Page for EGene annotations

E. tenella EGene annotations

Sequences

FASTA sequence: Eten_0010
Eten_0010_ORFs: DNA, Protein

Annotation

Without ORF selection: FT, extended FT, GFF3
With ORF selection: FT, extended FT, GFF3

Orthology relations of the selected ORF

Evidences

Program ORF1 ORF2 ORF3 ORF4 ORF5
SignalP No hits No hits No hits No hits No hits

TMHMM No hits No hits No hits No hits No hits

Phobius No hits No hits No hits No hits No hits

DGPI Potential anchor cleavage site Potential anchor cleavage site Potential anchor cleavage site Potential anchor cleavage site No hits

BLAST No hits hypothetical protein, conserved No hits No hits No hits

RPS-BLAST No hits WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment No hits No hits No hits

InterProScan No hits IPR015943 IPR001680 IPR001632 IPR011046 No hits No hits No hits

GO terms No hits No hits No hits No hits No hits

KOG No hits KOG0271 - S Notchless-like WD40 repeat-containing protein No hits No hits No hits

eggNOG No hits KOG0271 - S Notchless-like WD40 repeat-containing protein|COG2319 - R FOG: WD40 repeat| No hits No hits No hits

KEGG No hits K14855 - ribosome assembly protein 4 No hits No hits No hits

Organism	Protein	Confidence value	Relation	KOG result
None	None	None	None	None

Program	ORF1	ORF2	ORF3	ORF4	ORF5
SignalP	No hits	No hits	No hits	No hits	No hits
TMHMM	No hits	No hits	No hits	No hits	No hits
Phobius	No hits	No hits	No hits	No hits	No hits
DGPI	Potential anchor cleavage site	Potential anchor cleavage site	Potential anchor cleavage site	Potential anchor cleavage site	No hits
BLAST	No hits	hypothetical protein, conserved	No hits	No hits	No hits
RPS-BLAST	No hits	WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment	No hits	No hits	No hits
InterProScan	No hits	IPR015943 IPR001680 IPR001632 IPR011046	No hits	No hits	No hits
GO terms	No hits	No hits	No hits	No hits	No hits
KOG	No hits	KOG0271 - S Notchless-like WD40 repeat-containing protein	No hits	No hits	No hits
eggNOG	No hits	KOG0271 - S Notchless-like WD40 repeat-containing protein\|COG2319 - R FOG: WD40 repeat\|	No hits	No hits	No hits
KEGG	No hits	K14855 - ribosome assembly protein 4	No hits	No hits	No hits