TRAP (Tandem Repeats Analysis Program) TRF Version 4.00 Sequence: arm_3R assembled 2004-3-5 md5checksum:6b279651b3b268f11e0dd1d87ded0ccc Parameters: 2 5 7 80 10 25 1000 Pmatch=0.80,Pindel=0.10 tuple sizes 0,4,5,7 tuple distances 0, 29, 159, 1000 Length: 27905053 ACGTcount: A:0.29, C:0.21, G:0.21, T:0.28 Found at i: i:21225945 original size:21 final size:21 Alignment explanation
Indices: 21225915--21225962 Score: 61 Period size: 21 Copynumber: 2.3 Consensus size: 21 21225905 CACGGAGTTT * * * 21225915 GCGTTGTGGTCTTAGTACAAG 1 GCGGTGTGGTCGTAGCACAAG * 21225936 GCGGTGTGGTGGTAGCACAAG 1 GCGGTGTGGTCGTAGCACAAG * 21225957 GTGGTG 1 GCGGTG 21225963 GAGTTGTTGT Statistics Matches: 22, Mismatches: 5, Indels: 0 0.81 0.19 0.00 Matches are distributed among these distances: 21 22 1.00 ACGTcount: A:0.17, C:0.12, G:0.44, T:0.27 Consensus pattern (21 bp): GCGGTGTGGTCGTAGCACAAG Left flanking sequence: Indices 21225415 -- 21225914 AGTTGTTGTAGTTGTAGTGGTTGTAGTCGTTGTGGTGGTTGTGGTAGTCGTGGTTGTCGTAGTTG TTGGGGTACAAGTTGTAGTCGTTGTGGTGGTTGTAGTCGTGGTGGTGGTTGTGGTTGTGGTAGTC GTGGTTGTCGTAGTTGTTGGGGTACAAGTTGTTGTAGTTGTAGTGGTTGTAGTCGTTGTGGTGGT TGTGGTCGTGGTGGTGGTTGTGGTTGTGGTAGTCGTGGTTGTCGTAGTTGTTGGGGTACAAGTTG TTGTAGTTGTAGTGGTTGTAGTCGTTGTGGTGGTTGTGGTCGTGGTGGTGGTTGTGGTTGTGGTA GTCGTTGTTGTCGTAGTTGTTGGGGTACACGTTGTTGTAGTTGTAGTGGTTGTAGTCGTTGTGGT GGTTGTGGTGGACGTGGTTGTCGTAGTTGTTGGGGTACAAGTTGTTGTTGTTGTTGTTGTTGATG CTGGTGTTGTCGTTGTAGATGTAATTATTCCTGAGCACGGAGTTT Right flanking sequence: Indices 21225963 -- 21226462 GAGTTGTTGTCGCTCCATTACATGGTTGGGCAGTGTCACGTACGGATTGCTGGGCCACTGGTTTA ACGACAACACCCTCAACGCAACCAGTATTATAGGTTACACAGCTGCGGATCTTGAAGTCATAGAA TTTGGGACAGGTATATTCCTTGGCAACGCCATTTTGGCACTCATAGAACCTGGAGCAACTGCCGG GTACCAGAGCACGAATTCCGTTGGCCTTGTTGCGACACAGAAGGTCGGAAACGCTGGCACCACTG GAGGTGCTTGCAAAAACTGCAATAAGCAGCAGGGCAAAAGCTGTGGAAGCAAAAAAAAGGGTGCT TTACAGAACCATTTGGATGCTTTGTCTATCCGTTTACCGTATACATTCCTCATGTCTGCAGTTGC TTCAAATTTACGTTCCTCAGACTGAGAAGGTACTGTGGCCATTTAGCGCTGATGGCTCCACTATT TATACTGCCAAAAAAATTTTCATTCACACAAATTCCCATTAACAA Found at i:21226592 original size:12 final size:13 Alignment explanation
Indices: 21226575--21226602 Score: 49 Period size: 13 Copynumber: 2.2 Consensus size: 13 21226565 TATTTGCTTA 21226575 TTTCTCG-TATTT 1 TTTCTCGTTATTT 21226587 TTTCTCGTTATTT 1 TTTCTCGTTATTT 21226600 TTT 1 TTT 21226603 GGTAAAATTA Statistics Matches: 15, Mismatches: 0, Indels: 1 0.94 0.00 0.06 Matches are distributed among these distances: 12 7 0.47 13 8 0.53 ACGTcount: A:0.07, C:0.14, G:0.07, T:0.71 Consensus pattern (13 bp): TTTCTCGTTATTT Left flanking sequence: Indices 21226075 -- 21226574 GATCTTGAAGTCATAGAATTTGGGACAGGTATATTCCTTGGCAACGCCATTTTGGCACTCATAGA ACCTGGAGCAACTGCCGGGTACCAGAGCACGAATTCCGTTGGCCTTGTTGCGACACAGAAGGTCG GAAACGCTGGCACCACTGGAGGTGCTTGCAAAAACTGCAATAAGCAGCAGGGCAAAAGCTGTGGA AGCAAAAAAAAGGGTGCTTTACAGAACCATTTGGATGCTTTGTCTATCCGTTTACCGTATACATT CCTCATGTCTGCAGTTGCTTCAAATTTACGTTCCTCAGACTGAGAAGGTACTGTGGCCATTTAGC GCTGATGGCTCCACTATTTATACTGCCAAAAAAATTTTCATTCACACAAATTCCCATTAACAAAT TGGTTAATGAAATTTTCCCAAGAATGCATTATTAGAAAGATCTGTATCACATTCACTGTTTTCAC AATCAATACAAGCTTTTACCATCAAGACTCTTCTCTATTTGCTTA Right flanking sequence: Indices 21226603 -- 21227102 GGTAAAATTACCATTTTAAGTTTAATTTTATCCAGTAAATAATTTTTTGATACAATCTTTTTCGT ACAGTATAGTATATAGAATAGTATTTTGTATAGTAAAATAAAATTTTTACACGAATAAAAATTAA AGCTCATATGGTAAAGCCGAATGTGTTATCAATCTTACTTATCTAAAGACAACATTTTGCCAAGT TAAAAGTAAGTAAATTAGTGATTCTTTTTGCAAACTTGAGTAATTGACAAATTTTTTAATAATAT GTAAAAATTAATTGCATAGAAGAAGATAATATAAGCTCTATTTGTATGTTTGATCAAATATTACC GGAAAGTAAAATCTTCCATTTACTGTACAAGTTACAATGGTTAGCTATTTATAGCTTTTAACGGC TCCACAGCTTCCGGACACACTTCTTGTTATCTATAAAATTTTGGTTATATTTTTTTTTTGGCACT TCGTTCTTTGATACCTGCCAGACAGCTGATATCAAACGAAATGAT Found at i:21226690 original size:12 final size:12 Alignment explanation
Indices: 21226673--21226702 Score: 39 Period size: 12 Copynumber: 2.5 Consensus size: 12 21226663 TTCGTACAGT 21226673 ATAGTATATAGA 1 ATAGTATATAGA * * * 21226685 ATAGTATTTTGT 1 ATAGTATATAGA 21226697 ATAGTA 1 ATAGTA 21226703 AAATAAAATT Statistics Matches: 15, Mismatches: 3, Indels: 0 0.83 0.17 0.00 Matches are distributed among these distances: 12 15 1.00 ACGTcount: A:0.40, C:0.00, G:0.17, T:0.43 Consensus pattern (12 bp): ATAGTATATAGA Left flanking sequence: Indices 21226173 -- 21226672 TTCCGTTGGCCTTGTTGCGACACAGAAGGTCGGAAACGCTGGCACCACTGGAGGTGCTTGCAAAA ACTGCAATAAGCAGCAGGGCAAAAGCTGTGGAAGCAAAAAAAAGGGTGCTTTACAGAACCATTTG GATGCTTTGTCTATCCGTTTACCGTATACATTCCTCATGTCTGCAGTTGCTTCAAATTTACGTTC CTCAGACTGAGAAGGTACTGTGGCCATTTAGCGCTGATGGCTCCACTATTTATACTGCCAAAAAA ATTTTCATTCACACAAATTCCCATTAACAAATTGGTTAATGAAATTTTCCCAAGAATGCATTATT AGAAAGATCTGTATCACATTCACTGTTTTCACAATCAATACAAGCTTTTACCATCAAGACTCTTC TCTATTTGCTTATTTCTCGTATTTTTTCTCGTTATTTTTTGGTAAAATTACCATTTTAAGTTTAA TTTTATCCAGTAAATAATTTTTTGATACAATCTTTTTCGTACAGT Right flanking sequence: Indices 21226703 -- 21227202 AAATAAAATTTTTACACGAATAAAAATTAAAGCTCATATGGTAAAGCCGAATGTGTTATCAATCT TACTTATCTAAAGACAACATTTTGCCAAGTTAAAAGTAAGTAAATTAGTGATTCTTTTTGCAAAC TTGAGTAATTGACAAATTTTTTAATAATATGTAAAAATTAATTGCATAGAAGAAGATAATATAAG CTCTATTTGTATGTTTGATCAAATATTACCGGAAAGTAAAATCTTCCATTTACTGTACAAGTTAC AATGGTTAGCTATTTATAGCTTTTAACGGCTCCACAGCTTCCGGACACACTTCTTGTTATCTATA AAATTTTGGTTATATTTTTTTTTTGGCACTTCGTTCTTTGATACCTGCCAGACAGCTGATATCAA ACGAAATGATAATTGATAAAGGTGAAAAAAGTTATTTTTAATTCTCAACACTGGTGGTTTCTAAT TGTGATCAAAGTTTACAAACAACTATAGGAAGAATAAGCTTTCTT Found at i:21229286 original size:11 final size:11 Alignment explanation
Indices: 21229263--21229286 Score: 34 Period size: 11 Copynumber: 2.2 Consensus size: 11 21229253 CTCTTCATAC * 21229263 TCTGTTGCCTT 1 TCTGTTGCATT * 21229274 TCTTTTGCATT 1 TCTGTTGCATT 21229285 TC 1 TC 21229287 AAGCAATTTA Statistics Matches: 11, Mismatches: 2, Indels: 0 0.85 0.15 0.00 Matches are distributed among these distances: 11 11 1.00 ACGTcount: A:0.04, C:0.25, G:0.12, T:0.58 Consensus pattern (11 bp): TCTGTTGCATT Left flanking sequence: Indices 21228763 -- 21229262 GTTAACGTAGGCGTGGCAGGAGGGACTGGTTGGCTTCTTCGGCACGCTCACATGGTAACGAAAAG TGGAAAACGGTGTCAAAGTCACCGACAAGAGCAGCACTAGCTGGCTGATGAAAGTTGCAGGGCGC GAAAAGTGGCAGCGATGAGTTGAAAATGTACGGTGGAACAACACCAACAACGCGACCTGACAACT TGAGACAAATTGAAGCGTTGTTTCTCTTTATAAGAGGAGTGTGGCATGCAGTAGCCTTTTGGGGT CGAAAGCGCTTGTCAACCAATAAAGTGCTAAAACTAGTTCGGTTTCAGTTCATGAATTCGCTAAC AAAAAAAAAGCAGCTACTACTAGCGGATGTGTCTTATATTTTAAGTAAATATATGACCTTTAAAG CAGAATTTAATTATTGAAATTATCTTTGCTTATGTATAAATCAAAATTAATTATTCATTGCTTTG TTGTGGTTCCAACTTTTTCATCCCGAAGCTAACGACTCTTCATAC Right flanking sequence: Indices 21229287 -- 21229786 AAGCAATTTACCTAAGCCTTGCTCACATCCCTTCAGTTTTCGCATCATAAACCGATCTATTTTCA CTCAGCCAACACGGCTTGGGTATTCCATATAAAAAGCGTCCAATCGGAAATCACTCAAATGCCCA ACAGAAATCCTTAAATTGCTTAAACCACAAGAAAAACAAACGCCAGAGAATAAAAGAGCACATCA TAGAGAGATGACAATGCCAGGCATCGGTTTAACAATCCTCGAGGCATTTTTTGGGCAAACAGACC GACACTTGGCTGCTCCTTTGGTATCCTTTGTGGTGGCTCCTGTCCTGCGAGTGTTGTAGTTTCTC TGGACCGCCGTTCTATGCAAAATGTCCGTGTCAAAAACAGGACTGAAAGGGCTAACAGTGATAGC TAGGATAGCAGGATACCAGTACACCGACTTGCTCGAATGTGGGGGAAGCCGAAGCAAAGCACATT AAGCCAAGAAAGAGGCTTCTGCGGAGTCGGTGGGAAAAATGGAGC Found at i:21229808 original size:15 final size:16 Alignment explanation
Indices: 21229784--21229814 Score: 48 Period size: 15 Copynumber: 2.0 Consensus size: 16 21229774 GGAAAAATGG * 21229784 AGCTGCAGTT-GAAGC 1 AGCGGCAGTTAGAAGC 21229799 AGCGGCAGTTAGAAGC 1 AGCGGCAGTTAGAAGC 21229815 TTAAAAGGGC Statistics Matches: 14, Mismatches: 1, Indels: 1 0.88 0.06 0.06 Matches are distributed among these distances: 15 9 0.64 16 5 0.36 ACGTcount: A:0.29, C:0.19, G:0.35, T:0.16 Consensus pattern (16 bp): AGCGGCAGTTAGAAGC Left flanking sequence: Indices 21229284 -- 21229783 TTCAAGCAATTTACCTAAGCCTTGCTCACATCCCTTCAGTTTTCGCATCATAAACCGATCTATTT TCACTCAGCCAACACGGCTTGGGTATTCCATATAAAAAGCGTCCAATCGGAAATCACTCAAATGC CCAACAGAAATCCTTAAATTGCTTAAACCACAAGAAAAACAAACGCCAGAGAATAAAAGAGCACA TCATAGAGAGATGACAATGCCAGGCATCGGTTTAACAATCCTCGAGGCATTTTTTGGGCAAACAG ACCGACACTTGGCTGCTCCTTTGGTATCCTTTGTGGTGGCTCCTGTCCTGCGAGTGTTGTAGTTT CTCTGGACCGCCGTTCTATGCAAAATGTCCGTGTCAAAAACAGGACTGAAAGGGCTAACAGTGAT AGCTAGGATAGCAGGATACCAGTACACCGACTTGCTCGAATGTGGGGGAAGCCGAAGCAAAGCAC ATTAAGCCAAGAAAGAGGCTTCTGCGGAGTCGGTGGGAAAAATGG Right flanking sequence: Indices 21229815 -- 21230314 TTAAAAGGGCTACAAAACTGCAGGCAAGAAGTCAAAAAGCATCACATACACTGACAAAAAGGGAA AAATTTTATTTATTTTGAAACCTATTTTGTTAGCAATATGTGCGCTTCTGCCGCTTTTTCGCCTT GATGGCCACACTCTGCTGTGTAATCATTAAACTAAATATTTTGATATACTTTTTGTTTCACTGCA GTCTGGGCACCTTTGTTGCTTTGTTTGTGTTGGTGCATTTGTCTTTTGGCCTCGCTTTTAATGTG TTTCGTGTGGTGGATTGAGGTGAGCTGCTTGTGTGGTGGCTGTTGTATAGTAGTTTCCCGCAGTT TCTGCTGGTGGCTTCACTTGTTTAATGATAGTTCCACAAAGGCAAATATGCACTCTCTAACACTC GCTTGGCTTTTACTCCGTCCACCAGCCCACTCAACCCCTTGGCCCAAGCCCACAGCATCCTTTTT TATCCGCGACCAGCAACTGGAGCGCAAAGTCAACAACCAAACAGC Found at i:21230400 original size:12 final size:12 Alignment explanation
Indices: 21230383--21230410 Score: 49 Period size: 12 Copynumber: 2.3 Consensus size: 12 21230373 AAAGAGCCCG * 21230383 GCCAAACAAAAC 1 GCCAAACAAAAA 21230395 GCCAAACAAAAA 1 GCCAAACAAAAA 21230407 GCCA 1 GCCA 21230411 CGCCAAAGTG Statistics Matches: 15, Mismatches: 1, Indels: 0 0.94 0.06 0.00 Matches are distributed among these distances: 12 15 1.00 ACGTcount: A:0.57, C:0.32, G:0.11, T:0.00 Consensus pattern (12 bp): GCCAAACAAAAA Left flanking sequence: Indices 21229883 -- 21230382 TTTTATTTATTTTGAAACCTATTTTGTTAGCAATATGTGCGCTTCTGCCGCTTTTTCGCCTTGAT GGCCACACTCTGCTGTGTAATCATTAAACTAAATATTTTGATATACTTTTTGTTTCACTGCAGTC TGGGCACCTTTGTTGCTTTGTTTGTGTTGGTGCATTTGTCTTTTGGCCTCGCTTTTAATGTGTTT CGTGTGGTGGATTGAGGTGAGCTGCTTGTGTGGTGGCTGTTGTATAGTAGTTTCCCGCAGTTTCT GCTGGTGGCTTCACTTGTTTAATGATAGTTCCACAAAGGCAAATATGCACTCTCTAACACTCGCT TGGCTTTTACTCCGTCCACCAGCCCACTCAACCCCTTGGCCCAAGCCCACAGCATCCTTTTTTAT CCGCGACCAGCAACTGGAGCGCAAAGTCAACAACCAAACAGCCTCGGTTAACGCCCGCAGAAAAG CGGCTGAAGCCCAAAAGAAGGCTAGAAAGGAAAGGAAAGAGCCCG Right flanking sequence: Indices 21230411 -- 21230910 CGCCAAAGTGTCAGGTGGGGGGGGGGAGGGGGCACGAGGGGTGCGCATAGGTGAACCATTTTTTC GTAGCGTATTAGCACACGATCGCCAAACAAAAGGTGTTGCATGCGTTTTTGCGGCCAGCTAAATG CATGGAAACGCCATTTGGCATTTGCACCTGCTACAGTGCACGAATGCCGAATGTGGTGACTGTAC CAAGTTAGTCGCAGAATGTCAAGTCAAATGGCTTTGACAGATGACGGTGTGAGAATTTCCATCGG TAACTGGGCAGAGGCAACGAGGTCATGTTAGTTTTTACCAAATCAACAGGACTTTCGAGGGACTT GCTGTGATGTCAAGGAATTTCCAAAACGTACAGTTGCATCAAAAATTGCTTGTTGGTATGCGAAG GGTATAAAGAATTGAAGAGAACATTTTAAAGAATTTTATTTAAAGGTTCTTCTTCTTCTCAAAAG GGTTTAAAGATAAGCCCGTATTCATTTAAAAGTCAAACGGAAAAT Found at i:21235899 original size:52 final size:52 Alignment explanation
Indices: 21235811--21235914 Score: 141 Period size: 52 Copynumber: 2.0 Consensus size: 52 21235801 AGAAAGATGA * * 21235811 GAAATGGCCGAAAGAAAATACGGTAAAATGTTAAGTATACGCCTAATACAAC 1 GAAATGGCCGAAAGAAAATACGGTAAAATATCAAGTATACGCCTAATACAAC * * * 21235863 GAAATGG-CGAAATGAAAATTATGG-GAAATATCAAGTATACGCCTAGTACAAC 1 GAAATGGCCGAAA-GAAAA-TACGGTAAAATATCAAGTATACGCCTAATACAAC 21235915 AATACGTCAA Statistics Matches: 45, Mismatches: 5, Indels: 4 0.83 0.09 0.07 Matches are distributed among these distances: 51 5 0.11 52 36 0.80 53 4 0.09 ACGTcount: A:0.45, C:0.14, G:0.20, T:0.20 Consensus pattern (52 bp): GAAATGGCCGAAAGAAAATACGGTAAAATATCAAGTATACGCCTAATACAAC Left flanking sequence: Indices 21235311 -- 21235810 AAATATTAGAATGCGGACCGAAGAAACCCAATGCTAAATCCCGATTTCAAAGCCGGAGACCCGAA AACCGTAGGGACACTCCCCAAGCGAAAACAAAACTAAAAGCTAGACAGATTTTTGCCTGATTACG CGCAGCATTCACTCCTATTTCCCCAACACAACAATGGGAAATGCACTTCGGTAGTGACTCCCAAA AGTATGGAATGAAATGGTGCGGGCCGAGAAAGGAAAATGGGGCAATCCATTGCAATGGTGGGAGG CAGCACGAACGAATGCGAACAAATTGATATGCAAATGTGAGTAGCAGACCCAGACCCAAAAAACG TAATAATAAAATAAAGTAGAACCCAAAGCACTGCGATGAGGGATGGAAAGGGGTTTCCATGGCGG TTAGATCCTTGGATAAATGCTCCATGACTTCTCATTTCCGTTTCGCCAGAAGCAGCAGCAGCTGC ATCTGGCAGGCAAATCTGCGTCTTCCGGTCCAACGAGAAAGATGA Right flanking sequence: Indices 21235915 -- 21236414 AATACGTCAATAACTTAACACACAAGTCTAGAGTTCTCAACGCGGCGCCGATTGAATTAAAAGAT TTTCTTGCGTTGCTGAAACGACCAACTTTTTTTTTGCACAAAATTGAATTTGCCCCAACTTTCTC CCTTTCTAATTTTTTTCCACCATCATCTTTTTCCCCATCATCAGCTGGCGGCCTTTTTAGTATGC GTTCGGATGCAGAAACAACTTTTCCCCCTCAGCCTCATCGATTGAAATGCTAAGGCATGTATCCA TCCGTATATATCTGTATTCACCCGATCTCCGAAAAGTTGGCCTTTGGCAAATTCAGTTGTTCAAC TAATGAGAGTCGCAGCTTTGCCTCGGGTCTTCATTCTGATGGACAAGCCAGATGAGTCGGGCAAA AGTCGTGACAGTCATAAAAAAAAAAGCAGGGAAAGAACTGGAAAATGCAAACGAAAACTTTAAAT GCCTTCGGTCAGTTGGCAAAATGTTCCTTTATCATGGGGGCAAGT Found at i:21236082 original size:15 final size:16 Alignment explanation
Indices: 21236056--21236086 Score: 55 Period size: 15 Copynumber: 2.0 Consensus size: 16 21236046 CTTTCTAATT 21236056 TTTTTCCACCATCATC 1 TTTTTCCACCATCATC 21236072 TTTTTCC-CCATCATC 1 TTTTTCCACCATCATC 21236087 AGCTGGCGGC Statistics Matches: 15, Mismatches: 0, Indels: 1 0.94 0.00 0.06 Matches are distributed among these distances: 15 8 0.53 16 7 0.47 ACGTcount: A:0.16, C:0.39, G:0.00, T:0.45 Consensus pattern (16 bp): TTTTTCCACCATCATC Left flanking sequence: Indices 21235556 -- 21236055 TGCAATGGTGGGAGGCAGCACGAACGAATGCGAACAAATTGATATGCAAATGTGAGTAGCAGACC CAGACCCAAAAAACGTAATAATAAAATAAAGTAGAACCCAAAGCACTGCGATGAGGGATGGAAAG GGGTTTCCATGGCGGTTAGATCCTTGGATAAATGCTCCATGACTTCTCATTTCCGTTTCGCCAGA AGCAGCAGCAGCTGCATCTGGCAGGCAAATCTGCGTCTTCCGGTCCAACGAGAAAGATGAGAAAT GGCCGAAAGAAAATACGGTAAAATGTTAAGTATACGCCTAATACAACGAAATGGCGAAATGAAAA TTATGGGAAATATCAAGTATACGCCTAGTACAACAATACGTCAATAACTTAACACACAAGTCTAG AGTTCTCAACGCGGCGCCGATTGAATTAAAAGATTTTCTTGCGTTGCTGAAACGACCAACTTTTT TTTTGCACAAAATTGAATTTGCCCCAACTTTCTCCCTTTCTAATT Right flanking sequence: Indices 21236087 -- 21236586 AGCTGGCGGCCTTTTTAGTATGCGTTCGGATGCAGAAACAACTTTTCCCCCTCAGCCTCATCGAT TGAAATGCTAAGGCATGTATCCATCCGTATATATCTGTATTCACCCGATCTCCGAAAAGTTGGCC TTTGGCAAATTCAGTTGTTCAACTAATGAGAGTCGCAGCTTTGCCTCGGGTCTTCATTCTGATGG ACAAGCCAGATGAGTCGGGCAAAAGTCGTGACAGTCATAAAAAAAAAAGCAGGGAAAGAACTGGA AAATGCAAACGAAAACTTTAAATGCCTTCGGTCAGTTGGCAAAATGTTCCTTTATCATGGGGGCA AGTGTGGCGGAAATTTTCGCGTCCACGAAATGGACCTTTTCACTCAGCATTTCGACGTTGTAATT TTGTTTCAACATAAAGTTTATAAAGGAATCATTAGCCGCTATATATATCAAGCTAAATTTAAAAA CTTTGTAAATTTAAACTTCTACGTAAGCGTGATGGCCTCAGAAAG Found at i:21237601 original size:16 final size:16 Alignment explanation
Indices: 21237570--21237601 Score: 43 Period size: 16 Copynumber: 2.0 Consensus size: 16 21237560 AATTTTGTGT * 21237570 TTATTAGAGCTGTTAA 1 TTATTAGAGCTATTAA * * 21237586 TTATTGGATCTATTAA 1 TTATTAGAGCTATTAA 21237602 CAGAAAAAAT Statistics Matches: 13, Mismatches: 3, Indels: 0 0.81 0.19 0.00 Matches are distributed among these distances: 16 13 1.00 ACGTcount: A:0.31, C:0.06, G:0.16, T:0.47 Consensus pattern (16 bp): TTATTAGAGCTATTAA Left flanking sequence: Indices 21237070 -- 21237569 TGCCTCTGGAGTGAGGATGCCGGAGGCTCAGGTTCAGTTTCAGATTCTGGCGTTGATTCTGTTTC AGATTGTGTCTGAGAATCCGGATCCGCAACTCGATTGGAAGCCAGACGAACGAGGAAAAGGCTTG GCGACAAAAAAGGATAACACACATCGCCATAACAATAAAACATAGGGAGGCCCTGCCTGCCTGCC TTCTTGTCTGACTGCCATCTGTTCTTTTCCGTTTTTTTTTTTTCTTAGTGTTTCGCCCTCTTCTT TCCAGCAGTATGTTTTCCTTTTCCCAGTTTTCCTTTGCTCCATTTTAAACAGTTTGCTGACTAGC ATAAATATGTTTGCGGCAGACATTTTCAGTATGTGGAAAATAAAAAAGGGGGCGTCTAATTGGCT CACTATTGTATTCTAAAGAAAACTTATTTTGTAGATTTAAATATTAGTACTTCAGACATTATAAT GAAAAACATTCTACGCGGAAAAATTCATACTCAAGAATTTTGTGT Right flanking sequence: Indices 21237602 -- 21238101 CAGAAAAAATTTCCAACTGCATTTAATGTCTATAAATTGACATCTTAAAAATATTTCAAATACTT TCAGCGGCTTTCTGGCTGCAATAATAAATTCCGAAGATCTCTCTAAGTTGCCCGCAAAATGACAT TAAAAACCAAGCGCAAACTTTTTGTTATTTTGCGGAATTCCCACTCGAACTAAGTTGGAAAATGC AAATGTTTGTCTTCGTAAATGACAAGAAGATGCTACAAATTACATAAATAAAAGCAATAAAGTGC CAACGCATTTGCATAAAGAGATGGGGGCGGGGCCGGAAATGGGATGTAAGAAACTTATGCTAAAC AATCCGAGACACAGTCGAGGGCGGTTTAGGCAGCTTAGTGGAAAACCCCCAGCAAACACAGGCAC ACATTCAATTACACATAAGATTCAGTTTACTTTCGCCTCGGGCACGCCCACAACATCAAAGGGCG TCATACTGACATTGATTTCTCTCTCCGGCTATTGAAGCAACTGTA Found at i:21240785 original size:12 final size:12 Alignment explanation
Indices: 21240754--21240778 Score: 36 Period size: 10 Copynumber: 2.2 Consensus size: 12 21240744 CTCTCCGGAC 21240754 ATAAACAA--CG 1 ATAAACAACGCG 21240764 ATAAACAACGCG 1 ATAAACAACGCG 21240776 ATA 1 ATA 21240779 GATAACGATG Statistics Matches: 13, Mismatches: 0, Indels: 2 0.87 0.00 0.13 Matches are distributed among these distances: 10 8 0.62 12 5 0.38 ACGTcount: A:0.56, C:0.20, G:0.12, T:0.12 Consensus pattern (12 bp): ATAAACAACGCG Left flanking sequence: Indices 21240254 -- 21240753 TCATGTTCATGTTCCCATCCTTTACAATTTTTCCACCATCGTTTCGTTGCGGTTCGGGCAATTAT AAAATCCACAAAGGGAATTGCCATGACGACAATCAACTAATGAAATTAATGGCATTTTGCATTGG CAGTATAAGCTTTTACATGGCAGTAGATGCAAATAATGCAATTTCGCGCAGTTTAAGCCCGGAAA TGCATTCCCCAGGAACTCAGAAGTGACCCCACCACTGGCCCCCGCAGCCATCCTCCTCAGTGGCC AAGGATATCGCACACAAACACTAATTAATCAGCTTGCTATTAATTAAACGACCGCCAAATGAGGC GAGGGATCCCAGGCGGGCTAACGATATCCATAATCCACACAGAAGTGGCTCTTTGCAGCCGAAGG GCTTTAATTGCCGCCTTGCATTTAAAACAGGAAACCTGCGACGCCGCAATTTGGAAATTATTCCG TGAAAATGGGGGAAATTTATGAACCTATTACTCGGCTCTCCGGAC Right flanking sequence: Indices 21240779 -- 21241278 GATAACGATGACCTGGTGGGTGGCGCATGCCAACTCGGTTTGCTGTTGGTGTATTAATTTACAAC CTCTTCACAATGTCATTGTTATGGCTTGCTGCTTTATCGAACCGCATTTTTTTTGCTCGTTTTTG TGCGAGTCCTTTTCACTTTTTTTTTTTGCGTCACACTCTGCAATGGCGCCACTGCCTAGCGCCTG TTATTAAACATAAAAATAAATTAATAAGCGAGCCACACACCCACAACCCCGACAATCTCAATTAA GCGCCGCAGTCATTTAATGCTGATGGAAGGGCGGAGGAAATGGCAGGGTGAGAGCCACGCAAATA TTTCAGCGATGCCATGTGAAGTTTTTCACGTTGTCAATGGCAAATTAAATGCACAGGGGGAGGGG GGGTGGCGGAAAAAGGGAGCACCCATAAGCCAAATGTATCATTAAGACCAGCATATGCAGCTGCA ATCAGAAATTATAAGTCAGAGGCCATTAAGTTAAATGTTCCGCAG Found at i:21248565 original size:12 final size:12 Alignment explanation
Indices: 21248550--21248573 Score: 41 Period size: 12 Copynumber: 2.0 Consensus size: 12 21248540 TGTCTAGCAG 21248550 TGTGTGTGTGTA 1 TGTGTGTGTGTA * 21248562 TGTGTGTTTGTA 1 TGTGTGTGTGTA 21248574 AGCTGTCAGA Statistics Matches: 11, Mismatches: 1, Indels: 0 0.92 0.08 0.00 Matches are distributed among these distances: 12 11 1.00 ACGTcount: A:0.08, C:0.00, G:0.38, T:0.54 Consensus pattern (12 bp): TGTGTGTGTGTA Left flanking sequence: Indices 21248050 -- 21248549 AGTAGGAAGTTCAATTAAATACTGCAGCATTCGGACAACTACAGTGGGATGGGTTTTCCAAAAGC CACACCATCATCATTTGGAGCTCCTTCATTCCTCCCAGACAGGTTAAATTTGATTATGTGGAGTA GCGAGCAGGGAAAACTTGTATGAAGTCTGAAAAGCAAATCTGTTGACGTTTTGCAAAACGATGTG TTGCTCTTTCAGCTTCTTCTGCATCTTCGTCTCGGGAAAACTGCAGGCTGGGCAATTTTCTTGCT TTTATGCAAACACAAGCGGAGCAGCAACAGCCGGATACCGGATACGCCCTTCCACCCAAGGGACA AACTAACCTAACCGGCAGTTAAATGTTTTCATTTTCATGCTTCTTCGCCAAAATGTTTATGGCGC CCAAGCATCGGGCAAACACTGAATTTATTTAATTAAAATGTGTGTATATGTGACGTGCACTCTGC CTAGATTCTAGAATCTAATTGAATTGCCAGCAGTATGTCTAGCAG Right flanking sequence: Indices 21248574 -- 21249073 AGCTGTCAGAGTGAGTAGACTAATATGCAGCGGAAAGAGAGGGAGAAAGGGTTTTTCAGGCCAAG CGGCACAAGTGTCAGGTGCCCTTTGGCTATATGCCATCCAAAATGCAAATTTTGAAAATTTTTTT TTTCAACTTTGAGGCCGCCTCTCCATTCCTTTTAATTAAAAAGTTTTTGTTTTCCTGTCGGATGG ATCATCACGATGTGAAATCTGCATGATTACCAAAGCTGAATGCATTTTTAACCATATGCAAAGCA ATTTCAATTCGGTTTTGTTAGATACTCCCACGTGTTAGCTGTCAATCAAAGTGGGAGCACTCATT GTTTTTTGAGTGCAGGAAAAACCTCTGTGGTCATTAAAATGCAGGCGATGGCAAAATAATGCATT TCAATGACAATGACATCACCAATTACAAAAACATGGCATGTCACTTAATTTGTATGCGTTGAGTG CAATTTTCACTAGTCAAATTTTCAATTGACAGACAGTTGCTGTCA Found at i:21251195 original size:12 final size:12 Alignment explanation
Indices: 21251172--21251195 Score: 34 Period size: 12 Copynumber: 2.0 Consensus size: 12 21251162 TCACGCAGCG * * 21251172 AGACAGACAGAC 1 AGACAAAAAGAC 21251184 AGACAAAAAGAC 1 AGACAAAAAGAC 21251196 CCAGAGTTGG Statistics Matches: 10, Mismatches: 2, Indels: 0 0.83 0.17 0.00 Matches are distributed among these distances: 12 10 1.00 ACGTcount: A:0.58, C:0.21, G:0.21, T:0.00 Consensus pattern (12 bp): AGACAAAAAGAC Left flanking sequence: Indices 21250672 -- 21251171 CACCCTGTATATATTCCTCATACAAACTGCTTCGTGCTGACAGAGATATGAGCGAAAAAAATTAA GTTCAATGAAATTAGGTCAACCTTCGTTTTGCAGTCCAAACCCAGCAGGCTCCTCTCTGCCCCCC CCCCTCGCTTACCCAGCACCGTCTACGATGGTGTGATAAAGGTAAATGTAAAAATATGACTAAAG ATAAGCATAAATCAGGGCATAAAGCAATTACGCAAAGGCATGGGCAAGGGAACTGCAGGGGCAGT TGGATAGATGTAAGTAGTTTCTACTTGAAGCATTATAAAACTATCAAAAGAATATCTTTTCAGCG ACTCTTTATTGTAAGACACTATAAACTTTAATTGTAATATCCTTTTTAAAAGGCTATTTACTTCT TTTGTACAAAAAGTTATAATACCCCATGGCAGGGCAAAAAGATACAAAGAGACAGGGACAAGTTA GTGCAACTTAGGTTGCCAGCAAAATGGTGACAAATTCACGCAGCG Right flanking sequence: Indices 21251196 -- 21251695 CCAGAGTTGGTTGTTTTGGGGGGGATGGGGTGAAATGGGGCGGGGTGGCGGAGGAAGTTAAGTAG GAAAGGCGGATGAGGCAACTAAATGTGCATGTTAAGGTTAGATAAGAGACACCAACGCAGACAGT TACCAGGATATTGTGAGTACTTTCCTGCTTTCATTTTTGTTATTTTCGGTTTTTTTTTTTGTCAT TTACTTTTGCACCTCCACCCGCTTTTGTTTGCTGCCCCAAGCAGCCAGCCAGCCACCAGGCAGAA GTCACTTCCAGTCGGCACACTAATGAGTAACTTATTCAATTATTTATTATTTTTTCTCCGCCAGA GCGGAAAATAATTTGCTTTTGCCCAGGCTAATTGGCGGAAGAAGAGGAAGTGCATTGGCCACGAG TAAAACTTGATAAAATGTCAGGGCGTGGTAATAAATAAATAATTTCAACTGTGTAATGTATGCAG CAAGCAGGAGGACAGCTAATTGAGTGCAAAATTTGTGGGTTAATT Found at i:21255762 original size:12 final size:13 Alignment explanation
Indices: 21255745--21255775 Score: 55 Period size: 12 Copynumber: 2.5 Consensus size: 13 21255735 AATATTTTCC 21255745 AAAGAAATATA-A 1 AAAGAAATATATA 21255757 AAAGAAATATATA 1 AAAGAAATATATA 21255770 AAAGAA 1 AAAGAA 21255776 CGAAATGTTC Statistics Matches: 18, Mismatches: 0, Indels: 1 0.95 0.00 0.05 Matches are distributed among these distances: 12 11 0.61 13 7 0.39 ACGTcount: A:0.74, C:0.00, G:0.10, T:0.16 Consensus pattern (13 bp): AAAGAAATATATA Left flanking sequence: Indices 21255245 -- 21255744 ACATTTGCCAATATGTTTTGAAGAAAATGGAAAAGGACGGATATTGGGGTAAAAAAGCTGGAGAC TGCTTCCATCAATTTGTATGTGTTTTTCGTGTGTGTCTCCTTTTGCGGGCGATTGAATTGGCATT TTAGTTGGGGCAGCTTTCTGCAACTACGAGGTCCTTTGCAGGACCAACAAACTCATCGGCATTTG CCAATTTGTGTGTCTCGCAGTCACTTTTTCACTGTATCTCACTGCTCTAGGCCCTTTTCTTTGAT TGCTTTAGCAGAAGGTTCAGTGCTGACTTGGTTATGCATGGGATTGCAACCAATAAGTTATACCT TGATTGCTTTTCCCATAACTTTTGCTTCTCCAGCGTGAAGTTGTGGACAAGAAAAACATAGTTGG CAAATGTGTTTCAACAGAAATTTATAAAAGAGCATTACGCAATTCTGGGCAACTCAATATTACAA ATAAAGTTGACTTTACAACATTTCTTTTTAATTAAAATATTTTCC Right flanking sequence: Indices 21255776 -- 21256275 CGAAATGTTCCTATTTCTAATATTTTCAGGTACATAAACATTGCATTTCCCCGAGTTTTTCCGCC TCAGATATCACAGGTTTTCCACCGCTGCCATCTTCTATCTATTCATCAGGACAAAATCTCTTTTG GGCTCATTTCCATTTACGGGATATCCCGAAATCTCCATTCACAGGCGAAGCCCAACGGAACTATC TACAAAATTATTACCATTCAGCCATCCTGGCCGGATTTCCATAACAAACATCAACCTGGGATAGT TGTATCCATTTTATTTGCTTGTATTTTATTTTTGCTTTGGGTCTCGTTGGCATGTCCATGCTCTA GAAAATATATATTGATATGACCGAAAACAGAGCACTAGTTTACAGGATGCATAACCCAAAAAAGG GCCACGCACACTCCTCCTCCCCTTTGTTAATGGTAACAAATCCCCGTTTGTCGGGCACTCGTAAA AGCCAGGACTAACGTTACCTGACTTTGGTTTTTGGTTTGTTTTGG Found at i:21261882 original size:13 final size:13 Alignment explanation
Indices: 21261864--21261891 Score: 49 Period size: 13 Copynumber: 2.2 Consensus size: 13 21261854 GGTCCTCCTC 21261864 TCATTTCTGGCTT 1 TCATTTCTGGCTT * 21261877 TCATTTTTGGCTT 1 TCATTTCTGGCTT 21261890 TC 1 TC 21261892 CCTGTTGGTT Statistics Matches: 14, Mismatches: 1, Indels: 0 0.93 0.07 0.00 Matches are distributed among these distances: 13 14 1.00 ACGTcount: A:0.07, C:0.21, G:0.14, T:0.57 Consensus pattern (13 bp): TCATTTCTGGCTT Left flanking sequence: Indices 21261364 -- 21261863 GCTCACACATATCCACATGCATGCTAATTTCAACTGCCCCGGAATCCGTCACAAAACCCAGTTTC TGGTCGAGTCTACAATGCCGAATGAGATTTTTGTGCAATGCCCTGTGTCCATCAAATTCATCACA CAGTAAACAATAAATGTTACGTGGTAAACAGAACAATGCTCACTCCTAAACTTGTTACTTAATTG CAGCACAATATATTATTCGAAATTTGGAACGATATATAAGTTCAATTAATTATCAAAACTAAAAT ATTACGAGAAATTCCAAAATAAAAACGAATTGAAATTGATCAAGCGTAAGTGAATGCCCTCAGAT GAAATGCTTCTAAAATTTATCTGAAATATAAATAAATACATATATTTTTATCTGCACTTTTAGGA CACAGATTAAGGGCTGTCTGGAAAACTGCAATGAAATTGGTACGACACGCATTATTTTTCATATG CCTGCCTGTTGTGGAATGAATCTGTGGCTGGCTTTGGTCCTCCTC Right flanking sequence: Indices 21261892 -- 21262391 CCTGTTGGTTTCATCTGTTTGCGGCTTTTATGCGAAATGGTTTTTTCCTGCCCGTTTGAGGGTGT TGTGCCTGTGCCTTTGGTTTGTAAGTGGGCAGAAAATTAACCACAATTATGATTTATTTTGCGGC GATATACAGGGTTTTCTTTAAATTGTCATAATTAAAAGGTTTTATTTAAAAAAGCTATGTTTTAT AACGTCTACTTAGAAGGAAAACTTCTTTAAACTATGTAACAAAATAAGTAAAAAGCTTCATGCAT GTTTTAAAGTTTTGATTATTTATCCTATGCTATTGACTTTGACAACGTGTAAACACCTATAGATA TTCTTTTGTGTCAAACACGAAGTTCTTTCACTTTTAAGACGTCTTCAATTAGTATTCAAAACCAT TTGCCAACAATTAAACATCAACGAGTTTATCAAAATTTGACTCACAAAATGGCAGGGCTGGGAAT CCAGAGTCAAGTCAATTGTCCTAATTAAATATTCTGACCGAAAAC Found at i:21262818 original size:21 final size:20 Alignment explanation
Indices: 21262768--21262818 Score: 61 Period size: 21 Copynumber: 2.4 Consensus size: 20 21262758 AAGAAGAAAG 21262768 AGGAAGAAAGTGGGGGAAAACT 1 AGGAA-AAA-TGGGGGAAAACT * 21262790 AGGAAAAATGGGTGAAAATCT 1 AGGAAAAATGGGGGAAAA-CT * 21262811 AGGCAAAA 1 AGGAAAAA 21262819 CAGGTCATAT Statistics Matches: 26, Mismatches: 2, Indels: 3 0.84 0.06 0.10 Matches are distributed among these distances: 20 9 0.35 21 12 0.46 22 5 0.19 ACGTcount: A:0.49, C:0.06, G:0.33, T:0.12 Consensus pattern (20 bp): AGGAAAAATGGGGGAAAACT Left flanking sequence: Indices 21262268 -- 21262767 GTATTCAAAACCATTTGCCAACAATTAAACATCAACGAGTTTATCAAAATTTGACTCACAAAATG GCAGGGCTGGGAATCCAGAGTCAAGTCAATTGTCCTAATTAAATATTCTGACCGAAAACCGAAAA GGTAGAAATGCTTTTCACCTCCTCGTTCGTTGCGAAAATGGAATTTTGCATGGCATCGATTTGAC AACCATCCTACATGACAACTGAGACACATCGAGGTCTGCTCATTTGTGCAGCAAAATCAGTGCAG GATACGTTTCAATGGAAATTGTTCTCCATTTGCACCACCTTCTCACCTGACAGTTTGCGGTGGAT TGGGCAAAAAATCGAATCGAATTGAACCGAACCAAACCGAAGGCTCTGCCTTTCCCCAAAGCAAT TGAAAATTATGCTGCTGTGGAAAACTTGAACAGGACTTGGAACTCAAGAGTGTTGAAGAAGATGC CGTCTCACATGCTCACATTGCAGGGCGTTTACAAGAAGAAGAAAG Right flanking sequence: Indices 21262819 -- 21263318 CAGGTCATATGGAAATTCGTTTAAAGTGATGTTTATTAATGCGGAATTTTTATGCCTTTAGAGCT TGGAGACTTTTCGAGAAATGCGTCAGCCAGGTTAAGATTATACAGTTTATACAAGATAGTTTTAG TTTTTTTGTTTCACTATTTTATTTGAGTGTAATTCTGTGCAGTGCCTGTTGTTAGTCAGACTAGT AAGAGATCAAAGCTCACTGACGAGCAGCTGGCTCCACTCCGCACACTCATCACTCATTCCACTCA AAATGCAAACTTCAAAAGCGATCTGTTGGGGATTCAATCTTCGCCATCGCTGGTTGCCGCCTTGG GGCTGCTTTAATTATACTTAAACATTTCAAGTTACACAATTCAATTGAGTGAGCCCCCAAACTGA CTTCTGACTGGCTGACCTTTCGGTGGAGCTGGTTGTGTCTGAAGCTAGAGGTTTATGAACATTTT TATCTACGAGCTGACATTGAAAAGTGCTTCATGGTCCGTTCACTT Found at i:21264635 original size:12 final size:13 Alignment explanation
Indices: 21264601--21264633 Score: 52 Period size: 12 Copynumber: 2.6 Consensus size: 13 21264591 ACATGCAGCA 21264601 AATTATAAATTAT 1 AATTATAAATTAT * 21264614 -ATAATAAATTAT 1 AATTATAAATTAT 21264626 AATTATAA 1 AATTATAA 21264634 TTGCGCTTGT Statistics Matches: 17, Mismatches: 2, Indels: 2 0.81 0.10 0.10 Matches are distributed among these distances: 12 11 0.65 13 6 0.35 ACGTcount: A:0.58, C:0.00, G:0.00, T:0.42 Consensus pattern (13 bp): AATTATAAATTAT Left flanking sequence: Indices 21264101 -- 21264600 AACGCTTACATTCGCAAACAATTGCACTGAACTTATCGCTCGCTCTCAAAAGTTGAACCGGCTAA GCACAAGGTCTAAACACAACTGAACCGAATGAGAACGTGTTTATTTGGCTTATCACTTAGCCGGG GGAAATTCTCTCGGCGATTTTGAGGGGAAATGTGAGTGGTTAGAATAAGCACAGAATTTCAAATA ATTACTGATAATCAATTGCGCGGGCTTATAATGATGATGAGCGGCTGATATTAATGCAATGCTCG GGCAGGTTATAAAATACGAAAACAAGGCATTGCAATTACGGAGCAAACAAAAGCCGAAACAGATG CAGTATTTTATAACTAACAGCGGAACAGCTGAAAATTGTGAAATTTATATATTATTATATATACT TTGTCTTATCTGCTAGCTTTTGGGATTTACAGAGGCTGAGGCTAACGTGGAACAGGTCGAAATGA TAAGACTCGAGAGATTCTGTACTATCAGTGCCTCCACATGCAGCA Right flanking sequence: Indices 21264634 -- 21265133 TTGCGCTTGTGGCATGCATGAGTTTACTGAACTTTTGCCTGACTTGCCAGGGAATGCGGTAATCG GAGCAATTAGCAGATACAAGATACGAGATACAGTTACGCAGATTCACGGGCTTTGCCCAACGAAT TTACAGAGTGCTAATGAAAACCAATCTGAAAGCTAAATTCGAATTTCATCCAAGGAATATTACAC TGAAAACAAATTGATTTCTAAAAATATGCGATTTAAAGTTTCATATTTATTTCTCAAACATCAGT TGGCTACATTTCTTACGATGTAATGTCTGCATGGAAAACGATGTTTACTCAAATACCGATGTTCG ACTTCTTCCCTAATGAACCTGGATAGGCTTCGATTTTCTGGGGCAATTCAATTAGCAGTTTTCCC ACTGTGACAGGAGCCCGTTTTTGCAGGTTCGTGTACAGTTATGTGCACTCAATTGAACGCTAATC GAAATGTTTATCATTTCCCTACTTATACCTGCTAAAAAATCACTC Found at i:21264741 original size:14 final size:15 Alignment explanation
Indices: 21264708--21264741 Score: 47 Period size: 14 Copynumber: 2.4 Consensus size: 15 21264698 GGAGCAATTA 21264708 GCAGATACAAGATAC 1 GCAGATACAAGATAC * 21264723 G-AGATAC-AGTTAC 1 GCAGATACAAGATAC 21264736 GCAGAT 1 GCAGAT 21264742 TCACGGGCTT Statistics Matches: 17, Mismatches: 1, Indels: 3 0.81 0.05 0.14 Matches are distributed among these distances: 13 6 0.35 14 10 0.59 15 1 0.06 ACGTcount: A:0.41, C:0.18, G:0.24, T:0.18 Consensus pattern (15 bp): GCAGATACAAGATAC Left flanking sequence: Indices 21264208 -- 21264707 ATTTGGCTTATCACTTAGCCGGGGGAAATTCTCTCGGCGATTTTGAGGGGAAATGTGAGTGGTTA GAATAAGCACAGAATTTCAAATAATTACTGATAATCAATTGCGCGGGCTTATAATGATGATGAGC GGCTGATATTAATGCAATGCTCGGGCAGGTTATAAAATACGAAAACAAGGCATTGCAATTACGGA GCAAACAAAAGCCGAAACAGATGCAGTATTTTATAACTAACAGCGGAACAGCTGAAAATTGTGAA ATTTATATATTATTATATATACTTTGTCTTATCTGCTAGCTTTTGGGATTTACAGAGGCTGAGGC TAACGTGGAACAGGTCGAAATGATAAGACTCGAGAGATTCTGTACTATCAGTGCCTCCACATGCA GCAAATTATAAATTATATAATAAATTATAATTATAATTGCGCTTGTGGCATGCATGAGTTTACTG AACTTTTGCCTGACTTGCCAGGGAATGCGGTAATCGGAGCAATTA Right flanking sequence: Indices 21264742 -- 21265241 TCACGGGCTTTGCCCAACGAATTTACAGAGTGCTAATGAAAACCAATCTGAAAGCTAAATTCGAA TTTCATCCAAGGAATATTACACTGAAAACAAATTGATTTCTAAAAATATGCGATTTAAAGTTTCA TATTTATTTCTCAAACATCAGTTGGCTACATTTCTTACGATGTAATGTCTGCATGGAAAACGATG TTTACTCAAATACCGATGTTCGACTTCTTCCCTAATGAACCTGGATAGGCTTCGATTTTCTGGGG CAATTCAATTAGCAGTTTTCCCACTGTGACAGGAGCCCGTTTTTGCAGGTTCGTGTACAGTTATG TGCACTCAATTGAACGCTAATCGAAATGTTTATCATTTCCCTACTTATACCTGCTAAAAAATCAC TCGAACACGAAGTGCGGTTTAGATTTTTTAGTAATTACCACAGGGAAAACTAAGTGGGCGTCGTT GAGCTGGGCTAAAAATTATCACGATGCCACTAAGCACTTTTGAGC Found at i:21271817 original size:12 final size:12 Alignment explanation
Indices: 21271796--21271827 Score: 57 Period size: 12 Copynumber: 2.7 Consensus size: 12 21271786 GTCGCCGCCA 21271796 CAACAGCAACAT 1 CAACAGCAACAT * 21271808 CAACATCAACAT 1 CAACAGCAACAT 21271820 CAACAGCA 1 CAACAGCA 21271828 GCAACATGAG Statistics Matches: 18, Mismatches: 2, Indels: 0 0.90 0.10 0.00 Matches are distributed among these distances: 12 18 1.00 ACGTcount: A:0.50, C:0.34, G:0.06, T:0.09 Consensus pattern (12 bp): CAACAGCAACAT Left flanking sequence: Indices 21271296 -- 21271795 GGAGCGAGAAAGAAATTCAAATTAAAACAACTTGACAATTGGCTGTGTCTGTGTATTTTTGGATA CACTGAGAGAAAATATAAAGAAGTTTCAAGTTTTATAAAAAAAAAATTACTTTTAATGGGAAGTT AGTAATCAGCTAACACTTTAAACAATTTAAAAAAAAATTCTTTAAATGTGTTTAAGTGTTTTTTC ACAATTTCAATACTAAATTCTAGATTTTCGAACCGAATTGGTGCTGTGCGTAGCATATGCAAGTC GAAGCGGTGAATTGAGGCCTTTGCTGCCGTTTATGGTGCAAATGACAAGTCTATGTACATACTGT CGGCATGTAATCAACATTAATGTTGCCAGCGAGCAGTTGCCAGGCGAATGAATGAATGAATGAAT CACTTTGTCCACGACTCGAACACACTGCACTTCCAAACACGCAGTGAGAAAGAGATAGCCTGCGG GGGCGAGGGAGACGGGGTAAGCAACTGCAGCTGCCGTCGCCGCCA Right flanking sequence: Indices 21271828 -- 21272327 GCAACATGAGCCGATGCTCATCACTAGCAACATTATTACAAACATGCTCGATGCATTGCACAGTG GGGCAAGAAAGCATCAAAGGGGGGTCAATAAATTAAATGCGTGTGCAGTAACCAAACTTTTTATA AAAATAAATAACGTTTTTATTGCAGTTAACGGTTAAAATGAACTTTCATCATTTTTTTTATTGCA CTAACGATTAACTTTTATTGATAGATAAACGACCAAATTTCGAAAGACACTCCTGACCCATAGTC TCATCCCGCTGGCTAATTTAAGTGATGAATATCACTGTGAGCGGGGCTGTAACCACAGCAGTGGT GCAGCTGATGCTGATACTGAAGCTGGATCTGGTGGTGGTGGTGCCGCTGCTGCTGTTGCAGTTGC CGCTACTATGCGCTGCTCCGCCTCCACTCCGCCGCCCGGCACTCCGACTCCGCACCCACTGACGC CAGCAGGCACTTGTCTGGCTGACATTAATAAATCGCTTTTATAGC Found at i:21280750 original size:12 final size:12 Alignment explanation
Indices: 21280733--21280756 Score: 41 Period size: 12 Copynumber: 2.0 Consensus size: 12 21280723 ATCTTTAACT * 21280733 ATGTGCCATATG 1 ATGTGCCAAATG 21280745 ATGTGCCAAATG 1 ATGTGCCAAATG 21280757 TTGAGAAAAA Statistics Matches: 11, Mismatches: 1, Indels: 0 0.92 0.08 0.00 Matches are distributed among these distances: 12 11 1.00 ACGTcount: A:0.29, C:0.17, G:0.25, T:0.29 Consensus pattern (12 bp): ATGTGCCAAATG Left flanking sequence: Indices 21280233 -- 21280732 GTCGGAGATTATTGTTAAATTTTCTGAAACTATATGCTTTATTTTTCCGACTTTTTTCCCTCATC TGCTTGACCAGTTCATCTTTCTCGAGTAACACAAAAATAACATGAGCCCAAGTTTCCATTTTTTT TTTTTTTTTTTTTTTTTTTTTGTCTCAATGCCATAAGAAAAACTTTCAACAAAACAATAAAAATT TCATGCCTGTAAGGCCCTTGACTCTCACCCCATTCGACACTCCTCTTCACTTTCTCTCTCGATAT CTTCTTATATTTCTACCCCCTATATGTCGAACCTCTTAACGTTTCCAGAATGTTTGGGGTTGTGG CTCGGTTGTTACCACTCTTGGGGGGCGGAATACAATATTAAAGCTGCTTAAAATCATGATTACAG TACATACTTGGCTGCCAATGTATGTATTTGTATTTCTATACCGATGCGATGCATATAAAATGTGC TGGCGACCATAACAATGGCGACAAGCAGCAACAAAATCTTTAACT Right flanking sequence: Indices 21280757 -- 21281256 TTGAGAAAAATGCCAAAACAAAATTAAGTAGGAATGAGCAACTTAATAATTTAAAAAGGTTATTC GAATAACGTATTGTCCTATTAAATATAAAGTCATTTTATACACGCAACTTTTGTGATCAACATAT TTTCAAAACCATTGTGAAATTGTTTTTAAGTAATTCTATTGTACAAGATTTTATAAAACATGAAT ATTATTGCTGTTGAAAATTGTTGAACCTATCACTGATATTAAGAAGTATCAAGCTCGTCTATAGC CAAATCGAAATGTTTTTGACTTGGTCATGGCCGCCGACAGCTTGCTGCTCCTTTTTTTCAGCTGT TGTTATCATACGCCGAAATAAATGAGTTTTCGGCCAGAACGAGTAAAGGCCAGAAGAACCCGCTG AAAGATTGCCAGCCGACGAAGAGGAAGAGTAAATCTTGGCCTTTATTGGTTCAATATTCACTGGA GTTTCGCTCTATATGTCATCAAAGATATACTTCTTGGGGAATCCA Found at i:21281282 original size:12 final size:12 Alignment explanation
Indices: 21281259--21281282 Score: 34 Period size: 12 Copynumber: 2.0 Consensus size: 12 21281249 GGAATCCATT * 21281259 CATATTTATGTA 1 CATATGTATGTA * 21281271 CATATGTGTGTA 1 CATATGTATGTA 21281283 TGCCCACATG Statistics Matches: 10, Mismatches: 2, Indels: 0 0.83 0.17 0.00 Matches are distributed among these distances: 12 10 1.00 ACGTcount: A:0.29, C:0.08, G:0.17, T:0.46 Consensus pattern (12 bp): CATATGTATGTA Left flanking sequence: Indices 21280759 -- 21281258 GAGAAAAATGCCAAAACAAAATTAAGTAGGAATGAGCAACTTAATAATTTAAAAAGGTTATTCGA ATAACGTATTGTCCTATTAAATATAAAGTCATTTTATACACGCAACTTTTGTGATCAACATATTT TCAAAACCATTGTGAAATTGTTTTTAAGTAATTCTATTGTACAAGATTTTATAAAACATGAATAT TATTGCTGTTGAAAATTGTTGAACCTATCACTGATATTAAGAAGTATCAAGCTCGTCTATAGCCA AATCGAAATGTTTTTGACTTGGTCATGGCCGCCGACAGCTTGCTGCTCCTTTTTTTCAGCTGTTG TTATCATACGCCGAAATAAATGAGTTTTCGGCCAGAACGAGTAAAGGCCAGAAGAACCCGCTGAA AGATTGCCAGCCGACGAAGAGGAAGAGTAAATCTTGGCCTTTATTGGTTCAATATTCACTGGAGT TTCGCTCTATATGTCATCAAAGATATACTTCTTGGGGAATCCATT Right flanking sequence: Indices 21281283 -- 21281782 TGCCCACATGAGTGTATTGTACATACTTATATACTTGTTAGGTGCTTGTTAGCCAAACTTTTTTT TTCGGTCCGCTTAAGTTTGCTGATGCTCCGTCGCTGTTATCGCATTTATTATGCCAATTTTGGCA CACAATCCCCTTTGCCGTTGTTATATAAGAAAGTTAAATTGCGTAGAAATTCTAGTCGCGTCGGG TGAGCAGCCCCCTTTTCCATAGTTTATTTATTTTATGATGTGCATGTTGTTGATTTTTATTTTAT TAGACCTTCTTGTCGTCTGTCCATTTTTTTTTAGCTTTTTGGCAAGGGGTCTGCGGCTTGTTATT CTAACCAAATTGTGGTCAATGAATTTTATTGGGTTTCCCGTCGTCGAAATTAGATTATATTTCCC ATTACATTGTTCTCTAATTAGTGTGCGAAAAGTTTTCGAACAGATATGATTGATAGCATCGAATT GAGTTTTATTTCTTATCATATTTATAGGCATCATGTTTTTACCAC Found at i:21283870 original size:11 final size:11 Alignment explanation
Indices: 21283851--21283884 Score: 52 Period size: 11 Copynumber: 3.0 Consensus size: 11 21283841 ACTTCCGGTT * 21283851 AAAACAAAACA 1 AAAAAAAAACA 21283862 AAAAAAAAACA 1 AAAAAAAAACA 21283873 AAAACAAAAACA 1 AAAA-AAAAACA 21283885 TAACCGGGAA Statistics Matches: 21, Mismatches: 1, Indels: 1 0.91 0.04 0.04 Matches are distributed among these distances: 11 14 0.67 12 7 0.33 ACGTcount: A:0.85, C:0.15, G:0.00, T:0.00 Consensus pattern (11 bp): AAAAAAAAACA Left flanking sequence: Indices 21283351 -- 21283850 GAAATACTAATAACAAATTTGGTGGTTGGCCGCGTTTTTATTTTTTTTCGTTATCTGAGTACTTT TCCAAAATACAAAATGGGTTCTTATTTCGGAGTTTATTGTCGTTCTTTCATAATTAAGGCATCAT AGTTATCTGTTAAGTATACATACTTATCAGACTGCTCATAACTAAGATGAAATTACAAATAAACA TTAAACCATTGAGAAATGCATAAATAAGTGTGCTCTTATTTAATTTCCATATTTGCATGCAACGT ATTAGCATTTCTAATCAATTATGCAAATTGAATGCGAAAACATGCAATTAATGAATTGAAGACTC CATTATTCAATGTCCATAAATTTGTATAATAATTCAATTGATTAATTAAAGAAGTACTATTCCCG TCAGCTGTAGAAAAAAGCGCTCGTGGGCTTAACTTTAAAAGCTTATCGTTGAATGCAACACAAAT TCATCAGTTCATTAATTAAATTAAGTCAAAGAAAAACTTCCGGTT Right flanking sequence: Indices 21283885 -- 21284384 TAACCGGGAAAACAAACAATGTGAAACCACATATATTAAGCGGCAAGTGAACCCGAACCCTTTTG ATATGATTTACAGACATGCCCGGGGGCATCAGACTGACCCATTCCGTGGACCCCTTTTGGAAATC CCCAACCCACAAAGGAATTAGTTAGCTGGATCCTAAGCCATCCGGCTGTAAGGGTTTAAGGTGGG TCAGCTAATGATTTCATTGGGGATGAGGCGAGTAGAATTAAATTGAGAATATGATGAAACTGATA TTCTCTTAGCTTCAGAGTTGCCATTCGATTTCATAAAGTTTACAATTTCAAAACACACTAAACAT TTAGAAACATTGTATTTATTTCTTATAAATTTATTTATTTCACATTTAAATGTTATTCCAAACAA TTGACCAGTACTAAAATACCCGCCAAAGGCAACGTAGTGGTCCCTAATTAGGCTCTCATTCAAAT TCTCAGTTCTAACTTTATTTGGTTTTGCGCACAATATGAAAATGC Found at i:21284256 original size:15 final size:15 Alignment explanation
Indices: 21284223--21284257 Score: 42 Period size: 15 Copynumber: 2.3 Consensus size: 15 21284213 GAAACATTGT * * 21284223 ATTTATTTCTTATAA 1 ATTTATTTATTACAA * * 21284238 ATTTATTTATTTCAC 1 ATTTATTTATTACAA 21284253 ATTTA 1 ATTTA 21284258 AATGTTATTC Statistics Matches: 16, Mismatches: 4, Indels: 0 0.80 0.20 0.00 Matches are distributed among these distances: 15 16 1.00 ACGTcount: A:0.31, C:0.09, G:0.00, T:0.60 Consensus pattern (15 bp): ATTTATTTATTACAA Left flanking sequence: Indices 21283723 -- 21284222 AAAGAAGTACTATTCCCGTCAGCTGTAGAAAAAAGCGCTCGTGGGCTTAACTTTAAAAGCTTATC GTTGAATGCAACACAAATTCATCAGTTCATTAATTAAATTAAGTCAAAGAAAAACTTCCGGTTAA AACAAAACAAAAAAAAAACAAAAACAAAAACATAACCGGGAAAACAAACAATGTGAAACCACATA TATTAAGCGGCAAGTGAACCCGAACCCTTTTGATATGATTTACAGACATGCCCGGGGGCATCAGA CTGACCCATTCCGTGGACCCCTTTTGGAAATCCCCAACCCACAAAGGAATTAGTTAGCTGGATCC TAAGCCATCCGGCTGTAAGGGTTTAAGGTGGGTCAGCTAATGATTTCATTGGGGATGAGGCGAGT AGAATTAAATTGAGAATATGATGAAACTGATATTCTCTTAGCTTCAGAGTTGCCATTCGATTTCA TAAAGTTTACAATTTCAAAACACACTAAACATTTAGAAACATTGT Right flanking sequence: Indices 21284258 -- 21284757 AATGTTATTCCAAACAATTGACCAGTACTAAAATACCCGCCAAAGGCAACGTAGTGGTCCCTAAT TAGGCTCTCATTCAAATTCTCAGTTCTAACTTTATTTGGTTTTGCGCACAATATGAAAATGCCAG ACAACCACTGATAATGATGTTAATGTCTGTTATAATCATTAACCTAATGAATACGATTATGATGA TGATTTTGGCCAGGAGCCAAAGGCCCTAACAGGAAATTCCAATTTGTTTTTATTTGCTTCTGCTT TCTGTGAAATCTTCACTTTGAATTTTGAATTTATGCCGGCAAATTATGACGGAAGCTTTTCCGTT GCTTTAAAATGTTGAATTCCACTTTCCGCAATTTTGATGGCAAATTTTCCGTTTGATGAACATTT TGTATTTGAATCTCGAGTGTGAGATTCGGTTGGTGTTGAATTTTACACTTCATTCTCGCTGCCAG CTATGGGAATCATTTTAGCATTTTAATGGTTCAAATGTCCCCTTT Found at i:21288013 original size:12 final size:12 Alignment explanation
Indices: 21287989--21288013 Score: 36 Period size: 12 Copynumber: 2.1 Consensus size: 12 21287979 CAACCGGAGC ** 21287989 CAAGGAAGCTAA 1 CAAGGAAAATAA 21288001 CAAGGAAAATAA 1 CAAGGAAAATAA 21288013 C 1 C 21288014 CCAAGCTAGA Statistics Matches: 11, Mismatches: 2, Indels: 0 0.85 0.15 0.00 Matches are distributed among these distances: 12 11 1.00 ACGTcount: A:0.56, C:0.16, G:0.20, T:0.08 Consensus pattern (12 bp): CAAGGAAAATAA Left flanking sequence: Indices 21287489 -- 21287988 GTCGGCATTACTAACAAACGAAGCCGAAACTCGAATACCCTATAGAAGACATAACTAAAGGTTAA AATGTACACATATCGTAGTTAAAAAATATTTAACTAAATTAATACCTTTTTCCTCGGAAATCAAA TTTATTTTTGGGAATTCATAACCCCCATAAGCAAGAGTATATGTAGCAATGCACATGAAACGAGG ACAACCGAGAAGATTATCATACGGGAAACGACTGCAAGCGGAGATTTGGCAGAGAAAGAAACGCC AAAGACTTGGCCAAACAAAGGCATATTTAAATGTTATTCTGGCCAAACATTTGGAGTGGAAGCTT GCCAGTCTGCAGAACCAGTGGGGCACTTGCAACAGCAACAGCAAATGCAACGGCAGCAATGCAGC AACAACCTCGACTAGCTCGCAACTGGCAACTCCTTTTGGGCTGTTAATTTGCCAAACAATTGGCA GATAGCCAGGCCAACGGAGAGACCAAAAGTCGAACCAACCGGAGC Right flanking sequence: Indices 21288014 -- 21288513 CCAAGCTAGACGGGATGACGACGATGTTGCTGCAGCATTGCAAGCTTAAGACCTTGTTGCAGTTG CATATTTTGGCGTTGCACGTTTTGCTTGTTGCTGCTGCTGTTGCTTTCGCTGCCACGCAGCCCGC ACAGTAAATATGCCAAAAGCCAGAGCCCGCGAGGCGAAGAAGTTAAAGCGGCCCCAGACACAATC ATCCAGAGCCCGGGCTCATCCAGCAGGGACTCCTCCGCCGTTTAGACCCTTCGCCCTTTTGGCCA TAAACGAGTTGCTCCCCAGCGCTGGCGGAATAACAAACATTTCAAAAAGCCAGACCCCGACTTCA AAAACTGCAAAACTTGATTTACAAAAACAAGAAGAACGCTCTACTGTGGCAAAACAACAAAAAAC TACAGATGCTCTACGACGAGGTAGTCATGGTAAATAAACCAAAACAAACCGCTAATAAAGTAATT TTTTGGAAACAAATAATAGCATAGGAAAATGCTAACATAATTAAA Found at i:21290883 original size:21 final size:21 Alignment explanation
Indices: 21290859--21290899 Score: 75 Period size: 21 Copynumber: 2.0 Consensus size: 21 21290849 TAATATTATT * 21290859 AAAAAGGAGTATCTTCAAAAC 1 AAAAAGAAGTATCTTCAAAAC 21290880 AAAAAGAAGTATCTTCAAAA 1 AAAAAGAAGTATCTTCAAAA 21290900 GTATCTTCAA Statistics Matches: 19, Mismatches: 1, Indels: 0 0.95 0.05 0.00 Matches are distributed among these distances: 21 19 1.00 ACGTcount: A:0.56, C:0.12, G:0.12, T:0.20 Consensus pattern (21 bp): AAAAAGAAGTATCTTCAAAAC Left flanking sequence: Indices 21290359 -- 21290858 AAGCTTATGCAGAGAAGTCGAGCATATTCGTACACTAAAAAATACTTATATTATTAAAAAAAAAA CTCATTAATCTCATTACATTTACCTTACCAACGGAAAGTCTTTCACAATATTTTATACTTTTATA TACTTATTTTTGTATACTTAAGAACTCCATATCGAGTGCAAACTGTTTATCATAATTACGAGATC CGACAAAGTGTCAAAGGACAGCCTCAAAAAGCCAACAATGATGCCATTTAACTGCAAAGAGGATT CACCCAGCGAATGTGTATACATGTGTATTTATAAAATAGCGTGTGCTCTGTCTGCCGAGTTAAAG TTGACAACTCTTTTGACACCGCTGTAGGCGGGGGCGTGGCAAAATGTCACAAAAGTTGCGAAAAG TTGTTTGCCCAGAGGGAAAATGTATTTTTAAACAGGCCAGCAAAATAAATATATGTTTTTCACAT TTAAAAATGAACAATTTTACTACGAATGATGAAAGTAATATTATT Right flanking sequence: Indices 21290900 -- 21291399 GTATCTTCAAAAAAGCAGTAACTTCAAGATACTTTTTTTTAAAAGCGTATTCTTTTTGCCACAAT TTGACTTCCTTTAACCTCTTCGTTTATAATAATTTGAGCATAAAATGCAAGTCGAGTGCTGACGA CGATGATGATATCCTCGTTCGCCACTCGCCTCCTTTGACTTCCTGGCATCTTTATGTTCATCGCC TTCCATCAGCGAATAATAACGATTATTATTATTATAAACGCCTTTTCGAAAATGTTTGTCCTGGC TTGTCGCATTATTGTCAATAATGTGGCTCATTTGTGCGTCTTTCCATTCGCACAATGTGCTGCGA ACACTTTTCGATTTTTATGATCCTATCAATGTCCGCATTAAAGTGTAGTTAAAATGCATCTCAGT GGTTGCTGCAATATGGACACTCCATTGGGTGCCAAATGAAAAGACGCAACATAAAAATGTTTATA TTCTTCAACATTCTTGGCGTAAAATCCAATTAGCGTTGAAATATT Found at i:21290903 original size:12 final size:12 Alignment explanation
Indices: 21290886--21290911 Score: 52 Period size: 12 Copynumber: 2.2 Consensus size: 12 21290876 AAACAAAAAG 21290886 AAGTATCTTCAA 1 AAGTATCTTCAA 21290898 AAGTATCTTCAA 1 AAGTATCTTCAA 21290910 AA 1 AA 21290912 AAGCAGTAAC Statistics Matches: 14, Mismatches: 0, Indels: 0 1.00 0.00 0.00 Matches are distributed among these distances: 12 14 1.00 ACGTcount: A:0.46, C:0.15, G:0.08, T:0.31 Consensus pattern (12 bp): AAGTATCTTCAA Left flanking sequence: Indices 21290386 -- 21290885 TCGTACACTAAAAAATACTTATATTATTAAAAAAAAAACTCATTAATCTCATTACATTTACCTTA CCAACGGAAAGTCTTTCACAATATTTTATACTTTTATATACTTATTTTTGTATACTTAAGAACTC CATATCGAGTGCAAACTGTTTATCATAATTACGAGATCCGACAAAGTGTCAAAGGACAGCCTCAA AAAGCCAACAATGATGCCATTTAACTGCAAAGAGGATTCACCCAGCGAATGTGTATACATGTGTA TTTATAAAATAGCGTGTGCTCTGTCTGCCGAGTTAAAGTTGACAACTCTTTTGACACCGCTGTAG GCGGGGGCGTGGCAAAATGTCACAAAAGTTGCGAAAAGTTGTTTGCCCAGAGGGAAAATGTATTT TTAAACAGGCCAGCAAAATAAATATATGTTTTTCACATTTAAAAATGAACAATTTTACTACGAAT GATGAAAGTAATATTATTAAAAAGGAGTATCTTCAAAACAAAAAG Right flanking sequence: Indices 21290912 -- 21291411 AAGCAGTAACTTCAAGATACTTTTTTTTAAAAGCGTATTCTTTTTGCCACAATTTGACTTCCTTT AACCTCTTCGTTTATAATAATTTGAGCATAAAATGCAAGTCGAGTGCTGACGACGATGATGATAT CCTCGTTCGCCACTCGCCTCCTTTGACTTCCTGGCATCTTTATGTTCATCGCCTTCCATCAGCGA ATAATAACGATTATTATTATTATAAACGCCTTTTCGAAAATGTTTGTCCTGGCTTGTCGCATTAT TGTCAATAATGTGGCTCATTTGTGCGTCTTTCCATTCGCACAATGTGCTGCGAACACTTTTCGAT TTTTATGATCCTATCAATGTCCGCATTAAAGTGTAGTTAAAATGCATCTCAGTGGTTGCTGCAAT ATGGACACTCCATTGGGTGCCAAATGAAAAGACGCAACATAAAAATGTTTATATTCTTCAACATT CTTGGCGTAAAATCCAATTAGCGTTGAAATATTTAGTGACGTCTT Found at