATTTTC Found at i:15613117 original size:14 final size:14 Alignment explanation
Indices: 15613080--15613124 Score: 62 Period size: 14 Copynumber: 3.2 Consensus size: 14 15613070 ATTCCTTTGG * * 15613080 TTTCGGATTTTGGA 1 TTTCGGATTTCGTA * 15613094 TGTCGGATTTCGTA 1 TTTCGGATTTCGTA * 15613108 TTTCGTATTTCGTA 1 TTTCGGATTTCGTA 15613122 TTT 1 TTT 15613125 TGTGTGTGAA Statistics Matches: 26, Mismatches: 5, Indels: 0 0.84 0.16 0.00 Matches are distributed among these distances: 14 26 1.00 ACGTcount: A:0.13, C:0.11, G:0.22, T:0.53 Consensus pattern (14 bp): TTTCGGATTTCGTA Left flanking sequence: Indices 15612580 -- 15613079 GCACTCGGCGCAGCAGCAGAAGACAAAGCCCAGAATGAGCAGGATCCAGGCGGAAACCATGAGGA CTATGGTCGAGGTCGATCGATAGCTGTAGTTTTCCTCGCCGATGAGGACGAGGACTCTTTCCGCC GTTAAATTGGCATGGGTCGCAGTGCCATTTGCATGGAAATCCAGTAATCCGGCCTCCAAGGTCGG CGCATAAAAGCTATCGACATGGGCTAAAGCTGCATAACCACTGTCCACCACATGCAGGTATGGTT GCACTTTTGTCACACGCACCACTGTGTAATTAGCCATGATTGCAGCTCACTCACTCAACAAGTCC ATCAATCAATCAATCACTGTACCAGTTTATTATTTACTGAAATTTGGCACGAGAACGTACATATA AACTGAAGCCGCCAAACGTGACCGTTTCTTTGGTAACTCGCCAACAAACTAAACTAGTTGGTCTG TTCAACGTTTATTCTGCGCATATATTATTTATTTTATTCCTTTGG Right flanking sequence: Indices 15613125 -- 15613624 TGTGTGTGAAAAACAGCGACAACAGTTGACGACTGAACCGCAGTTTGGAAAGATTGTTTAATGCC CATACCCGCAATCTTCGTTATCACATTATGTATTTAAGCAGATAGATCGAGTGACAGTGGCAGCG ACAGAATCTCGTCTCTTGTTTAAACAATATTTTACGCGTATTAACGCCTACCCGCCAGATTTTGT TTAATTAATATTTTTATTTTTTGAGCCAGACAGGCCTGTTTTGGCCTTTTCCTCTCGCAGGTTCT GGCCGAGTTTTGTTTACCAGTGAGAGGTTTAGCTAAAGTTGATCGGTCGTGGTGAATTCTCCCTG GGCCCGTGGTGAAGTTCTGGTGCTGGAGAATGGCCAGAAGCTTTCTGAAATTCTTTAAAGAGCTT CCACTGTCTACTAATCGAGGTATTTCATAGGAATTTCGACAAAAAAAAGGATGGGGATAATGACC TTTCTAAGTTTTCTTGACCAGTCGAATAAATACAAAAATTGTAAT Found at i:15615356 original size:11 final size:11 Alignment explanation
Indices: 15615331--15615357 Score: 40 Period size: 11 Copynumber: 2.5 Consensus size: 11 15615321 ATGTTTTATT * 15615331 CTTTTATTTAG 1 CTTTTATTTAC * 15615342 CTTTTATTTGC 1 CTTTTATTTAC 15615353 CTTTT 1 CTTTT 15615358 CGTTATCGTT Statistics Matches: 14, Mismatches: 2, Indels: 0 0.88 0.12 0.00 Matches are distributed among these distances: 11 14 1.00 ACGTcount: A:0.11, C:0.15, G:0.07, T:0.67 Consensus pattern (11 bp): CTTTTATTTAC Left flanking sequence: Indices 15614831 -- 15615330 AACTTACCGAAAAAGATGGTTAAAACTGTTTTCAGGCGCATTATTGTAGTTTAAACTCTCTCACT ATGGGAACTTATCAGTTGGCTCACTACAGAAGTTTCCGATCCAACTGGACTTTATATAAATACCA TAAACAATATGTCTCAGAAATGACAGATGTTTTAAAAATATGGCAAACCAGAAATAAAAACCTTT AGTAAAGGGTGCAAAAGTTTTAGGAAATGTATTCAAACTAGGACAAGTTTTTGTTAAGTTGAATA AGCCTTTTATTTTGCTTCCTGGATGTCAGTAAAAAAGTACATCAAAAATTAAAAGCCGGGTGTTT TTCGTTAAAGCGGGCTACACTTTATAAAAGCTCATGTTTGGGCTCAAGGAAAACAGTTCGTAAAC GATTTTTAGTACGGAATTCACGATGTCCAAGATTACTCTGTTTATTGGTAAGGATTTGTAAATTG AATTTCACAATCCAAATACTTATATTATCAAATATATGTTTTATT Right flanking sequence: Indices 15615358 -- 15615857 CGTTATCGTTCAGGCCCAAAGTGATAGAGATATTTGTAGACGGATTGTCGCCAGATGTGAGTCAA GGGTCGTGAGAAATGGCAGAAACAACGATATTTCGAATATTTTCAATGAGAACTGTCGGCGAACA CAAAGAAATTGGCGTGAAATCTCCCGATGCGAACTCGCAAAAGCTAATTGTATATGTAAGTATAT ATAAACACTTTTTAAAAAATATATTTTATACATATGTTATCTTTGTGCAGTGACCCTTGAGCGAT GTAACACGTTGTCCTGCGAGAATGTCCGGCGAGCCCTTGCACAATAAAATACCAAGATCAGATTC GAAACATTTAATCGACATCTATAAAAAATCCGTCTTTACTGCAATTAAATAAATACTTCGATGCT CTCAATATATATGCTTAGAATTTTTTGATGAAATAAATAAAACTTACTTATACAAACAATCAATA TATAATATTTTTTCCAAACTGCTTTTCGCAATCATTATCTAGATA Found at i:15616899 original size:42 final size:42 Alignment explanation
Indices: 15616841--15616950 Score: 185 Period size: 42 Copynumber: 2.6 Consensus size: 42 15616831 TCGACGAGTC * * 15616841 GTAGTTCTAGTAGTTGGCGCACGACGACGTGTAGTTCTTCGA 1 GTAGTTCTAGTAGTTGGAGCACGACGACGTGTAGTTCTACGA * 15616883 GTAGTTCTAGTTGTTGGAGCACGACGACGTGTAGTTCTACGA 1 GTAGTTCTAGTAGTTGGAGCACGACGACGTGTAGTTCTACGA * * 15616925 GAAGATCTAGTAGTTGGAGCACGACG 1 GTAGTTCTAGTAGTTGGAGCACGACG 15616951 GGTAGTTGGG Statistics Matches: 62, Mismatches: 6, Indels: 0 0.91 0.09 0.00 Matches are distributed among these distances: 42 62 1.00 ACGTcount: A:0.23, C:0.17, G:0.32, T:0.28 Consensus pattern (42 bp): GTAGTTCTAGTAGTTGGAGCACGACGACGTGTAGTTCTACGA Left flanking sequence: Indices 15616341 -- 15616840 TTGGCATAATACTTGGAGTTTTTTTAGCCGGAATACTCTTTTACTCGCTGATGAACGAAGACTGC CGGAAAAGTTCGAGGAATATAATGAGCATTATTGGAGTGGAAATACCTCAAAACAAAAACGCCAC ATCGAAATTGGATACTGCCGCAAAAAATGTAGAAGAGAGTAGCGTAGCGGTTACACAAGAAACCC CTGCTGAATTTAATAAAGCTGATAATAATTCAACAGTTTCAATGCCCTAAGATATTAATTAAGTA ATGATATATGAAATAAATATTCTATGATAAAATGATATGATAAAATATTGTAAAAAAGTTCGATC AAAGTTGTTGAGCCAAATATATTTTGTTTTTTAAGCAGAACCTGTTATAGTAATATTGAGAGTTC TATATTTGAGAGCATTAAAGTTTTTATTGTTTTTCAGCAGGATACATTTTGCAGGATATTACTCT GAATGAAATGGTTCTAGGAGTTATTCTTCAGTAGGTCGACGAGTC Right flanking sequence: Indices 15616951 -- 15617450 GGTAGTTGGGGTCCTACGAGTAGTTCGAGGTCGTCGGGTGTCAGGAATTCGCCGGGTTGTCCTCC TTGAAGTTGGAGGGCGAGCGGTGACCCCACCATCAATGCTGTTTCTCACATTTTTGCAGTTTATA ACAGCACAACGCTCGAGTGTCACTGTTAAATCGATAGTAGTTTGATAATAAAATATTATATTTTT ATATGAAATATAGTTATTTCAAATCAGATACTTACATCGACAAGTAGCCAGAGACAATTCGCAAC GAGAGACATTTCGCCAGTTTCGAATGCCTGACTGGCGGCGGCAGTGATTATTAAATGTGGTCGAA ACATCATTTTGAACTCCCAATCTCCGTTCATTTCGACGGCAAGTTTCGTTTTCTTGACGGCAAAT TTCTTGTTCACGAGTTTGAGCCTGAACAGCCACGCAAAGGCAGAGAATAGCTAAAATAGTTATCA TAAGGGTTAATAATCTTTTATGGTATAGCGGTCTATATCCTTACC Found at i:15618604 original size:13 final size:13 Alignment explanation
Indices: 15618579--15618604 Score: 38 Period size: 13 Copynumber: 2.0 Consensus size: 13 15618569 ACCAAATTAA * * 15618579 AGCCACAGTAACC 1 AGCCAAAGAAACC 15618592 AGCCAAAGAAACC 1 AGCCAAAGAAACC 15618605 GTAGTAGCTA Statistics Matches: 11, Mismatches: 2, Indels: 0 0.85 0.15 0.00 Matches are distributed among these distances: 13 11 1.00 ACGTcount: A:0.46, C:0.35, G:0.15, T:0.04 Consensus pattern (13 bp): AGCCAAAGAAACC Left flanking sequence: Indices 15618079 -- 15618578 CAAGAGTGCAGAACTAAGACTCGGAACAATTGGCGTTGGAGGAATGTAGGACGTTGTGAGCTGAC CAGGCTGAACTGCTTGGGTAAGTTGTATATATTGTAGAAGAATGCATTACTATATACTTATAATT ATTTACCTACCATCTCATTTGCCATCAGGTTCTAATCGACGCATGAACTGTAATGATATTGCTGA ACTCGCTGGCATGGATCGTATTAATTAATAATGATAAAAATGCTTGTTTATTGATTGAAAATAAA AACACCAGAGAGCATTGAAAACCAACTTGAATATATTATCAAGAATTTAGACGAGAAGAAACTCA ATTTGTTTGCTAGGATTTGAAATGGACACTTACACTTACTTCTTCATCACAAGCAAGTGCTTTTC ACGAACTTAATTCCATTTACCATCTCAAGTCATAATTTTATGACTTTAAGCATTTATTTAAATCA AGCCCATTCGCTTCGTGATGCTGCAAATTCAGTTCACCAAATTAA Right flanking sequence: Indices 15618605 -- 15619104 GTAGTAGCTAGTAAAGCCGCAACCAAAACACAAAGGCCCAAACGCCCACCCAAAAATTGAGACAG ACCAAGGCAAAGCGAGTGACGCCTTTTGTCCGATGGCCATTGACCAAAACTCTTGCATCTTTAGT CTGTTGCATTTTTGAATTTTAACTTCGTCTGCCTGTGAATGTACTTGCTCAGATTCAATTCCAAA GCGATTATCACCACTTAGCTGTCAACGACACGACGCCAAACTCCGGTCCAAAAAACCGGCTACGG AACCGAAACCACTGCTCCCCAGCCGAATCCAAGACCAAGTCGAAAATGTTTCCAAGTCCCAGACC AAGTACGAGTGCGAACGCCAATATCGCTGGCCAGGCACTTTGGATGTGGAGCTCTCTTGACAAAG GGCATGGCTGTTGAATGTGAGTGTCTACATGTGTACCTACTTCGCTGGCTCAAATAAAATTTACA CTTACAAGTGGCGCTAAAGTCAAGTGCAATGCATTCCATATACCC Found at i:15622356 original size:22 final size:21 Alignment explanation
Indices: 15622331--15622372 Score: 54 Period size: 22 Copynumber: 2.0 Consensus size: 21 15622321 TTTTGAAAGT * 15622331 GTTTCCAAAAGTTTTTGGTTTG 1 GTTTCCAAAAG-TATTGGTTTG ** 15622353 GTTTTTAAAAGTATTGGTTT 1 GTTTCCAAAAGTATTGGTTT 15622373 TTTTTAACTT Statistics Matches: 17, Mismatches: 3, Indels: 1 0.81 0.14 0.05 Matches are distributed among these distances: 21 8 0.47 22 9 0.53 ACGTcount: A:0.21, C:0.05, G:0.21, T:0.52 Consensus pattern (21 bp): GTTTCCAAAAGTATTGGTTTG Left flanking sequence: Indices 15621831 -- 15622330 AAATTGAAGGCCAAGACCGCGACTACGACAAGAACATATCGCTTTATTGGCCGCACAGACAAGCT AGAGTAACCAAGTCAAATCTCTTCACATATGCATTTATTTGGACAAAATCACTTTTAATATTTTA GCTGCGCTCCCTTGTGGTAATCACAATGCTGGTGGGCATTCTTCTAAGTTCGCCTTGGCATCCCA GCAAGCTCGGCTATTACCAAGCAATCCAGTTTCCTCTTGTGAGCTGCAAATGCAGGAAAAAATTG TAATGCACTTTTGTAGATTGATGTCCGAAACAAACAGATTTGTGAAGTAAATGAAATAGTTTTTT CTCCTGTCCTCAAAATTTAATCAATTTGGTTTTTAAATTTACTTTTAGTCCAGAAGATGTATTTA CATTTTTAAATTAAAATCTAAAGATCCATGCCAAAAACTTTAAAGGTAAGTGACAGTGTCATATA TTTTAAATTTGAGGAAATCGAATTTTTTGTTTCACTTTTGAAAGT Right flanking sequence: Indices 15622373 -- 15622872 TTTTTAACTTACCACTGCAAGCGATCACTTGAAGATCGCAGCGAGTCTGATTCTTCCAGATGTAT CTGCCACGGACTTTCTCACGGCATCCCTCGTTCATGAACTCCACATTATTGATGGGATTATTGAG TCTTCGGATGCAAGGATTGCAAGTGTCCCTTAACTTTCGGCAGTCGGGACTTTGTCCATTAATAA GTACACAGCCAAGGAACAAGATGACGCAGATAATACTTGTCAATTGCATTTTTAAGCTTGTGTGC AAGTAAATCAACTAGAGATTTCCTTTTGGCTTAAAATAAAAAATCTCAGCTTTATATAAGTTGGA AACAAGGAAGTGTTATGTTCCAAATAGGACCACATCTGTTTTTCAGATGAATCTGACCTATTGAA TTTGGATTGTTCATATAAAATTGTAAAAAAGATAAAGCCCTTGTACACCTGTTACAATTGTAAAC GTATTCTTCCTTGATCGATGTTTACGGTATAAATACAGGGCGATA Found at i:15629443 original size:16 final size:16 Alignment explanation
Indices: 15629424--15629455 Score: 50 Period size: 16 Copynumber: 2.0 Consensus size: 16 15629414 GATTCCAAAA 15629424 ATCCAAAAATCCAGAG 1 ATCCAAAAATCCAGAG * * 15629440 ATCCATAGATCCAGAG 1 ATCCAAAAATCCAGAG 15629456 TAAAGCAGCC Statistics Matches: 14, Mismatches: 2, Indels: 0 0.88 0.12 0.00 Matches are distributed among these distances: 16 14 1.00 ACGTcount: A:0.44, C:0.25, G:0.16, T:0.16 Consensus pattern (16 bp): ATCCAAAAATCCAGAG Left flanking sequence: Indices 15628924 -- 15629423 CATCTGACAATACATCGATGCTTTATACGCTTACCTTAAAGATCCTTAAACAATATGCTAATTAT TTATTGGCTATAAAGGAATTTAAACGCTGCTTGTGATGTATGCGATGTATGAACCCCTTTTCAAA CATTTTCATTGTTATTCGTATCTTTTTGTGCGTCAATTTCACTTCCTCAACGCCTTACTTACAAC TTTAATTTCTTTCGAACAAAGGCCTTTAAGAACACTAAAAAACACCTTCCGTGGGTAATCGACAG CACACTCCCCCCAGACAAAGGCCAAACCACCGAAACCCACCCAGTGCAGCGAACCACCCCCTTTT ATGGAGCGCTCCCCCTTCCATAACTGCGAAACACCCCACAAAAAACCCCCCCAATAGATGGGCAC ACGTTTTGTTGCAATCCCGATGAGGAAATGCTAATCCGCATGTAATATTCGAAAATGATATGAAA ATGCCAAACCAAACAACCACCCACCGGAGCAACCCGATTCCAAAA Right flanking sequence: Indices 15629456 -- 15629955 TAAAGCAGCCAGGCTGAACGGAACCAACATTACTCAATGTCAACATCAAAATTGCTTTGGAATTC ATGCATTCATTTATTTCGCCTTCAACAAAAAGGCAAACTAACGCAGTATAGAAATTTTCATTTTC GGCTGAGTTTTAATTCGGGGGAATCGGAATCTCCGGGGTCCTTAAATAGCTGAACAGCCGTTTGG GAATGAGAATGGGAACGGGAACGGGAACTTTCATGCTGATTAAAAGTGGCAACTGTGTCTACGGG GTTGCGATGCTTTTTTGAGTTTTTCGGTTTAGGTTTCGTGTTGCAACCTTTTTCCACTTGCCACC GAGGGTTGCCCCCGGACGCAACAGAAAGGGGATGACTCATCCTGCTCCTGGCTGCACTTGTCCTT TGCTATTAAACAGAAAAAATTTCGTCACAGACGGTGGCGTGAAATTTCGAAACGAATTCTCTAAA CTCGCTCATTGTAATTTCTGTAATACGCGAGTGCATGGGCATGAG Found at i:15631961 original size:12 final size:12 Alignment explanation
Indices: 15631937--15631963 Score: 40 Period size: 12 Copynumber: 2.2 Consensus size: 12 15631927 ACACTCTGGG * * 15631937 TTTTTTGTTTAT 1 TTTCTTGTGTAT 15631949 TTTCTTGTGTAT 1 TTTCTTGTGTAT 15631961 TTT 1 TTT 15631964 TTGGCTGCGG Statistics Matches: 13, Mismatches: 2, Indels: 0 0.87 0.13 0.00 Matches are distributed among these distances: 12 13 1.00 ACGTcount: A:0.07, C:0.04, G:0.11, T:0.78 Consensus pattern (12 bp): TTTCTTGTGTAT Left flanking sequence: Indices 15631437 -- 15631936 AAGTCCATAATGCGGTCGGTCAGCTCGTTGTATCCCTACATATACTATATATGTATGTCCTTAGT TCATCTGGCGCGCCTGAGTTATGCGACCATTGTTCCCATCGCCTTTCGGCCAGTGAATTATTATC CCTTTCGCATATGTTGCGGCCAGGCATTGTCCTTTGGCTGCCTCGCCACATATCCTTTCAAATGT CTGTTGCTCGGACACGCCTTGGAAATTGGGCGTTTTGCAGTTAAACGTCGTTGCTGCAAAGTTTT TGGGGCGTGTTCGCCTCATAAATTGATTTTTGTTTCTGTAGAAATTTGGTTTCCTTTATTTTTGG GTTTTTTGTAGATTTTCTTTGCCTCGAATTTCATAATTATCGGGGCGTGTGCGAGCACTCTGGAT ACGTTTATTCCTTTTACCCGGATCCTGCACTTGTTCAACTTGTTCGAGGAGATACAAAAATCAAT TTACCGCTTCGCCCTCCCCATCGATTGCCCGCCCAACACTCTGGG Right flanking sequence: Indices 15631964 -- 15632463 TTGGCTGCGGTCAATGTTCTTGGCCAGGCCAGCAGTTGTGGTCAACCAAGTGTTGGACAGCATTA TAAATATTTGAGCTTGCCCTTGCAGCTTACGGAAAACGAATGTCCGGAGCGGAGAAATTACTGCT GCAGTGCGTTGAATTGTTAAGGAATCTCGAGTGCTGAGCTTTGGCTCTTTTGCGGGTCGGTTGCT GATTTTATTTTCAACCATAAATCGTTGTAATGAAAAACTTGTTCAGACGCAGATTAAAGTTCATC GGGCACTCCATAGAAACTTTCAATTTATTGTGATAAGCTGACCCAGTTTTGGATTCATATTTTGA TACAAATTGGTTGCAACATATCCTGAAAGTCAAACTTTCTGGACCGCTTCAGATAACCACAATTA AATGGCAACATAATATTGGGCAATTCTCTTCCACTTAAAAGTTTAAACTCCCCTTTGTTCCGAAA TGGCTGGAAATTCAAATCTCGATTAGCCGAAATATCCTGTGGAGG Found at i:15635754 original size:11 final size:11 Alignment explanation
Indices: 15635734--15635755 Score: 37 Period size: 11 Copynumber: 2.0 Consensus size: 11 15635724 TACATTACGC * 15635734 TAAGTAAGAAA 1 TAAATAAGAAA 15635745 TAAATAAGAAA 1 TAAATAAGAAA 15635756 GACAATAAAG Statistics Matches: 10, Mismatches: 1, Indels: 0 0.91 0.09 0.00 Matches are distributed among these distances: 11 10 1.00 ACGTcount: A:0.68, C:0.00, G:0.14, T:0.18 Consensus pattern (11 bp): TAAATAAGAAA Left flanking sequence: Indices 15635234 -- 15635733 TAAATGCAGACACGCGTTCGGGCCACCAAAATCGTATGGTTCTCTAGCCTTTGGACTTGGACGAA CAGATGGAGCCGAAGTCTGCTGACCATTAATTCCGGCCAACTAAATGGTCAGCCGCAGTCTCCGT GGCCAAGTCGCAGCTTCTCCTTCAGCTTGTTAAACTAACAAGCCAGCATCGCGGTTCCAGGAAAG GCAATCATCTGTATACCGAGATAATGAAAACGAGCCAAATGAACGATTTTTAATTATACTTCTGA TGGCCTGGTAGCGATAAAGATCTGATCACATATCATGTAACGTTAGGAAAATCTCTGACATTCAA TGAGGGAATACGCATCTGCGGGATTAACTTTCTTCTTGGGATGCATAATTTCATAATTCAAATGG AATATATAAAGGTAAAAAGTCACCTGCGCACTGCTTGAGATCAACAAAACACTAAGCAAAAAGTT TGATTCTTACTTAATTTAAAAGAATACATTTGTATTACATTACGC Right flanking sequence: Indices 15635756 -- 15636255 GACAATAAAGACAATTAATTACTGAATAATATTAATGTAGAAACAATTTAAATAAATTTTTAAGC ATTCAAGGGCATAAACTATTTATATGATAAAATACAAGAATGTAATATTTAAATTTATATAACAT GGCTTCCATTTTGATTTAGTTCGATGTATCCTTTGTTAATAATAGCTAAGCTTTAAGTGTACTTT TTAAAATGGCTTAAAATCACTTAAAATTCCCATTTTCTCTTAGTGTACAATCGCGACCTGTGCTG CATTGCCCCTTGTCCTGATGATCATTGATCAATGATCGTGCCTCCTGCCGTCTGGCAGCTACCTG CGGCACTCGGGGCCACTTAGTGATTTTGGCCGTTGTTTGTTGACCTGGCCAAACAGCTGCCACTA CTTTTTTTTCGGGCCCAGACGACTCCACAAAATTGATGACGACAGGTTGCCAGGGCAAAAATAAA AATGGTAAAGAACGATCGCAGAGGGCTGATCCCTTGGAACAGGGA Found at i:15635757 original size:15 final size:16 Alignment explanation
Indices: 15635734--15635764 Score: 48 Period size: 15 Copynumber: 2.0 Consensus size: 16 15635724 TACATTACGC * 15635734 TAAGTAAGA-AATAAA 1 TAAGAAAGACAATAAA 15635749 TAAGAAAGACAATAAA 1 TAAGAAAGACAATAAA 15635765 GACAATTAAT Statistics Matches: 14, Mismatches: 1, Indels: 1 0.88 0.06 0.06 Matches are distributed among these distances: 15 8 0.57 16 6 0.43 ACGTcount: A:0.68, C:0.03, G:0.13, T:0.16 Consensus pattern (16 bp): TAAGAAAGACAATAAA Left flanking sequence: Indices 15635234 -- 15635733 TAAATGCAGACACGCGTTCGGGCCACCAAAATCGTATGGTTCTCTAGCCTTTGGACTTGGACGAA CAGATGGAGCCGAAGTCTGCTGACCATTAATTCCGGCCAACTAAATGGTCAGCCGCAGTCTCCGT GGCCAAGTCGCAGCTTCTCCTTCAGCTTGTTAAACTAACAAGCCAGCATCGCGGTTCCAGGAAAG GCAATCATCTGTATACCGAGATAATGAAAACGAGCCAAATGAACGATTTTTAATTATACTTCTGA TGGCCTGGTAGCGATAAAGATCTGATCACATATCATGTAACGTTAGGAAAATCTCTGACATTCAA TGAGGGAATACGCATCTGCGGGATTAACTTTCTTCTTGGGATGCATAATTTCATAATTCAAATGG AATATATAAAGGTAAAAAGTCACCTGCGCACTGCTTGAGATCAACAAAACACTAAGCAAAAAGTT TGATTCTTACTTAATTTAAAAGAATACATTTGTATTACATTACGC Right flanking sequence: Indices 15635765 -- 15636264 GACAATTAATTACTGAATAATATTAATGTAGAAACAATTTAAATAAATTTTTAAGCATTCAAGGG CATAAACTATTTATATGATAAAATACAAGAATGTAATATTTAAATTTATATAACATGGCTTCCAT TTTGATTTAGTTCGATGTATCCTTTGTTAATAATAGCTAAGCTTTAAGTGTACTTTTTAAAATGG CTTAAAATCACTTAAAATTCCCATTTTCTCTTAGTGTACAATCGCGACCTGTGCTGCATTGCCCC TTGTCCTGATGATCATTGATCAATGATCGTGCCTCCTGCCGTCTGGCAGCTACCTGCGGCACTCG GGGCCACTTAGTGATTTTGGCCGTTGTTTGTTGACCTGGCCAAACAGCTGCCACTACTTTTTTTT CGGGCCCAGACGACTCCACAAAATTGATGACGACAGGTTGCCAGGGCAAAAATAAAAATGGTAAA GAACGATCGCAGAGGGCTGATCCCTTGGAACAGGGATTGGGATTC Found at i:15636769 original size:13 final size:14 Alignment explanation
Indices: 15636753--15636784 Score: 43 Period size: 13 Copynumber: 2.4 Consensus size: 14 15636743 GGTTGGCTGG * * 15636753 GTTTTTGGTT-TGT 1 GTTTTCGGTTAGGT 15636766 GTTTTCGGTTAGGT 1 GTTTTCGGTTAGGT 15636780 GTTTT 1 GTTTT 15636785 ACCACTTGCC Statistics Matches: 16, Mismatches: 2, Indels: 1 0.84 0.11 0.05 Matches are distributed among these distances: 13 9 0.56 14 7 0.44 ACGTcount: A:0.03, C:0.03, G:0.31, T:0.62 Consensus pattern (14 bp): GTTTTCGGTTAGGT Left flanking sequence: Indices 15636253 -- 15636752 GGATTGGGATTCGAAAAGTCAGGATCGTCTGCTGATCTGACGTTAATCGACTAAATTGTAGCAGC TGAACTGTCAGTTTAGTTAAGTGGGCTGTGCCTCAACGGCGAAGGATACTTTTGGCGTGATATAT TACTGGCCAACATATCGATGACGAGTTGGCGATAAAGTCCTTCCTGCCCAGTCTAGATGTATATT CCGTGTCGCGCCTGCTCTCATTAGGTCCTTGATTAATGATAGTTCTGCTCTCGTTTGGGGCTTTA TTGTCGCGCCTTTTGGCCAACGCAATTTTATTGCCTTCAATTTTGCAGTATCTATAGTGTCGCCG TCTTCATCGTTGCCCCAACTTCATCATCAGATTCTCGCTCTTTTCGGTTTCTTGTTCCTCGTCGC GTAATTAGTCTCGTTTGTTGTCATAAATTTTCAGTAAATTTTGTTGAAAAGTCGCATTTAATTGC ACTGATTTACAGTTTTGTGTTTTTGCAGCTTGGTTGGTTGGCTGG Right flanking sequence: Indices 15636785 -- 15637284 ACCACTTGCCTCACATAATTACGTGCAAAATTAATGATGCTTGTGGCTGGGCTATGTGTAGCACT TTAAGCAGCGGAAGACAAATATTTCGGCCTTAGTTTTTATGATGTTTTCTTTTTTTGAGTCTGCT TTTTTTCCAGCCTTTCAAGCAGATCGTTAGCCAAATTTAATGAATTCAGCAGGTGCAATTTGATA ATTCCATGTGAGAAGGATGTTGTCTGACTGCGATCCTGCGGTTAGAATGTGTAATGATGCTGAGA ATGAAAGCAGAGCAGCAAGGTGCAACTCGGATTGATGGATGCGGTGTCCTCTTGACCGTAAATTA TCGTTAGACACAATTTGTGGTCCATAATTTGGATTGGATATGTGAAGCTTTGGCAGACTAATTTA TTGAGATTGCCTTGCAAAATTGTAGAATTTATTTCAGTTAAATAGAAACCTCGGACTTCGTCTTT CCTTTCAATTTTCTCTTTGTTTCTTAATAGAATGTGCTCAGCGAA Found at i:15639400 original size:11 final size:11 Alignment explanation
Indices: 15639384--15639405 Score: 37 Period size: 11 Copynumber: 2.0 Consensus size: 11 15639374 GTTCAGCTGG * 15639384 ATGATATGTCA 1 ATGATATATCA 15639395 ATGATATATCA 1 ATGATATATCA 15639406 GGAAGTTAGG Statistics Matches: 10, Mismatches: 1, Indels: 0 0.91 0.09 0.00 Matches are distributed among these distances: 11 10 1.00 ACGTcount: A:0.41, C:0.09, G:0.14, T:0.36 Consensus pattern (11 bp): ATGATATATCA Left flanking sequence: Indices 15638884 -- 15639383 AGTCAAACTCGGACTCAGAGTGCTCCGGCTCCTTCAACGGATTGTGACAAACGTCCCGGGGGTGC AATATATTCCACAGACTGTAATGAAAGTGTGAATGAAATGCTCCATGGCCCTCTGTTCGGTGCGG TACTCCTTTTGCCAGCACAAAAACGGATGTAGAAAGTTCAAATAGAATTTAACCCCAAGCGCATA TTTATACCCATGTTTCCCACACCTCGACGACGCTTTCACACTTTCAGCGTAAAACAAATACCAAA TGAGACAAGTGTGTGCGGGTGGGTTAAGTGTGCGGTGCCGGGGAATCCCCTCCTTTTTCACCACA TTAAACCCTTCTTTGGCTTGCTGAAAATGACCCAAGGTAAGAGGAGATTTCCTCGGTGGCTTTGC ATGCAGGTGAAAAGCGGATTCAGCTTGCCAGCTACCTCTATATACTTATTTTTTGTGTGTGTGTC TGCTGAAGGTTGTTAGCCCGGGGCCAGATGCGAAAGTTCAGCTGG Right flanking sequence: Indices 15639406 -- 15639905 GGAAGTTAGGGAAAGTTGGGCCATTGCTGCAGCTTAAATTCGCTTCAACTGAGAAGTGATCACTT ACCAAAGCATGTTGAAAGCCGGTTGTGGAAAATTCAAACGAAAATACATTATTTATAACTTTACA GACTAATATGATAGCATAGCCAGGAGCTTATACTTTGCCTAATTGGTCAAATGCACGGGGAAGTC TTTGAATAAGAAGTATTTCTTAGATGCAATAATTTTTATAATATATATTTACAATTAATTGTATT AATATTCTCTACGGTCCAAATACCCAGAGTTCACGTACAATTTGCCAAATTTCCATTTTCCTTGT CTCCTTCTCGGCTAAGCGCCTTCATGTTAATTAATTTTCCTGTCTAACTTTTCAATTCCAAAACG CGGTTGTCCACATCCTAGTCACTTTGAGTTCAGCCCCCGCCCCGCCCCCTCCTTGAATGACAGAT CACCGAAACCACTTGAGCCATATAGAGCCTGTCAGCTGAACTCAA Found at i:15644736 original size:17 final size:18 Alignment explanation
Indices: 15644714--15644759 Score: 69 Period size: 19 Copynumber: 2.6 Consensus size: 18 15644704 CCACCGTAAT 15644714 CTTATCCTTA-TAATATC 1 CTTATCCTTACTAATATC * 15644731 CTTATCCTTATCTTATATC 1 CTTATCCTTA-CTAATATC 15644750 CTTATCCTTA 1 CTTATCCTTA 15644760 GTGGATTTAC Statistics Matches: 26, Mismatches: 1, Indels: 2 0.90 0.03 0.07 Matches are distributed among these distances: 17 10 0.38 19 16 0.62 ACGTcount: A:0.24, C:0.26, G:0.00, T:0.50 Consensus pattern (18 bp): CTTATCCTTACTAATATC Left flanking sequence: Indices 15644214 -- 15644713 AGGGTGTCGAACTATAAATTGTACCTTTTGTTGCAGTTTTTGCCTGAATATCTTGAAGATTCGGG GGAATGGGACCTTCGACGCTGGCAACCCTCGACGTGCGATGTCTTTAATAAATGTTTGGATGTTT CGTTGCGAGATTAAGTGGATTCCGTTTATGGCATGAGTAATGATGGATGCATAATGTGCACGTAT GTGACAGGTGTGGGGTGTGGGAACTCTGTAGTGGCTGCGGTTTGCTGGGATAAATAATGGGTGGA GGAAGTACCGGGCTTAGGAAATATAATGTATTTATCTTTGATAATTTGGAATTTTTTGTTTGAAA AATATTTTTGTTTTTAGCTATTTCTAAATTATTTTTTCTGAGTATACACAGCTAGAAAAACCCAC AAAACAAACAACCTTATTTAATACAAAAAGTATTTGGTCGAAGTTCTAACAAACTTCCATGGCTC AATATGGTATTTTGATTAACAGAAAATAGTTTGGACCACCGTAAT Right flanking sequence: Indices 15644760 -- 15645259 GTGGATTTACCTTAAAGGGCTTTAATATATAGATTTTCAATGAACTATGATTTTTAATAATGAAT ATTGATGAGATTGAGATATTTCTAGTGTATGAACGAAAACTTCATTCTCGTATAAGTAAGTGTAC CACTTTCAATTAATATGTTACGCTTTAAAATAACCATGCAGTATGCATAATGCCATTTCGCCTAT TAAGTAATCAGTTGTTTCATAGACATGGAAGTTTTCGCGTCAGTTTTAAATTGCTGTTTTAAATA CATTGTTTTACCCGTGTGGATATTTATTGTACTCCTGCTGCTGCACAGAGATCTGAGCAGTTGGG ATGGCCTGATGGGACCACTTTCTCATCCAGGATTGGGCGAAAATGGATCTGCCTCATATTTAAGT GTTCCATCTTGGGAAATCGATGAGTATACGCAGGGTTGGCGGTATTACTTATATAACTCTTGGCT GGCGGAGAGAATTCCTCTAAGACGTTCTTTGCCAGACTTACGTGA Found at i:15649871 original size:11 final size:11 Alignment explanation
Indices: 15649857--15649879 Score: 39 Period size: 11 Copynumber: 2.1 Consensus size: 11 15649847 GAGAATAAAT 15649857 TATTATTAATA 1 TATTATTAATA * 15649868 TATTATTTATA 1 TATTATTAATA 15649879 T 1 T 15649880 TACTTATTAT Statistics Matches: 11, Mismatches: 1, Indels: 0 0.92 0.08 0.00 Matches are distributed among these distances: 11 11 1.00 ACGTcount: A:0.39, C:0.00, G:0.00, T:0.61 Consensus pattern (11 bp): TATTATTAATA Left flanking sequence: Indices 15649357 -- 15649856 ACAACTTCTCGCTTGGAGCGTGACATAAGAGATCTGCAAGCGGTCTTCGAGTCGGAGGTCATACC GGATCTGGGAGCTTTGGGTCGCCCGGCAAGGGGTAATTGGACTGAGGAGCAGCTGGAGGCCATCG CCAAAAGTCAGCGGGAAACGGGTTACAATGCTTGGCTCTCCAAGCGCATCTCACCTGAGCGATCG CTCTACGATATGCGACATCGCAGGTGAGTGGCGAGAGAATAAGCTTCAAGAGCTTGCAGAGCGAA AATCGGTAGCAATATAAGAGTGGCATTCGATTTAGTACTGCCGGCGCTTTGAAGATACATTTCTC AATCAAACACATTTCATATCTAGTTCATGCAAATTTCAGATTCATAAATTTAATAGAAATTACAT TTTTAATCATATTAGAAAGCGATATAACTGGACACACTTTATATCTTAGTATATTTATAAAAACA ACTAATATTTTCTTTAGTCATATTTACAATATTAAGAGAATAAAT Right flanking sequence: Indices 15649880 -- 15650379 TACTTATTATTTAAAGTACTTATGGTTAGGATCCTATACGCGCTTTACTTCGTAGTTTGTTCATT TAAATAGCTAACTAGTCATCACTGTTAATATGATAAGACTCTCTGAATGTTGCGATCTTTCCACA GCTGCAAAAAGCTCAAGTACCCGATGGAAAAGCTCCCATCAGTCAGTGTGGTGATAACGTATCAC AATGAGGAGGCAAGCGTGCTGCTTCGAACGCTTAGCAGCTTGAGGAGCCGAACTCCGATCCAGCT GCTTCGAGAGGTTATCCTGGTGGACGACGGGAGCACCCAAGCGGACGAGAAGCTCAACGACTTCA TTAAGATCAAGTTTCTAAATATGGTGCAGCACCGCAGGATCACAACCCAGGTGGGTCTGATGCAT GCGAGAGTCGTGGGCGCGGAACTCGCCCTGGCCGATGTCCTCGTCTTCCTAGACTCCCACGTGGA AGTCACCAAAGGCTGGCTGGAGCCGCTCATTGCTCCCATTTTAGA Found at i:15649889 original size:16 final size:16 Alignment explanation
Indices: 15649868--15649902 Score: 56 Period size: 16 Copynumber: 2.2 Consensus size: 16 15649858 ATTATTAATA * * 15649868 TATTATTTATATTACT 1 TATTATTTAAAGTACT 15649884 TATTATTTAAAGTACT 1 TATTATTTAAAGTACT 15649900 TAT 1 TAT 15649903 GGTTAGGATC Statistics Matches: 17, Mismatches: 2, Indels: 0 0.89 0.11 0.00 Matches are distributed among these distances: 16 17 1.00 ACGTcount: A:0.34, C:0.06, G:0.03, T:0.57 Consensus pattern (16 bp): TATTATTTAAAGTACT Left flanking sequence: Indices 15649368 -- 15649867 CTTGGAGCGTGACATAAGAGATCTGCAAGCGGTCTTCGAGTCGGAGGTCATACCGGATCTGGGAG CTTTGGGTCGCCCGGCAAGGGGTAATTGGACTGAGGAGCAGCTGGAGGCCATCGCCAAAAGTCAG CGGGAAACGGGTTACAATGCTTGGCTCTCCAAGCGCATCTCACCTGAGCGATCGCTCTACGATAT GCGACATCGCAGGTGAGTGGCGAGAGAATAAGCTTCAAGAGCTTGCAGAGCGAAAATCGGTAGCA ATATAAGAGTGGCATTCGATTTAGTACTGCCGGCGCTTTGAAGATACATTTCTCAATCAAACACA TTTCATATCTAGTTCATGCAAATTTCAGATTCATAAATTTAATAGAAATTACATTTTTAATCATA TTAGAAAGCGATATAACTGGACACACTTTATATCTTAGTATATTTATAAAAACAACTAATATTTT CTTTAGTCATATTTACAATATTAAGAGAATAAATTATTATTAATA Right flanking sequence: Indices 15649903 -- 15650402 GGTTAGGATCCTATACGCGCTTTACTTCGTAGTTTGTTCATTTAAATAGCTAACTAGTCATCACT GTTAATATGATAAGACTCTCTGAATGTTGCGATCTTTCCACAGCTGCAAAAAGCTCAAGTACCCG ATGGAAAAGCTCCCATCAGTCAGTGTGGTGATAACGTATCACAATGAGGAGGCAAGCGTGCTGCT TCGAACGCTTAGCAGCTTGAGGAGCCGAACTCCGATCCAGCTGCTTCGAGAGGTTATCCTGGTGG ACGACGGGAGCACCCAAGCGGACGAGAAGCTCAACGACTTCATTAAGATCAAGTTTCTAAATATG GTGCAGCACCGCAGGATCACAACCCAGGTGGGTCTGATGCATGCGAGAGTCGTGGGCGCGGAACT CGCCCTGGCCGATGTCCTCGTCTTCCTAGACTCCCACGTGGAAGTCACCAAAGGCTGGCTGGAGC CGCTCATTGCTCCCATTTTAGAGGACAACAGGACCTGCACTACTC Found at i:15657652 original size:43 final size:42 Alignment explanation
Indices: 15657574--15657656 Score: 106 Period size: 43 Copynumber: 2.0 Consensus size: 42 15657564 TTTTTTTAGT * * 15657574 GCGCAAAAAATGAACTTCATTTATGTGGCCGTTTAAATTTTTG 1 GCGAAAAAAATAAACTTCATTTATGTGGCCGTTT-AATTTTTG * * * 15657617 GCGAAAAAAATAATCTTGATTT-TGTGGTCGTTTTAATTTT 1 GCGAAAAAAATAAACTTCATTTATGTGGCCG-TTTAATTTT 15657657 ATTAAGTGAA Statistics Matches: 34, Mismatches: 5, Indels: 3 0.81 0.12 0.07 Matches are distributed among these distances: 42 13 0.38 43 21 0.62 ACGTcount: A:0.30, C:0.11, G:0.18, T:0.41 Consensus pattern (42 bp): GCGAAAAAAATAAACTTCATTTATGTGGCCGTTTAATTTTTG Left flanking sequence: Indices 15657074 -- 15657573 AGCAAAACATTGCAGTGTTTTCCCCAGGTGCGTTTCACGTATTTGGCAGTGTCTGGACTATTATA ATTATAGGGTATCATGCAAAGAATCCGGATTTCTTCGTACAGGGGATCCAAAGTGTGCTGGTTAC TTCGTTTGGCAGGTTTTCTATCAACTTCGCTAACATTAATATAGAGTGTGAGAATCAAAAACAAA ATTAAAGCCAGAAAAAGGCCATAATAGACGCGTCTAGGTGAAGTCATGGCTTTAAACTGACTATT ATTAAAGTTTGATCACATGAATGGGAAAACTCAATATAAGATAAGACAGTTATCAGTCTGCAGAA ATAATTTAACCCACTGAATTTTCGGGGGTCGATGTGCACTCATGCTTGGTATTTAAAAACGGACG GAAGCTATCAAACTATTTTGTTTACGGTTAAGTGGTTTTTAGCAAAATAGGAAGATAAGTGCTAT GGCTAAACAGTTCCTATAATTAAACATTGATTCGTTTTTTTTAGT Right flanking sequence: Indices 15657657 -- 15658156 ATTAAGTGAAACAGAATTGGTGAATGGTTTCGCGATTGCATCTACAATTTGAATAGTTAATTAAA ATATTTATTTAGCCCGCAAAGTGTTAACTCGATTCGCTGGGCCAACATTTTTGATAAGATTAGCG AGCTTTGATTGCATTTTAGTAATCCAATCAGGGAAGGGGGGCCAATTGTGTGGTTAGCGGTGCAG ATAACGAAGTAACCATGGTTACCAATCCAATTATCAAACGATTTGGCAAGCAATTCGATGGCTTC TAGATCAATGCTTTTAAATAATTCTTATCACTGCAAATGGCCGCAATTAAAGTGTAATAGGAAAA GGGGTTATAAAATGTAAATGGCTGTCCCTCTCCCTTCGTCATCGCTAAGTTTTAGTGCATTTCCG TTGAAAGCAGATGAGTACCAAAATAAAAGAAGATCCAACAACCTGCTGCTTCGAATCTCGTGCGA GCCAAACAAACATTAAGTTACAAAATAAAATCTTTGGCCCATAAA Found at i:15658714 original size:13 final size:12 Alignment explanation
Indices: 15658687--15658713 Score: 47 Period size: 12 Copynumber: 2.2 Consensus size: 12 15658677 AAAAATATAC * 15658687 TTTCTTTACTTT 1 TTTCTGTACTTT 15658699 TTTCTGTACTTT 1 TTTCTGTACTTT 15658711 TTT 1 TTT 15658714 TTAATAAGCT Statistics Matches: 14, Mismatches: 1, Indels: 0 0.93 0.07 0.00 Matches are distributed among these distances: 12 14 1.00 ACGTcount: A:0.07, C:0.15, G:0.04, T:0.74 Consensus pattern (12 bp): TTTCTGTACTTT Left flanking sequence: Indices 15658187 -- 15658686 CAAAGACGGAAAAAGAAAAACAATTTGTTGTTGGTTGGAGGATGAAGGGAAAACAGGCTAATCTC ATGGCGCGAGCTTATCAGGAAAACAAACCTGCAGCAACCTACTTTATATGTATCTGTATCTTTGT CTGCATCTCCATCTGCATCTGTAACCGCTGTGGCTGGCTGCTGCGAGCTCCCAATCCGCGACCCA ATCCCATTTCTACACGGAGAAAAAAAAATTGAAAATTATATAATTATTTAAGCCATGCGTTTCTG CTCGCTTAACATTCCTTTCATAAATTGCTATTTAAGGCAATTAAATTGCATAAAAAGCTTGTATT TATTTCGTATTAGATTAAACGTGGGACTAAACTTTTTTGCTGTTCAATATTTAAATATTTCTATA TTACAAATATAAACTTAAAACACACATTGCAATGTGTACAATACATTGGTAAACGCATATAAAAT TCTAAAAACTTCCAATACATTTTTTAACTAATAGTAAAAATATAC Right flanking sequence: Indices 15658714 -- 15659213 TTAATAAGCTCAAGTTATTTATGTTTCTAGTGAACAGCACAGTAATTTCTTGCAACATTTTTTCA CAGTGCGTTTTCAATCCCATTCCGAGTCCCAAATCCAATCTGATCCGATCCCCCACTGCTGCACT TTGATGTTCCTCTGATGGAAGCGCCCAAGATAGGAACAGTTAGCGCATCGCAGTTAACTCGTTCG GCGGAGTTTTCCTGTTGGGTTTTTATGAGCTGGGTTCAGGTCTGGAGTATCTTGCAGCGCGCCCA TAACTTTGAATCGGACAACTTTTATTTGCATTTTTATTTGTTTTTCTTTTAGTCAGGCTTCTCGG AACGCTCCAACTTTTTTTTATATATATTTTCATGGAGATAGAATTTAATTTTGCTTTTGTTTGGC AACGCAATCGAGGTAAATATTTCACTTGAATTAAGCATAACTTTTCTGCTGCCAATATACAAATT TGAAGTGCACAGATTGTTATATTGCTGAGTTTTTGGAGCGTAGAA Found at i:15660784 original size:12 final size:12 Alignment explanation
Indices: 15660754--15660778 Score: 36 Period size: 12 Copynumber: 2.1 Consensus size: 12 15660744 TCGCTGCCTC * * 15660754 TCCGATTCGGAT 1 TCCCATTCGAAT 15660766 TCCCATTCGAAT 1 TCCCATTCGAAT 15660778 T 1 T 15660779 TGCATTTCGA Statistics Matches: 11, Mismatches: 2, Indels: 0 0.85 0.15 0.00 Matches are distributed among these distances: 12 11 1.00 ACGTcount: A:0.20, C:0.28, G:0.16, T:0.36 Consensus pattern (12 bp): TCCCATTCGAAT Left flanking sequence: Indices 15660254 -- 15660753 CTAGAGACAGCGGGCTTGCCAATTTTAATTTTGGCTTTTGTTTTGGTTTCGGTTTTAGCCGCCTG CACAATAAAGTGGGTCAAATATTGCGTATGACGTTGCCTTTTAGCCAGCGGCTGTTGGCCAACCG GTTTCGCTTTCAAACATCGGCGGCGATTCGTCTGAGTTGGGAGTTAGTCGATTGGAGCCACTATG GTTTGGGTATGGGTATGGGTATGGGAATGGGTATGGTTATCTTCCAGCTTCCACTTCCAGCTTAA AATTTAACTTCGGCTTGGGCCACGATTTTGGCGCTTAATTGAAAATTCAGTTGGCCAAGTCGACG TGTGTTGTTCGGGTGGCCATAAACGTGGGCTAATGTGCATTTTATTAATAAATTGTCTGCTTCAT TAGGCTGTACCCTCTGCCCCAGCAACCTGCAACTTTCACCGATCGGAAAGATGCATCCGATGGAT GGGCTTTTAATAAATTGCCCTTTAGTTGCGCTTTCTCGCTGCCTC Right flanking sequence: Indices 15660779 -- 15661278 TGCATTTCGAGCTAATTATGTTGTTTATGTTGTATAATATTTTGATGTGCCTTGTGCGATCTACA CATGTTTTCGTGGCAGCAGCCGTTAAAACCGGCAATGCAAATGCAAATCGAAAAATAAAACTCAA AATAAAAAAAATAATGGACATGCTGTCTGGAGCCAAGGTGAAAGCATAGACAAATTGCCACATTT TGCAGGCCGGCAACTGGCGAATTTTTGCTTCATAACCGATTGGGCTTTAACCCATTAGCTACGCA ATTAGCGAGGCTAACATAAAAACCGATACTAAAACTCATTAGCAACAATTTCAGGTATTCACTGG AACTGTTTGTTTTATGCCCCGTAATGGCAGTGATGAAATTATATGGCTCGCTGTAATAAGTAGCT GAACTACGAACAATTGAATAATCCAGAATAGTTCTCCTAACCAGTAGAGCCAACACTTCTGGCTT TCTTTCTAGCCTGATAGCTTTCAATATGGTCAATAGAACGTGAGT Found at i:15662191 original size:11 final size:11 Alignment explanation
Indices: 15662172--15662203 Score: 43 Period size: 11 Copynumber: 2.9 Consensus size: 11 15662162 TGTAGCGTAG * 15662172 AATAAAAATAA 1 AATAGAAATAA 15662183 AATAGAAATAA 1 AATAGAAATAA * * 15662194 ATTTGAAATA 1 AATAGAAATA 15662204 CCTCTTACTC Statistics Matches: 18, Mismatches: 3, Indels: 0 0.86 0.14 0.00 Matches are distributed among these distances: 11 18 1.00 ACGTcount: A:0.69, C:0.00, G:0.06, T:0.25 Consensus pattern (11 bp): AATAGAAATAA Left flanking sequence: Indices 15661672 -- 15662171 ACCGATATGCAAATGCCACCGCAAGAGGTTCTTCCCCAGAACTTGGCCCATTTCATTGACCGCTG ATCACGGACCTGTGATCACCAATCACGGATTGTGAATCACGGCTTGCGAGATAAATAACTTTTAT TGCACTCGCATAAATGCAATTTATTCGCACCCTCACATGTGGATTTCTAGTTGGTTGTCGGTGAT TTGTTTACCCATTCAAATGGGTATAACAATAATGAAGCACGGAAACGGACGGCGACTGCAAGTGC AACTGCAACCGGCAATCTATAAATACAACAATAACGATAATAATAATAATGATAAATAAAAATCA CATGGCGGTTAAGAGCGACAAATCCATTGCACAGTGAGATAAATTTCCATAGAATTCATTCCATT TGTTAATGTCGATAGCGGGCTGTTCAGATTGCAGATAGCGCGGTGATACTAACTTAGTTGCAATA ATGTTTCCCAACTCAGCTGTTGGAATGCGGGACCGTGTAGCGTAG Right flanking sequence: Indices 15662204 -- 15662703 CCTCTTACTCTTAAAGATAGAGCGATAGAACCCAAGACCTACCACAATTCGCATTGCCTTCGGAA GCGTCCACGTTTTCCAGCACGGGGTTAACTGGGAGTCACGTCCACCGACTTAGCATCGATGCTAG GAAAACAGTGTTTGAGATCATTTATTATGTCTATTGTCTCTGCCAGCGATTTGCATACCTATACA TGGGTTTACTAGCTTATCAATGCGAAATTACAATTGCACAAAAGCATTGAGCGCACTGCAAGCAC CGGCAGTCGAATAAGCTATCACGTCCTTAGCTCAATGTCAAATCGAACTGTCTCTATCTGTCTAT CTATCCATCTATCTATCTATCTACGACAACTATCTCAATCTGCCGGATTGTTGATGTTGTGCTCC GGCATCCGAAGCTGGAAGCTATTTACAAAGCTCAGTGGAAGTGGGGAGTGGCACCGCCTGGCGAA AGGATTTGTATGCCATCTGTTCCTGGCGTCAATCAAATCAGTTGC Found at i:15663491 original size:16 final size:16 Alignment explanation
Indices: 15663467--15663504 Score: 55 Period size: 16 Copynumber: 2.4 Consensus size: 16 15663457 TGGAGGTGCT * 15663467 GATGTTGCAACTCCTG 1 GATGCTGCAACTCCTG * 15663483 GATGCTGCAGCTCCTG 1 GATGCTGCAACTCCTG * 15663499 GCTGCT 1 GATGCT 15663505 CCTCTCCTGC Statistics Matches: 19, Mismatches: 3, Indels: 0 0.86 0.14 0.00 Matches are distributed among these distances: 16 19 1.00 ACGTcount: A:0.13, C:0.29, G:0.29, T:0.29 Consensus pattern (16 bp): GATGCTGCAACTCCTG Left flanking sequence: Indices 15662967 -- 15663466 TGGCGAAACTATTCAGCTAACACATTTAGTAGCGAGTAGTATGTTTAGTTACGTCTTTTTGATAA TCACAGCGCTTAGTTTAATTACATATGGGTATGTCTTTCCAGCATGAACATGAAAATATCACAGA GCTCAGTTGCTTGGCTAGGTATTCGTATTCGTATTCTCGTCACTTTTACCTTTACCGCTTGATAT CGTCTTTCGACTGGCTGTCTTTTGACTTCGATTTCTTTTTCTCGTCGACGGTTTTGTACGAGCTG CCGAATACCTCCGCATAACTGGGCACAATTGGCATCATCACAAAGTTTGGCTTAATCGACTCGCA CGTGGGCGAAGCTGCCAATGTTGCAGATGTTGCTGTTGCTGCTGTTACTGCTGTTACTGTTGCTG CTGCATGTGTTGCTGCTGCTGCTGTTGTTGCTGGGAGCAGCGGCATTGTGGCATCACAAAACGAA GGTGTCTGCGGTGCCAGGTGATTCTCGGGTGCGGCTGGAGGTGCT Right flanking sequence: Indices 15663505 -- 15664004 CCTCTCCTGCTTATTGAACACATTGAACACACTCGGATAGACAATCAGGCAGGATGACTGCGGGG ATTTTTGTAGCAGCTCCAGAGCCGCCTCGTAGCTGGGCAATCCAGATACTAGGGTGTATTCCGGA ACCGGATCCTCCACATCCGGATGCAGTTTCAACGCCTCTATATCTACAATGGTGCACTGCGTCGA GCCATTTGCATTGTTGCGATCTGCAAAACAAAGAACAATAATTGTTTATTAGTATTTGCCTTCGT TGGATTGGAGTTGACTGGGCGAGATTAATGAAGACCTCGACCCAGTTGCAATATTACAATTGCTT CTGCCCGCATTTGTTTTGCCCTATTTGCTGGCTTTCATTTCCATTAACTTTTTAAATATTTTCTC TTCGCTGCATTCTTTTTCATAATTGCCTTGGCACCGCTTTCGAATTAAACTCGAGGTAGACGAAT TTCTCTGAAATTTTTTGCCGCACTTTTCTGCCATTTCGTTGGCGA Found at i:15677955 original size:11 final size:11 Alignment explanation
Indices: 15677939--15677960 Score: 37 Period size: 11 Copynumber: 2.0 Consensus size: 11 15677929 ATCTGGTATA 15677939 TGCGAAATTTT 1 TGCGAAATTTT * 15677950 TGCGAATTTTT 1 TGCGAAATTTT 15677961 AATATTTAAT Statistics Matches: 10, Mismatches: 1, Indels: 0 0.91 0.09 0.00 Matches are distributed among these distances: 11 10 1.00 ACGTcount: A:0.23, C:0.09, G:0.18, T:0.50 Consensus pattern (11 bp): TGCGAAATTTT Left flanking sequence: Indices 15677439 -- 15677938 ATTGTCAATCTATCTTCCAGTATCTGCAAGTATCTCCCACTACTCCTTCCCCGAATCTCAATCTG TATGGCCATAGCCTTGGCCTTTGTTGGCTGCCTGCTCTTTTCGCCATCTCCTGTTTGTTTTTGCA ATTGACAGTCGCTGGAGGCGAAGGCTGTAAGCGTGAGCATAATTATGGTTTTCAATTTATTCCTG GAATCCGCTCGCACACACAGCGTAGATGGGAGTTGGATAGGTTTCACTAGAATCCTACCTGATGT TAGCCTTTTAGCAAGAGTTCCTAATTGAAAGTGTCATAAATTAAGAATGAACTTCAAGTCAAGTC GAGTTCGGCTGCTGTTCCTGCTGCTCTGTGAAAATTTATGGAAATCTTGGGAAGCATCTGGAGTA AATTCGAAGTAACCCTCCATAGTTACCCTTTATATAATGAATTTTTCTTATTAAAACACAATTAC AAATTTGAATTAACAATTTACTAACTAAAAATAACATCTGGTATA Right flanking sequence: Indices 15677961 -- 15678460 AATATTTAATTAGATTTGTTAGGTGTTATTACAAAAAATTCCTTATTTATACAATGAGATATTGC ATTAAGAAGCTGATATTGTTATGCTCTGAACCTTTTAATCCCCACTTTCGCATCTAGTTCGACAA CTCATTCTCTATTCAACATGGTTTCCTGAATAAACAGAGAAGCAATTTCCTACATTATTTATTTA CTTTTAAGTAGTCACTCTAAATGCATTCATAATATCCTGCCTACCACCAAAAAACACGGCGCAAA AACTCAAATATCATGCTCTAAAAAGAATATCCTGCCATAAAAAGACAACACACAGCTAGAGGAAC TCATTCATAAATCAATGGATACAAGTATTGTTAATTTTCGATATATTTTTTTAGGAAGCCCGTGA AGTGTTTATTGGAAAAAATATGCTTCCTCACGGTTGTTTTTAGGATAAATATGTCAGAGGGAAAT ATGATAGCCTATAACTTCGTTGGCGGGACAGCTGGCCGATTGTAG Found at i:15677959 original size:10 final size:11 Alignment explanation
Indices: 15677939--15677960 Score: 37 Period size: 10 Copynumber: 2.1 Consensus size: 11 15677929 ATCTGGTATA 15677939 TGCGAAATTTT 1 TGCGAAATTTT 15677950 TGCG-AATTTT 1 TGCGAAATTTT 15677960 T 1 T 15677961 AATATTTAAT Statistics Matches: 11, Mismatches: 0, Indels: 1 0.92 0.00 0.08 Matches are distributed among these distances: 10 7 0.64 11 4 0.36 ACGTcount: A:0.23, C:0.09, G:0.18, T:0.50 Consensus pattern (11 bp): TGCGAAATTTT Left flanking sequence: Indices 15677439 -- 15677938 ATTGTCAATCTATCTTCCAGTATCTGCAAGTATCTCCCACTACTCCTTCCCCGAATCTCAATCTG TATGGCCATAGCCTTGGCCTTTGTTGGCTGCCTGCTCTTTTCGCCATCTCCTGTTTGTTTTTGCA ATTGACAGTCGCTGGAGGCGAAGGCTGTAAGCGTGAGCATAATTATGGTTTTCAATTTATTCCTG GAATCCGCTCGCACACACAGCGTAGATGGGAGTTGGATAGGTTTCACTAGAATCCTACCTGATGT TAGCCTTTTAGCAAGAGTTCCTAATTGAAAGTGTCATAAATTAAGAATGAACTTCAAGTCAAGTC GAGTTCGGCTGCTGTTCCTGCTGCTCTGTGAAAATTTATGGAAATCTTGGGAAGCATCTGGAGTA AATTCGAAGTAACCCTCCATAGTTACCCTTTATATAATGAATTTTTCTTATTAAAACACAATTAC AAATTTGAATTAACAATTTACTAACTAAAAATAACATCTGGTATA Right flanking sequence: Indices 15677961 -- 15678460 AATATTTAATTAGATTTGTTAGGTGTTATTACAAAAAATTCCTTATTTATACAATGAGATATTGC ATTAAGAAGCTGATATTGTTATGCTCTGAACCTTTTAATCCCCACTTTCGCATCTAGTTCGACAA CTCATTCTCTATTCAACATGGTTTCCTGAATAAACAGAGAAGCAATTTCCTACATTATTTATTTA CTTTTAAGTAGTCACTCTAAATGCATTCATAATATCCTGCCTACCACCAAAAAACACGGCGCAAA AACTCAAATATCATGCTCTAAAAAGAATATCCTGCCATAAAAAGACAACACACAGCTAGAGGAAC TCATTCATAAATCAATGGATACAAGTATTGTTAATTTTCGATATATTTTTTTAGGAAGCCCGTGA AGTGTTTATTGGAAAAAATATGCTTCCTCACGGTTGTTTTTAGGATAAATATGTCAGAGGGAAAT ATGATAGCCTATAACTTCGTTGGCGGGACAGCTGGCCGATTGTAG Found at i:15678251 original size:19 final size:19 Alignment explanation
Indices: 15678227--15678265 Score: 57 Period size: 19 Copynumber: 2.1 Consensus size: 19 15678217 CAAAAACTCA ** 15678227 AATATCATGCTCTAAAAAG 1 AATATCATGCCATAAAAAG * 15678246 AATATCCTGCCATAAAAAG 1 AATATCATGCCATAAAAAG 15678265 A 1 A 15678266 CAACACACAG Statistics Matches: 17, Mismatches: 3, Indels: 0 0.85 0.15 0.00 Matches are distributed among these distances: 19 17 1.00 ACGTcount: A:0.49, C:0.18, G:0.10, T:0.23 Consensus pattern (19 bp): AATATCATGCCATAAAAAG Left flanking sequence: Indices 15677727 -- 15678226 AAGTGTCATAAATTAAGAATGAACTTCAAGTCAAGTCGAGTTCGGCTGCTGTTCCTGCTGCTCTG TGAAAATTTATGGAAATCTTGGGAAGCATCTGGAGTAAATTCGAAGTAACCCTCCATAGTTACCC TTTATATAATGAATTTTTCTTATTAAAACACAATTACAAATTTGAATTAACAATTTACTAACTAA AAATAACATCTGGTATATGCGAAATTTTTGCGAATTTTTAATATTTAATTAGATTTGTTAGGTGT TATTACAAAAAATTCCTTATTTATACAATGAGATATTGCATTAAGAAGCTGATATTGTTATGCTC TGAACCTTTTAATCCCCACTTTCGCATCTAGTTCGACAACTCATTCTCTATTCAACATGGTTTCC TGAATAAACAGAGAAGCAATTTCCTACATTATTTATTTACTTTTAAGTAGTCACTCTAAATGCAT TCATAATATCCTGCCTACCACCAAAAAACACGGCGCAAAAACTCA Right flanking sequence: Indices 15678266 -- 15678765 CAACACACAGCTAGAGGAACTCATTCATAAATCAATGGATACAAGTATTGTTAATTTTCGATATA TTTTTTTAGGAAGCCCGTGAAGTGTTTATTGGAAAAAATATGCTTCCTCACGGTTGTTTTTAGGA TAAATATGTCAGAGGGAAATATGATAGCCTATAACTTCGTTGGCGGGACAGCTGGCCGATTGTAG TATCCTTTGGGCTTCCTGTGAGTGCACTTCTTTTTTTTATCTGAATCATTTGGGGAGCAATGTGA TTGATGACTCAAACTGGGAGAACTCACCTTTCCACAGCCATTTCCCAGCCATTCCAAGAGGACTC TCCTCGACTGTTTACGACTCTAATCTTGTTTCTGTGTAAAACAAAAACGTGACTCCATCGTTGAC CCCACGGAACTTAAGCTAATGTCTGAGTCACCGCTAACCAAAAATCGTTCCCGCATGCCCCAATA AAGTATAACCAATCCAACCTACCGCCCATAATTCCATGTTGCCAA Found at i:15678576 original size:11 final size:12 Alignment explanation
Indices: 15678554--15678578 Score: 43 Period size: 11 Copynumber: 2.2 Consensus size: 12 15678544 AGAACTCACC 15678554 TTTCCACAGCCA 1 TTTCCACAGCCA 15678566 TTTCC-CAGCCA 1 TTTCCACAGCCA 15678577 TT 1 TT 15678579 CCAAGAGGAC Statistics Matches: 13, Mismatches: 0, Indels: 1 0.93 0.00 0.07 Matches are distributed among these distances: 11 8 0.62 12 5 0.38 ACGTcount: A:0.20, C:0.40, G:0.08, T:0.32 Consensus pattern (12 bp): TTTCCACAGCCA Left flanking sequence: Indices 15678054 -- 15678553 AACCTTTTAATCCCCACTTTCGCATCTAGTTCGACAACTCATTCTCTATTCAACATGGTTTCCTG AATAAACAGAGAAGCAATTTCCTACATTATTTATTTACTTTTAAGTAGTCACTCTAAATGCATTC ATAATATCCTGCCTACCACCAAAAAACACGGCGCAAAAACTCAAATATCATGCTCTAAAAAGAAT ATCCTGCCATAAAAAGACAACACACAGCTAGAGGAACTCATTCATAAATCAATGGATACAAGTAT TGTTAATTTTCGATATATTTTTTTAGGAAGCCCGTGAAGTGTTTATTGGAAAAAATATGCTTCCT CACGGTTGTTTTTAGGATAAATATGTCAGAGGGAAATATGATAGCCTATAACTTCGTTGGCGGGA CAGCTGGCCGATTGTAGTATCCTTTGGGCTTCCTGTGAGTGCACTTCTTTTTTTTATCTGAATCA TTTGGGGAGCAATGTGATTGATGACTCAAACTGGGAGAACTCACC Right flanking sequence: Indices 15678579 -- 15679078 CCAAGAGGACTCTCCTCGACTGTTTACGACTCTAATCTTGTTTCTGTGTAAAACAAAAACGTGAC TCCATCGTTGACCCCACGGAACTTAAGCTAATGTCTGAGTCACCGCTAACCAAAAATCGTTCCCG CATGCCCCAATAAAGTATAACCAATCCAACCTACCGCCCATAATTCCATGTTGCCAATACCATGG TTAAGGAAAATCGAAAACGCACCACGAGAATTTTCACATTTTCACCTGAACGAATGAAGCGAAGT GGAAGAACTTGTTCGGGCCATAAATATCAATTAGCTAAGATAAAGATACTAAAGCGAGCCACAAG ACCACGAATCGGAAAATAAAACTAATTGCAGCTAGCCGGTGGTCCTTCCCGTCGCTCCACATACA TATATATGTACATACACGTATATGTTTCTGGCCAGACTTCGACTGGAAAGGAAGTCGTAAAATTG ATAAAGGCGCTGGACCAAGGAAAAACACTCCACTCCGATTATGAG Found at