SAGE Suite

A complete suite for SAGE data manipulation

SAGE Suite is a free suite of Perl scripts for SAGE data analysis and in-silico data creation.

Institutions

USP - Universidade de São Paulo - University of São Paulo (in Portuguese).

ICB - USP Instituto de Ciências Biomédicas - Universidade de São Paulo (Institute of Biomedical Sciences - University of São Paulo)

IME - USP Instituto de Matemática e Estatística Universidade de São Paulo (Institute of Mathematics and Statistics - University of São Paulo).

Documentation:

Soon here will be hosted a on-line complete documentation of the SAGE GenSuite.

For now we have a short presentation (only in portugeuese for now) showing the basics of the GenSuite with examples and parameters explanation. At any module of the suite the parameter may be seen by using the -h parameter.

If you have any doubt fell free to mail us, we will be happy to help.

::Contact::

ChangeLogs (portuguese only, for now):

compareCounts.ChangeLog

extract_ditags.ChangeLog

expectedRealDitagFrequency.ChangeLog

counts2ditags.ChangeLog

ditags2concatamers.ChangeLog

tag_count_generator.ChangeLog

trim_tags.ChangeLog

sage_analysis.ChangeLog

separeDitags.ChangeLog

statsConcat.ChangeLog

extract_tags.ChangeLog