Tandem Repeats Finder Program written by:
Gary Benson
Department of Biomathematical Sciences
Mount Sinai School of Medicine
Version 4.00
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: contig00000278 Parameters: 2 5 7 80 10 25 1000 Length: 2395

Tables:   1   

This is table  1  of  1  ( 36 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--19
1
17.0
1
100
0
34
0
100
0
0
0.00
25--48
3
8.0
3
80
0
34
4
33
37
25
1.75
92--108
3
5.7
3
100
0
34
29
35
35
0
1.58
107--149
3
14.7
3
82
4
58
0
37
30
32
1.58
219--262
3
14.7
3
90
0
74
31
34
34
0
1.58
341--370
3
9.7
3
85
7
37
40
33
23
0
1.55
436--471
3
12.3
3
75
16
28
22
33
36
8
1.84
486--518
3
11.0
3
80
0
45
39
30
27
3
1.72
543--566
3
7.7
3
81
9
25
12
29
33
25
1.92
617--636
3
6.7
3
100
0
40
30
35
35
0
1.58
641--666
3
8.7
3
91
0
45
3
34
30
30
1.76
731--769
3
13.0
3
88
0
64
35
30
33
0
1.58
828--859
3
10.7
3
93
0
57
34
31
34
0
1.58
888--908
3
7.0
3
100
0
42
33
33
33
0
1.58
918--930
3
4.3
3
100
0
26
0
30
38
30
1.58
967--1045
3
26.0
3
68
7
56
40
27
29
1
1.64
968--1049
21
4.0
21
70
7
80
42
28
26
1
1.63
1117--1149
3
10.7
3
93
6
57
33
30
36
0
1.58
1199--1250
3
17.3
3
72
7
39
28
30
32
7
1.85
1338--1380
3
14.0
3
90
4
70
34
32
30
0
1.58
1420--1436
5
3.2
5
91
8
25
0
41
35
23
1.55
1421--1436
3
5.7
3
85
14
25
0
37
37
25
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1475--1515
3
13.7
3
94
0
75
36
31
31
0
1.58
1582--1608
9
3.0
9
88
0
40
14
37
33
14
1.88
1586--1611
9
2.9
9
88
0
38
19
38
34
7
1.80
1586--1612
12
2.2
12
86
0
40
22
37
33
7
1.82
1586--1612
3
9.0
3
83
0
33
22
37
33
7
1.82
1646--1684
3
13.0
3
94
0
71
35
33
30
0
1.58
1750--1840
3
29.7
3
74
4
59
20
31
32
14
1.93
1746--1795
13
3.9
13
84
2
65
30
28
34
8
1.86
1760--1835
9
8.3
9
73
2
66
18
32
34
14
1.91
1943--1965
7
3.1
7
93
6
37
39
39
0
17
1.50
2053--2118
3
21.3
3
67
6
44
6
30
30
30
1.81
2134--2155
3
7.3
3
100
0
44
31
31
36
0
1.58
2276--2303
3
9.3
3
100
0
56
0
35
32
32
1.58
2315--2381
3
22.3
3
84
6
76
29
26
41
1
1.65

Tables:   1   

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