Tandem Repeats Finder Program written by:
Gary Benson
Department of Biomathematical Sciences
Mount Sinai School of Medicine
Version 4.00
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: contig00000153 Parameters: 2 5 7 80 10 25 1000 Length: 2483

Tables:   1   

This is table  1  of  1  ( 38 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42--56
6
2.5
6
100
0
30
0
80
0
20
0.72
72--180
3
36.0
3
77
1
132
0
31
29
38
1.57
72--180
15
7.2
15
89
2
153
0
31
29
38
1.57
242--276
6
5.8
6
82
0
42
17
34
37
11
1.85
245--270
3
8.7
3
82
0
38
23
34
38
3
1.73
241--284
3
15.0
3
80
4
32
13
34
34
18
1.90
329--341
5
2.6
5
100
0
26
61
23
15
0
1.33
368--393
7
3.7
7
94
0
45
11
0
50
38
1.39
431--458
7
4.0
7
85
0
42
10
3
46
39
1.56
533--565
3
11.0
3
93
0
45
42
33
24
0
1.55
610--631
7
3.1
7
100
0
44
18
0
40
40
1.50
690--823
3
44.7
3
71
5
117
1
32
35
30
1.67
871--918
7
6.6
7
83
7
64
16
2
37
39
1.61
956--987
7
4.6
7
76
0
36
18
3
34
43
1.66
1015--1047
16
2.1
16
82
0
45
72
12
9
6
1.26
1062--1089
7
4.0
7
100
0
56
42
42
0
14
1.45
1194--1243
3
16.7
3
76
0
44
8
32
38
22
1.83
1191--1243
12
4.7
12
68
13
50
9
32
37
20
1.85
1191--1243
15
3.5
15
71
0
64
9
32
37
20
1.85
1226--1274
9
5.3
9
73
11
45
20
34
34
10
1.86
1233--1264
3
10.7
3
70
12
27
25
37
31
6
1.81
1314--1357
7
6.3
7
100
0
88
45
40
0
13
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1314--1364
21
2.4
21
93
0
88
43
39
3
13
1.63
1393--1415
7
3.3
7
100
0
46
13
0
39
47
1.42
1473--1559
3
28.7
3
83
2
123
0
32
31
36
1.58
1625--1643
9
2.1
9
90
0
31
26
26
31
15
1.96
1652--1686
7
5.0
7
92
0
63
42
40
0
17
1.49
1864--1888
7
3.6
7
94
0
43
12
0
52
36
1.39
1969--1994
7
3.7
7
78
0
31
15
7
42
34
1.75
1973--2000
7
4.0
7
85
0
42
17
3
39
39
1.67
2033--2053
7
3.0
7
100
0
42
14
0
42
42
1.45
2166--2204
3
12.3
3
89
10
60
0
33
30
30
1.57
2166--2204
10
4.1
9
90
9
60
0
33
30
30
1.57
2166--2204
13
3.1
12
89
10
60
0
33
30
30
1.57
2296--2339
6
6.8
6
72
12
40
45
43
2
9
1.48
2283--2343
26
2.3
26
80
0
73
47
36
4
11
1.61
2296--2339
13
3.4
12
78
12
47
45
43
2
9
1.48
2401--2436
7
4.9
7
70
12
33
11
0
47
36
1.39

Tables:   1   

The End!